RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 PPP1R42Q7Z4L9 355 aa15.99■□□□□ 0.15
VPS16-208ENST00000487461 RPGRQ92834 1020 aaKnown RBP15.99■□□□□ 0.15
VPS16-208ENST00000487461 ADAMTS8Q9UP79 889 aa15.99■□□□□ 0.15
VPS16-208ENST00000487461 IBTKQ9P2D0 1353 aaPredicted RBP15.99■□□□□ 0.15
VPS16-208ENST00000487461 ZNF541Q9H0D2 1346 aa15.98■□□□□ 0.15
VPS16-208ENST00000487461 IARSP41252 1262 aaKnown RBP15.98■□□□□ 0.15
VPS16-208ENST00000487461 PARP10Q53GL7 1025 aa15.98■□□□□ 0.15
VPS16-208ENST00000487461 CHADLQ6NUI6 762 aa15.98■□□□□ 0.15
VPS16-208ENST00000487461 COPS6Q7L5N1 327 aa15.98■□□□□ 0.15
VPS16-208ENST00000487461 SLC51AQ86UW1 340 aa15.98■□□□□ 0.15
VPS16-208ENST00000487461 RBM17Q96I25 401 aaKnown RBP15.98■□□□□ 0.15
VPS16-208ENST00000487461 L3MBTL3Q96JM7 780 aaPredicted RBP15.98■□□□□ 0.15
VPS16-208ENST00000487461 CRAMP1Q96RY5 1269 aa15.98■□□□□ 0.15
VPS16-208ENST00000487461 LAS1LQ9Y4W2 734 aaKnown RBP15.98■□□□□ 0.15
VPS16-208ENST00000487461 FZD9O00144 591 aa15.97■□□□□ 0.15
VPS16-208ENST00000487461 AIMP1Q12904 312 aaKnown RBP15.97■□□□□ 0.15
VPS16-208ENST00000487461 WDR43Q15061 677 aaKnown RBP eCLIP15.97■□□□□ 0.15
VPS16-208ENST00000487461 SLC10A5Q5PT55 438 aa15.97■□□□□ 0.15
VPS16-208ENST00000487461 CC2D2BQ6DHV5 1058 aa15.97■□□□□ 0.15
VPS16-208ENST00000487461 XAGE3Q8WTP9 111 aa15.97■□□□□ 0.15
VPS16-208ENST00000487461 PSMD1Q99460 953 aa15.97■□□□□ 0.15
VPS16-208ENST00000487461 UTP14AQ9BVJ6 771 aaKnown RBP15.97■□□□□ 0.15
VPS16-208ENST00000487461 TAF1DQ9H5J8 278 aaPredicted RBP15.97■□□□□ 0.15
VPS16-208ENST00000487461 SNED1Q8TER0 1413 aa15.96■□□□□ 0.15
VPS16-208ENST00000487461 IQCA1LA6NCM1 817 aa15.96■□□□□ 0.15
VPS16-208ENST00000487461 TCERG1O14776 1098 aaKnown RBP15.96■□□□□ 0.15
VPS16-208ENST00000487461 NLRP3Q96P20 1036 aa15.96■□□□□ 0.15
VPS16-208ENST00000487461 RIC1Q4ADV7 1423 aa15.95■□□□□ 0.14
VPS16-208ENST00000487461 PRKRIP1Q9H875 184 aaPredicted RBP15.95■□□□□ 0.14
VPS16-208ENST00000487461 DDX21Q9NR30 783 aaKnown RBP eCLIP15.95■□□□□ 0.14
VPS16-208ENST00000487461 PPEF1O14829 653 aaPredicted RBP15.94■□□□□ 0.14
VPS16-208ENST00000487461 NLRP10Q86W26 655 aa15.94■□□□□ 0.14
VPS16-208ENST00000487461 LDHDQ86WU2 507 aa15.94■□□□□ 0.14
VPS16-208ENST00000487461 HACL1Q9UJ83 578 aa15.94■□□□□ 0.14
VPS16-208ENST00000487461 TCIRG1Q13488 830 aa15.93■□□□□ 0.14
VPS16-208ENST00000487461 GRIPAP1Q4V328 841 aa15.93■□□□□ 0.14
VPS16-208ENST00000487461 HSP90AB3PQ58FF7 597 aa15.93■□□□□ 0.14
VPS16-208ENST00000487461 JDP2Q8WYK2 163 aa15.93■□□□□ 0.14
VPS16-208ENST00000487461 CHPF2Q9P2E5 772 aa15.93■□□□□ 0.14
VPS16-208ENST00000487461 HCLS1P14317 486 aaPredicted RBP15.92■□□□□ 0.14
VPS16-208ENST00000487461 EPHX2P34913 555 aa15.92■□□□□ 0.14
VPS16-208ENST00000487461 EAPPQ56P03 285 aaPredicted RBP15.92■□□□□ 0.14
VPS16-208ENST00000487461 GPC2Q8N158 579 aa15.92■□□□□ 0.14
VPS16-208ENST00000487461 CREBZFQ9NS37 354 aa15.92■□□□□ 0.14
VPS16-208ENST00000487461 ITGBL1O95965 494 aaPredicted RBP15.91■□□□□ 0.14
VPS16-208ENST00000487461 EIF6P56537 245 aaKnown RBP15.91■□□□□ 0.14
VPS16-208ENST00000487461 HDGFL1Q5TGJ6 251 aa15.91■□□□□ 0.14
VPS16-208ENST00000487461 LARGE2Q8N3Y3 721 aa15.91■□□□□ 0.14
VPS16-208ENST00000487461 ZNF428Q96B54 188 aa15.91■□□□□ 0.14
VPS16-208ENST00000487461 CFAP44Q96MT7 982 aa15.91■□□□□ 0.14
VPS16-208ENST00000487461 TRMT112Q9UI30 125 aaKnown RBP15.91■□□□□ 0.14
VPS16-208ENST00000487461 CLEC11AQ9Y240 323 aa15.91■□□□□ 0.14
VPS16-208ENST00000487461 ATP6V0A2Q9Y487 856 aa15.91■□□□□ 0.14
VPS16-208ENST00000487461 RNF123Q5XPI4 1314 aa15.91■□□□□ 0.14
VPS16-208ENST00000487461 PASKQ96RG2 1323 aa15.91■□□□□ 0.14
VPS16-208ENST00000487461 COL4A5P29400 1685 aa15.9■□□□□ 0.14
VPS16-208ENST00000487461 HOXB7P09629 217 aa15.9■□□□□ 0.14
VPS16-208ENST00000487461 GJA3Q9Y6H8 435 aa15.9■□□□□ 0.14
VPS16-208ENST00000487461 ABCC4O15439 1325 aa15.9■□□□□ 0.14
VPS16-208ENST00000487461 SCN4AP35499 1836 aa15.89■□□□□ 0.13
VPS16-208ENST00000487461 APAF1O14727 1248 aa15.89■□□□□ 0.13
VPS16-208ENST00000487461 BBOX1O75936 387 aa15.89■□□□□ 0.13
VPS16-208ENST00000487461 ZNF853P0CG23 659 aa15.89■□□□□ 0.13
VPS16-208ENST00000487461 COL13A1Q5TAT6 717 aaPredicted RBP15.89■□□□□ 0.13
VPS16-208ENST00000487461 DUSP27Q5VZP5 1158 aa15.89■□□□□ 0.13
VPS16-208ENST00000487461 ANKRD13DQ6ZTN6 518 aa15.89■□□□□ 0.13
VPS16-208ENST00000487461 PLBD2Q8NHP8 589 aa15.89■□□□□ 0.13
VPS16-208ENST00000487461 MBIPQ9NS73 344 aa15.89■□□□□ 0.13
VPS16-208ENST00000487461 MKRN1Q9UHC7 482 aaKnown RBP15.89■□□□□ 0.13
VPS16-208ENST00000487461 AOC3Q16853 763 aa15.88■□□□□ 0.13
VPS16-208ENST00000487461 PNMA8AQ86V59 439 aaPredicted RBP15.88■□□□□ 0.13
VPS16-208ENST00000487461 SP8Q8IXZ3 490 aa15.88■□□□□ 0.13
VPS16-208ENST00000487461 ISCA1Q9BUE6 129 aa15.88■□□□□ 0.13
VPS16-208ENST00000487461 TMX4Q9H1E5 349 aaPredicted RBP15.88■□□□□ 0.13
VPS16-208ENST00000487461 DBF4Q9UBU7 674 aaPredicted RBP15.88■□□□□ 0.13
VPS16-208ENST00000487461 SH3TC1Q8TE82 1336 aa15.88■□□□□ 0.13
VPS16-208ENST00000487461 ATP5J2-PTCD1G3V325 749 aa15.87■□□□□ 0.13
VPS16-208ENST00000487461 PPIP5K2O43314 1243 aa15.87■□□□□ 0.13
VPS16-208ENST00000487461 HSPA1AP0DMV8 641 aaKnown RBP15.87■□□□□ 0.13
VPS16-208ENST00000487461 HSPA1BP0DMV9 641 aaKnown RBP15.87■□□□□ 0.13
VPS16-208ENST00000487461 MAP1SQ66K74 1059 aaPredicted RBP15.87■□□□□ 0.13
VPS16-208ENST00000487461 DDX46Q7L014 1031 aaKnown RBP15.87■□□□□ 0.13
VPS16-208ENST00000487461 NIM1KQ8IY84 436 aa15.87■□□□□ 0.13
VPS16-208ENST00000487461 CNTROBQ8N137 903 aa15.87■□□□□ 0.13
VPS16-208ENST00000487461 RTFDC1Q9BY42 306 aaPredicted RBP15.87■□□□□ 0.13
VPS16-208ENST00000487461 VPS33BQ9H267 617 aa15.87■□□□□ 0.13
VPS16-208ENST00000487461 HYPKQ9NX55 129 aa15.87■□□□□ 0.13
VPS16-208ENST00000487461 EPS15P42566 896 aa15.86■□□□□ 0.13
VPS16-208ENST00000487461 MPNDQ8N594 471 aa15.86■□□□□ 0.13
VPS16-208ENST00000487461 TMEM88BA6NKF7 163 aa15.85■□□□□ 0.13
VPS16-208ENST00000487461 ELL2O00472 640 aaPredicted RBP15.85■□□□□ 0.13
VPS16-208ENST00000487461 SCNN1DP51172 638 aa15.85■□□□□ 0.13
VPS16-208ENST00000487461 GRAPQ13588 217 aa15.85■□□□□ 0.13
VPS16-208ENST00000487461 DPP8Q6V1X1 898 aaPredicted RBP15.85■□□□□ 0.13
VPS16-208ENST00000487461 SUPT20HQ8NEM7 779 aa15.85■□□□□ 0.13
VPS16-208ENST00000487461 GRAPLQ8TC17 118 aaPredicted RBP15.85■□□□□ 0.13
VPS16-208ENST00000487461 FAM89AQ96GI7 184 aa15.85■□□□□ 0.13
VPS16-208ENST00000487461 IFT57Q9NWB7 429 aa15.85■□□□□ 0.13
VPS16-208ENST00000487461 PCNTO95613 3336 aa15.85■□□□□ 0.13
VPS16-208ENST00000487461 LMOD1P29536 600 aaPredicted RBP15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms