RNA–Protein interactions for RNA: ENST00000488217.1

TRIM50-203, Transcript of tripartite motif containing 50, humanhuman

TSL 2

Gene TRIM50, Length 548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50-203ENST00000488217 PCNTO95613 3336 aa20.05■□□□□ 0.8
TRIM50-203ENST00000488217 LDHDQ86WU2 507 aa20.05■□□□□ 0.8
TRIM50-203ENST00000488217 NECTIN2Q92692 538 aa20.05■□□□□ 0.8
TRIM50-203ENST00000488217 RUNDC1Q96C34 613 aa20.05■□□□□ 0.8
TRIM50-203ENST00000488217 HACL1Q9UJ83 578 aa20.05■□□□□ 0.8
TRIM50-203ENST00000488217 ADAMTS8Q9UP79 889 aa20.05■□□□□ 0.8
TRIM50-203ENST00000488217 ABCC12Q96J65 1359 aa20.05■□□□□ 0.8
TRIM50-203ENST00000488217 ZNF541Q9H0D2 1346 aa20.04■□□□□ 0.8
TRIM50-203ENST00000488217 TCERG1O14776 1098 aaKnown RBP20.04■□□□□ 0.8
TRIM50-203ENST00000488217 AIMP1Q12904 312 aaKnown RBP20.04■□□□□ 0.8
TRIM50-203ENST00000488217 C3orf67Q6ZVT6 689 aa20.04■□□□□ 0.8
TRIM50-203ENST00000488217 CREBZFQ9NS37 354 aa20.04■□□□□ 0.8
TRIM50-203ENST00000488217 TRIM35Q9UPQ4 493 aa20.04■□□□□ 0.8
TRIM50-203ENST00000488217 IBTKQ9P2D0 1353 aaPredicted RBP20.04■□□□□ 0.8
TRIM50-203ENST00000488217 COL11A2P13942 1736 aaPredicted RBP20.04■□□□□ 0.8
TRIM50-203ENST00000488217 WDR43Q15061 677 aaKnown RBP eCLIP20.03■□□□□ 0.8
TRIM50-203ENST00000488217 HSP90AB3PQ58FF7 597 aa20.03■□□□□ 0.8
TRIM50-203ENST00000488217 GPC2Q8N158 579 aa20.03■□□□□ 0.8
TRIM50-203ENST00000488217 XAGE3Q8WTP9 111 aa20.03■□□□□ 0.8
TRIM50-203ENST00000488217 TMX4Q9H1E5 349 aaPredicted RBP20.03■□□□□ 0.8
TRIM50-203ENST00000488217 CLEC11AQ9Y240 323 aa20.03■□□□□ 0.8
TRIM50-203ENST00000488217 LAS1LQ9Y4W2 734 aaKnown RBP20.03■□□□□ 0.8
TRIM50-203ENST00000488217 BCORQ6W2J9 1755 aa20.03■□□□□ 0.8
TRIM50-203ENST00000488217 FER1L6Q2WGJ9 1857 aa20.03■□□□□ 0.8
TRIM50-203ENST00000488217 WDR90Q96KV7 1748 aa20.02■□□□□ 0.8
TRIM50-203ENST00000488217 EPHX2P34913 555 aa20.02■□□□□ 0.8
TRIM50-203ENST00000488217 TCIRG1Q13488 830 aa20.02■□□□□ 0.8
TRIM50-203ENST00000488217 EAPPQ56P03 285 aaPredicted RBP20.02■□□□□ 0.8
TRIM50-203ENST00000488217 COL13A1Q5TAT6 717 aaPredicted RBP20.02■□□□□ 0.8
TRIM50-203ENST00000488217 PNMA8AQ86V59 439 aaPredicted RBP20.02■□□□□ 0.8
TRIM50-203ENST00000488217 DDX21Q9NR30 783 aaKnown RBP eCLIP20.02■□□□□ 0.8
TRIM50-203ENST00000488217 PPEF1O14829 653 aaPredicted RBP20.01■□□□□ 0.79
TRIM50-203ENST00000488217 BBOX1O75936 387 aa20.01■□□□□ 0.79
TRIM50-203ENST00000488217 ITGBL1O95965 494 aaPredicted RBP20.01■□□□□ 0.79
TRIM50-203ENST00000488217 EIF6P56537 245 aaKnown RBP20.01■□□□□ 0.79
TRIM50-203ENST00000488217 KRT24Q2M2I5 525 aa20■□□□□ 0.79
TRIM50-203ENST00000488217 NLRP10Q86W26 655 aa20■□□□□ 0.79
TRIM50-203ENST00000488217 LARGE2Q8N3Y3 721 aa20■□□□□ 0.79
TRIM50-203ENST00000488217 ATP6V0A2Q9Y487 856 aa20■□□□□ 0.79
TRIM50-203ENST00000488217 GJA3Q9Y6H8 435 aa19.99■□□□□ 0.79
TRIM50-203ENST00000488217 RIC1Q4ADV7 1423 aa19.99■□□□□ 0.79
TRIM50-203ENST00000488217 PASKQ96RG2 1323 aa19.99■□□□□ 0.79
TRIM50-203ENST00000488217 CCDC88AQ3V6T2 1871 aa19.99■□□□□ 0.79
TRIM50-203ENST00000488217 CNTROBQ8N137 903 aa19.98■□□□□ 0.79
TRIM50-203ENST00000488217 VPS33BQ9H267 617 aa19.98■□□□□ 0.79
TRIM50-203ENST00000488217 MKRN1Q9UHC7 482 aaKnown RBP19.98■□□□□ 0.79
TRIM50-203ENST00000488217 TRMT112Q9UI30 125 aaKnown RBP19.98■□□□□ 0.79
TRIM50-203ENST00000488217 RNF123Q5XPI4 1314 aa19.98■□□□□ 0.79
TRIM50-203ENST00000488217 HCLS1P14317 486 aaPredicted RBP19.97■□□□□ 0.79
TRIM50-203ENST00000488217 ANKRD13DQ6ZTN6 518 aa19.97■□□□□ 0.79
TRIM50-203ENST00000488217 SP8Q8IXZ3 490 aa19.97■□□□□ 0.79
TRIM50-203ENST00000488217 CFAP44Q96MT7 982 aa19.97■□□□□ 0.79
TRIM50-203ENST00000488217 KDM3BQ7LBC6 1761 aa19.96■□□□□ 0.79
TRIM50-203ENST00000488217 SNED1Q8TER0 1413 aa19.96■□□□□ 0.79
TRIM50-203ENST00000488217 TMEM88BA6NKF7 163 aa19.96■□□□□ 0.79
TRIM50-203ENST00000488217 HSPA1AP0DMV8 641 aaKnown RBP19.96■□□□□ 0.79
TRIM50-203ENST00000488217 HSPA1BP0DMV9 641 aaKnown RBP19.96■□□□□ 0.79
TRIM50-203ENST00000488217 CHPF2Q9P2E5 772 aa19.96■□□□□ 0.79
TRIM50-203ENST00000488217 HOXB7P09629 217 aa19.95■□□□□ 0.78
TRIM50-203ENST00000488217 HDGFL1Q5TGJ6 251 aa19.95■□□□□ 0.78
TRIM50-203ENST00000488217 MAP1SQ66K74 1059 aaPredicted RBP19.95■□□□□ 0.78
TRIM50-203ENST00000488217 DDX46Q7L014 1031 aaKnown RBP19.95■□□□□ 0.78
TRIM50-203ENST00000488217 SLC51AQ86UW1 340 aa19.95■□□□□ 0.78
TRIM50-203ENST00000488217 NIM1KQ8IY84 436 aa19.95■□□□□ 0.78
TRIM50-203ENST00000488217 PLBD2Q8NHP8 589 aa19.95■□□□□ 0.78
TRIM50-203ENST00000488217 PRKRIP1Q9H875 184 aaPredicted RBP19.95■□□□□ 0.78
TRIM50-203ENST00000488217 DBF4Q9UBU7 674 aaPredicted RBP19.95■□□□□ 0.78
TRIM50-203ENST00000488217 TIAM2Q8IVF5 1701 aa19.95■□□□□ 0.78
TRIM50-203ENST00000488217 SH3TC1Q8TE82 1336 aa19.95■□□□□ 0.78
TRIM50-203ENST00000488217 PPIP5K2O43314 1243 aa19.94■□□□□ 0.78
TRIM50-203ENST00000488217 LMOD1P29536 600 aaPredicted RBP19.94■□□□□ 0.78
TRIM50-203ENST00000488217 SUPT20HQ8NEM7 779 aa19.94■□□□□ 0.78
TRIM50-203ENST00000488217 RTFDC1Q9BY42 306 aaPredicted RBP19.94■□□□□ 0.78
TRIM50-203ENST00000488217 ABCC4O15439 1325 aa19.94■□□□□ 0.78
TRIM50-203ENST00000488217 DLG5Q8TDM6 1919 aa19.94■□□□□ 0.78
TRIM50-203ENST00000488217 DICER1Q9UPY3 1922 aaKnown RBP19.94■□□□□ 0.78
TRIM50-203ENST00000488217 DUSP27Q5VZP5 1158 aa19.93■□□□□ 0.78
TRIM50-203ENST00000488217 MPNDQ8N594 471 aa19.93■□□□□ 0.78
TRIM50-203ENST00000488217 HYPKQ9NX55 129 aa19.93■□□□□ 0.78
TRIM50-203ENST00000488217 ZNRF3Q9ULT6 936 aa19.93■□□□□ 0.78
TRIM50-203ENST00000488217 EPS15P42566 896 aa19.92■□□□□ 0.78
TRIM50-203ENST00000488217 SCNN1DP51172 638 aa19.92■□□□□ 0.78
TRIM50-203ENST00000488217 AOC3Q16853 763 aa19.92■□□□□ 0.78
TRIM50-203ENST00000488217 DPP8Q6V1X1 898 aaPredicted RBP19.92■□□□□ 0.78
TRIM50-203ENST00000488217 APAF1O14727 1248 aa19.91■□□□□ 0.78
TRIM50-203ENST00000488217 GRAPQ13588 217 aa19.91■□□□□ 0.78
TRIM50-203ENST00000488217 USP50Q70EL3 339 aaPredicted RBP19.91■□□□□ 0.78
TRIM50-203ENST00000488217 GRAPLQ8TC17 118 aaPredicted RBP19.91■□□□□ 0.78
TRIM50-203ENST00000488217 ZNF428Q96B54 188 aa19.91■□□□□ 0.78
TRIM50-203ENST00000488217 ISCA1Q9BUE6 129 aa19.91■□□□□ 0.78
TRIM50-203ENST00000488217 MBIPQ9NS73 344 aa19.91■□□□□ 0.78
TRIM50-203ENST00000488217 LAMB4A4D0S4 1761 aa19.9■□□□□ 0.78
TRIM50-203ENST00000488217 ATP5J2-PTCD1G3V325 749 aa19.9■□□□□ 0.78
TRIM50-203ENST00000488217 ZNF853P0CG23 659 aa19.9■□□□□ 0.78
TRIM50-203ENST00000488217 VEGFBP49765 207 aa19.9■□□□□ 0.78
TRIM50-203ENST00000488217 CXCL9Q07325 125 aa19.9■□□□□ 0.78
TRIM50-203ENST00000488217 TNS4Q8IZW8 715 aa19.9■□□□□ 0.78
TRIM50-203ENST00000488217 FAM89AQ96GI7 184 aa19.9■□□□□ 0.78
TRIM50-203ENST00000488217 ARFGEF2Q9Y6D5 1785 aa19.9■□□□□ 0.78
TRIM50-203ENST00000488217 NUP98P52948 1817 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms