RNA–Protein interactions for RNA: ENST00000487054.1

LBR-207, Transcript of lamin B receptor, humanhuman

TSL 3

Gene LBR, Length 731 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LBR-207ENST00000487054 TPTE2Q6XPS3 522 aa13.23□□□□□ -0.29
LBR-207ENST00000487054 LRP10Q7Z4F1 713 aa13.23□□□□□ -0.29
LBR-207ENST00000487054 C16orf71Q8IYS4 520 aaPredicted RBP13.23□□□□□ -0.29
LBR-207ENST00000487054 NECTIN2Q92692 538 aa13.23□□□□□ -0.29
LBR-207ENST00000487054 ZC3H4Q9UPT8 1303 aaKnown RBP13.22□□□□□ -0.29
LBR-207ENST00000487054 NPR1P16066 1061 aa13.22□□□□□ -0.29
LBR-207ENST00000487054 EIF2S2P20042 333 aaKnown RBP13.22□□□□□ -0.29
LBR-207ENST00000487054 TAOK3Q9H2K8 898 aa13.22□□□□□ -0.29
LBR-207ENST00000487054 TRIM35Q9UPQ4 493 aa13.22□□□□□ -0.29
LBR-207ENST00000487054 ANKRD36CQ5JPF3 1778 aa13.22□□□□□ -0.29
LBR-207ENST00000487054 LTBP3Q9NS15 1303 aa13.21□□□□□ -0.29
LBR-207ENST00000487054 ERVV-1B6SEH8 477 aa13.21□□□□□ -0.29
LBR-207ENST00000487054 RGL2O15211 777 aa13.21□□□□□ -0.29
LBR-207ENST00000487054 APLP1P51693 650 aa13.21□□□□□ -0.29
LBR-207ENST00000487054 CCDC184Q52MB2 194 aa13.21□□□□□ -0.29
LBR-207ENST00000487054 SUSD4Q5VX71 490 aa13.21□□□□□ -0.29
LBR-207ENST00000487054 KIF6Q6ZMV9 814 aa13.21□□□□□ -0.29
LBR-207ENST00000487054 C3orf67Q6ZVT6 689 aa13.21□□□□□ -0.29
LBR-207ENST00000487054 DNAJC5GQ8N7S2 189 aa13.21□□□□□ -0.29
LBR-207ENST00000487054 LAMB2P55268 1798 aa13.2□□□□□ -0.3
LBR-207ENST00000487054 GTF2E1P29083 439 aaPredicted RBP13.2□□□□□ -0.3
LBR-207ENST00000487054 ZNF428Q96B54 188 aa13.2□□□□□ -0.3
LBR-207ENST00000487054 SNED1Q8TER0 1413 aa13.2□□□□□ -0.3
LBR-207ENST00000487054 COL4A5P29400 1685 aa13.19□□□□□ -0.3
LBR-207ENST00000487054 DDNO94850 711 aaPredicted RBP13.19□□□□□ -0.3
LBR-207ENST00000487054 NTSR2O95665 410 aa13.19□□□□□ -0.3
LBR-207ENST00000487054 CCDC93Q567U6 631 aa13.19□□□□□ -0.3
LBR-207ENST00000487054 ZNF34Q8IZ26 560 aa13.19□□□□□ -0.3
LBR-207ENST00000487054 ZNF277Q9NRM2 450 aaPredicted RBP13.19□□□□□ -0.3
LBR-207ENST00000487054 BABAM1Q9NWV8 329 aa13.19□□□□□ -0.3
LBR-207ENST00000487054 LAS1LQ9Y4W2 734 aaKnown RBP13.19□□□□□ -0.3
LBR-207ENST00000487054 PCNTO95613 3336 aa13.18□□□□□ -0.3
LBR-207ENST00000487054 ERBB4Q15303 1308 aa13.18□□□□□ -0.3
LBR-207ENST00000487054 POTEIP0CG38 1075 aa13.18□□□□□ -0.3
LBR-207ENST00000487054 POTEJP0CG39 1038 aa13.18□□□□□ -0.3
LBR-207ENST00000487054 VEGFAP15692 232 aaPredicted RBP13.18□□□□□ -0.3
LBR-207ENST00000487054 CALD1Q05682 793 aaKnown RBP13.18□□□□□ -0.3
LBR-207ENST00000487054 FSTL1Q12841 308 aa13.18□□□□□ -0.3
LBR-207ENST00000487054 CRY2Q49AN0 593 aa13.18□□□□□ -0.3
LBR-207ENST00000487054 GIGYF2Q6Y7W6 1299 aaKnown RBP13.18□□□□□ -0.3
LBR-207ENST00000487054 SSUH2Q9Y2M2 353 aa13.18□□□□□ -0.3
LBR-207ENST00000487054 TAF1P21675 1872 aa13.18□□□□□ -0.3
LBR-207ENST00000487054 ZNF541Q9H0D2 1346 aa13.17□□□□□ -0.3
LBR-207ENST00000487054 CHL1O00533 1208 aa13.17□□□□□ -0.3
LBR-207ENST00000487054 AIMP1Q12904 312 aaKnown RBP13.17□□□□□ -0.3
LBR-207ENST00000487054 CCDC27Q2M243 656 aa13.17□□□□□ -0.3
LBR-207ENST00000487054 SMC1BQ8NDV3 1235 aa13.17□□□□□ -0.3
LBR-207ENST00000487054 NYXQ9GZU5 481 aa13.17□□□□□ -0.3
LBR-207ENST00000487054 IBTKQ9P2D0 1353 aaPredicted RBP13.17□□□□□ -0.3
LBR-207ENST00000487054 RIC1Q4ADV7 1423 aa13.16□□□□□ -0.3
LBR-207ENST00000487054 TCERG1O14776 1098 aaKnown RBP13.16□□□□□ -0.3
LBR-207ENST00000487054 FKBP4Q02790 459 aaKnown RBP eCLIP13.16□□□□□ -0.3
LBR-207ENST00000487054 SOGA3Q5TF21 947 aa13.16□□□□□ -0.3
LBR-207ENST00000487054 COPS6Q7L5N1 327 aa13.16□□□□□ -0.3
LBR-207ENST00000487054 SYNE4Q8N205 404 aa13.16□□□□□ -0.3
LBR-207ENST00000487054 XAGE3Q8WTP9 111 aa13.16□□□□□ -0.3
LBR-207ENST00000487054 APAF1O14727 1248 aa13.15□□□□□ -0.3
LBR-207ENST00000487054 DPY19L2Q6NUT2 758 aa13.15□□□□□ -0.3
LBR-207ENST00000487054 PIP4P2Q8N4L2 257 aa13.15□□□□□ -0.3
LBR-207ENST00000487054 CHPF2Q9P2E5 772 aa13.15□□□□□ -0.3
LBR-207ENST00000487054 CACNA1FO60840 1977 aa13.14□□□□□ -0.31
LBR-207ENST00000487054 DDX60Q8IY21 1712 aaKnown RBP13.14□□□□□ -0.31
LBR-207ENST00000487054 SCN4AP35499 1836 aa13.14□□□□□ -0.31
LBR-207ENST00000487054 ALDH1B1P30837 517 aa13.14□□□□□ -0.31
LBR-207ENST00000487054 FAM9BQ8IZU0 186 aa13.14□□□□□ -0.31
LBR-207ENST00000487054 RPGRQ92834 1020 aaKnown RBP13.14□□□□□ -0.31
LBR-207ENST00000487054 COL4A1P02462 1669 aa13.14□□□□□ -0.31
LBR-207ENST00000487054 HOXA10P31260 410 aaPredicted RBP13.13□□□□□ -0.31
LBR-207ENST00000487054 IARSP41252 1262 aaKnown RBP13.13□□□□□ -0.31
LBR-207ENST00000487054 DDX21Q9NR30 783 aaKnown RBP eCLIP13.13□□□□□ -0.31
LBR-207ENST00000487054 MBIPQ9NS73 344 aa13.13□□□□□ -0.31
LBR-207ENST00000487054 LTBP1Q14766 1721 aa13.13□□□□□ -0.31
LBR-207ENST00000487054 PPEF1O14829 653 aaPredicted RBP13.12□□□□□ -0.31
LBR-207ENST00000487054 HCLS1P14317 486 aaPredicted RBP13.12□□□□□ -0.31
LBR-207ENST00000487054 PARP10Q53GL7 1025 aa13.12□□□□□ -0.31
LBR-207ENST00000487054 HDGFL1Q5TGJ6 251 aa13.12□□□□□ -0.31
LBR-207ENST00000487054 PPP1R42Q7Z4L9 355 aa13.12□□□□□ -0.31
LBR-207ENST00000487054 NLRP10Q86W26 655 aa13.12□□□□□ -0.31
LBR-207ENST00000487054 RTKN2Q8IZC4 609 aa13.12□□□□□ -0.31
LBR-207ENST00000487054 MIER1Q8N108 512 aa13.12□□□□□ -0.31
LBR-207ENST00000487054 KLRG1Q96E93 195 aa13.12□□□□□ -0.31
LBR-207ENST00000487054 UTP14AQ9BVJ6 771 aaKnown RBP13.12□□□□□ -0.31
LBR-207ENST00000487054 ADAMTSL1Q8N6G6 1762 aa13.12□□□□□ -0.31
LBR-207ENST00000487054 SPDYE1Q8NFV5 336 aaPredicted RBP13.11□□□□□ -0.31
LBR-207ENST00000487054 RBM17Q96I25 401 aaKnown RBP13.11□□□□□ -0.31
LBR-207ENST00000487054 CFAP44Q96MT7 982 aa13.11□□□□□ -0.31
LBR-207ENST00000487054 ABCC4O15439 1325 aa13.11□□□□□ -0.31
LBR-207ENST00000487054 IL16Q14005 1332 aa13.11□□□□□ -0.31
LBR-207ENST00000487054 RNF123Q5XPI4 1314 aa13.11□□□□□ -0.31
LBR-207ENST00000487054 FZD9O00144 591 aa13.1□□□□□ -0.31
LBR-207ENST00000487054 ZNF853P0CG23 659 aa13.1□□□□□ -0.31
LBR-207ENST00000487054 GNAI1P63096 354 aa13.1□□□□□ -0.31
LBR-207ENST00000487054 TCIRG1Q13488 830 aa13.1□□□□□ -0.31
LBR-207ENST00000487054 SLC10A5Q5PT55 438 aa13.1□□□□□ -0.31
LBR-207ENST00000487054 DUSP27Q5VZP5 1158 aa13.1□□□□□ -0.31
LBR-207ENST00000487054 CHADLQ6NUI6 762 aa13.1□□□□□ -0.31
LBR-207ENST00000487054 L3MBTL3Q96JM7 780 aaPredicted RBP13.1□□□□□ -0.31
LBR-207ENST00000487054 NLRP3Q96P20 1036 aa13.1□□□□□ -0.31
LBR-207ENST00000487054 CRAMP1Q96RY5 1269 aa13.1□□□□□ -0.31
LBR-207ENST00000487054 PSMD1Q99460 953 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms