RNA–Protein interactions for RNA: ENST00000487043.5

PTCD3-216, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 1,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-216ENST00000487043 EDARADDQ8WWZ3 215 aa6.47□□□□□ -1.37
PTCD3-216ENST00000487043 XAGE2Q96GT9 111 aa6.47□□□□□ -1.37
PTCD3-216ENST00000487043 FHDC1Q9C0D6 1143 aaPredicted RBP6.47□□□□□ -1.37
PTCD3-216ENST00000487043 SCHIP1Q9P0W5 487 aaPredicted RBP6.47□□□□□ -1.37
PTCD3-216ENST00000487043 K7ELQ4 463 aaPredicted RBP6.46□□□□□ -1.38
PTCD3-216ENST00000487043 IGSF3O75054 1194 aa6.46□□□□□ -1.38
PTCD3-216ENST00000487043 NPR3P17342 541 aa6.46□□□□□ -1.38
PTCD3-216ENST00000487043 MSX1P28360 303 aa6.46□□□□□ -1.38
PTCD3-216ENST00000487043 LBRQ14739 615 aaKnown RBP6.46□□□□□ -1.38
PTCD3-216ENST00000487043 C4orf17Q53FE4 359 aa6.46□□□□□ -1.38
PTCD3-216ENST00000487043 FBXO33Q7Z6M2 555 aa6.46□□□□□ -1.38
PTCD3-216ENST00000487043 RGL4Q8IZJ4 473 aa6.46□□□□□ -1.38
PTCD3-216ENST00000487043 C2orf49Q9BVC5 232 aaPredicted RBP6.46□□□□□ -1.38
PTCD3-216ENST00000487043 KRBA1A5PL33 1030 aa6.45□□□□□ -1.38
PTCD3-216ENST00000487043 NDUFB5O43674 189 aa6.45□□□□□ -1.38
PTCD3-216ENST00000487043 GRIN2CQ14957 1233 aa6.45□□□□□ -1.38
PTCD3-216ENST00000487043 MTFR1Q15390 333 aa6.45□□□□□ -1.38
PTCD3-216ENST00000487043 TLR1Q15399 786 aa6.45□□□□□ -1.38
PTCD3-216ENST00000487043 EAPPQ56P03 285 aaPredicted RBP6.45□□□□□ -1.38
PTCD3-216ENST00000487043 COX20Q5RI15 118 aa6.45□□□□□ -1.38
PTCD3-216ENST00000487043 XP32Q5T750 250 aa6.45□□□□□ -1.38
PTCD3-216ENST00000487043 C1orf229Q6ZS94 237 aaPredicted RBP6.45□□□□□ -1.38
PTCD3-216ENST00000487043 TMC1Q8TDI8 760 aa6.45□□□□□ -1.38
PTCD3-216ENST00000487043 ABHD17AQ96GS6 310 aa6.45□□□□□ -1.38
PTCD3-216ENST00000487043 NGLY1Q96IV0 654 aa6.45□□□□□ -1.38
PTCD3-216ENST00000487043 BRPF3Q9ULD4 1205 aa6.45□□□□□ -1.38
PTCD3-216ENST00000487043 ATXN7L1Q9ULK2 861 aaPredicted RBP6.45□□□□□ -1.38
PTCD3-216ENST00000487043 CHMP3Q9Y3E7 222 aa6.45□□□□□ -1.38
PTCD3-216ENST00000487043 USP3Q9Y6I4 520 aa6.45□□□□□ -1.38
PTCD3-216ENST00000487043 FGFR3P22607 806 aa6.44□□□□□ -1.38
PTCD3-216ENST00000487043 BAG6P46379 1132 aa6.44□□□□□ -1.38
PTCD3-216ENST00000487043 EIF1AXP47813 144 aaKnown RBP6.44□□□□□ -1.38
PTCD3-216ENST00000487043 PSMA6P60900 246 aaKnown RBP6.44□□□□□ -1.38
PTCD3-216ENST00000487043 TMC7Q7Z402 723 aa6.44□□□□□ -1.38
PTCD3-216ENST00000487043 ALYREFQ86V81 257 aaKnown RBP6.44□□□□□ -1.38
PTCD3-216ENST00000487043 STAG2Q8N3U4 1231 aa6.44□□□□□ -1.38
PTCD3-216ENST00000487043 IGSF5Q9NSI5 407 aa6.44□□□□□ -1.38
PTCD3-216ENST00000487043 STIM2Q9P246 746 aa6.44□□□□□ -1.38
PTCD3-216ENST00000487043 PIK3R2O00459 728 aa6.43□□□□□ -1.38
PTCD3-216ENST00000487043 CDK2AP1O14519 115 aa6.43□□□□□ -1.38
PTCD3-216ENST00000487043 TNFRSF10BO14763 440 aa6.43□□□□□ -1.38
PTCD3-216ENST00000487043 COL8A1P27658 744 aa6.43□□□□□ -1.38
PTCD3-216ENST00000487043 RHBDD1Q8TEB9 315 aa6.43□□□□□ -1.38
PTCD3-216ENST00000487043 RBCK1Q9BYM8 510 aa6.43□□□□□ -1.38
PTCD3-216ENST00000487043 QTRT2Q9H974 415 aaKnown RBP6.43□□□□□ -1.38
PTCD3-216ENST00000487043 CCDC87Q9NVE4 849 aa6.43□□□□□ -1.38
PTCD3-216ENST00000487043 GGA1Q9UJY5 639 aa6.43□□□□□ -1.38
PTCD3-216ENST00000487043 C2CD2LO14523 706 aa6.42□□□□□ -1.38
PTCD3-216ENST00000487043 BNIP3LO60238 219 aa6.42□□□□□ -1.38
PTCD3-216ENST00000487043 FURINP09958 794 aa6.42□□□□□ -1.38
PTCD3-216ENST00000487043 PLA2G4AP47712 749 aa6.42□□□□□ -1.38
PTCD3-216ENST00000487043 CTBSQ01459 385 aa6.42□□□□□ -1.38
PTCD3-216ENST00000487043 UBAP2LQ14157 1087 aaKnown RBP6.42□□□□□ -1.38
PTCD3-216ENST00000487043 COL19A1Q14993 1142 aa6.42□□□□□ -1.38
PTCD3-216ENST00000487043 SH3PXD2AQ5TCZ1 1133 aa6.42□□□□□ -1.38
PTCD3-216ENST00000487043 ALKBH2Q6NS38 261 aa6.42□□□□□ -1.38
PTCD3-216ENST00000487043 SLCO4C1Q6ZQN7 724 aa6.42□□□□□ -1.38
PTCD3-216ENST00000487043 ZNF295-AS1Q8N0V1 137 aa6.42□□□□□ -1.38
PTCD3-216ENST00000487043 CABP1Q9NZU7 370 aa6.42□□□□□ -1.38
PTCD3-216ENST00000487043 LRFN2Q9ULH4 789 aa6.42□□□□□ -1.38
PTCD3-216ENST00000487043 ZNF232Q9UNY5 417 aa6.42□□□□□ -1.38
PTCD3-216ENST00000487043 SERTM1A2A2V5 107 aa6.41□□□□□ -1.38
PTCD3-216ENST00000487043 FZD6O60353 706 aa6.41□□□□□ -1.38
PTCD3-216ENST00000487043 P4HBP07237 508 aaKnown RBP6.41□□□□□ -1.38
PTCD3-216ENST00000487043 FIGNL1Q6PIW4 674 aa6.41□□□□□ -1.38
PTCD3-216ENST00000487043 PPARGC1BQ86YN6 1023 aaKnown RBP6.41□□□□□ -1.38
PTCD3-216ENST00000487043 BCL11AQ9H165 835 aa6.41□□□□□ -1.38
PTCD3-216ENST00000487043 SUV39H2Q9H5I1 410 aa6.41□□□□□ -1.38
PTCD3-216ENST00000487043 IQSEC3Q9UPP2 1182 aaPredicted RBP6.41□□□□□ -1.38
PTCD3-216ENST00000487043 HCN4Q9Y3Q4 1203 aa6.41□□□□□ -1.38
PTCD3-216ENST00000487043 PARP3Q9Y6F1 533 aa6.41□□□□□ -1.38
PTCD3-216ENST00000487043 NEURL1BA8MQ27 555 aa6.4□□□□□ -1.38
PTCD3-216ENST00000487043 GNB5O14775 395 aa6.4□□□□□ -1.38
PTCD3-216ENST00000487043 ZBTB39O15060 712 aa6.4□□□□□ -1.38
PTCD3-216ENST00000487043 TCF3P15923 654 aa6.4□□□□□ -1.38
PTCD3-216ENST00000487043 BRD2P25440 801 aaKnown RBP6.4□□□□□ -1.38
PTCD3-216ENST00000487043 NOS2P35228 1153 aa6.4□□□□□ -1.38
PTCD3-216ENST00000487043 MAPK8P45983 427 aa6.4□□□□□ -1.38
PTCD3-216ENST00000487043 TEAD4Q15561 434 aa6.4□□□□□ -1.38
PTCD3-216ENST00000487043 ATCAYQ86WG3 371 aa6.4□□□□□ -1.38
PTCD3-216ENST00000487043 ABTB2Q8N961 1025 aa6.4□□□□□ -1.38
PTCD3-216ENST00000487043 ZDHHC1Q8WTX9 485 aa6.4□□□□□ -1.38
PTCD3-216ENST00000487043 AIDAQ96BJ3 306 aa6.4□□□□□ -1.38
PTCD3-216ENST00000487043 CRISPLD1Q9H336 500 aa6.4□□□□□ -1.38
PTCD3-216ENST00000487043 USP35Q9P2H5 1018 aa6.4□□□□□ -1.38
PTCD3-216ENST00000487043 EML1O00423 815 aa6.39□□□□□ -1.39
PTCD3-216ENST00000487043 TREHO43280 583 aa6.39□□□□□ -1.39
PTCD3-216ENST00000487043 EPXP11678 715 aa6.39□□□□□ -1.39
PTCD3-216ENST00000487043 PLCB3Q01970 1234 aa6.39□□□□□ -1.39
PTCD3-216ENST00000487043 TSNAXIP1Q2TAA8 658 aa6.39□□□□□ -1.39
PTCD3-216ENST00000487043 FAM26DQ5JW98 314 aa6.39□□□□□ -1.39
PTCD3-216ENST00000487043 LINC00114Q6XXX2 140 aa6.39□□□□□ -1.39
PTCD3-216ENST00000487043 ALDH16A1Q8IZ83 802 aa6.39□□□□□ -1.39
PTCD3-216ENST00000487043 L3MBTL2Q969R5 705 aa6.39□□□□□ -1.39
PTCD3-216ENST00000487043 MYO19Q96H55 970 aa6.39□□□□□ -1.39
PTCD3-216ENST00000487043 BTBD6Q96KE9 485 aa6.39□□□□□ -1.39
PTCD3-216ENST00000487043 CITED4Q96RK1 184 aa6.39□□□□□ -1.39
PTCD3-216ENST00000487043 ZCCHC2Q9C0B9 1178 aaKnown RBP6.39□□□□□ -1.39
PTCD3-216ENST00000487043 NDFIP2Q9NV92 336 aa6.39□□□□□ -1.39
PTCD3-216ENST00000487043 PCDHGC4Q9Y5F7 938 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms