RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 KCNH4Q9UQ05 1017 aa8.1□□□□□ -1.11
SNRNP40-205ENST00000486941 PIK3R2O00459 728 aa8.09□□□□□ -1.11
SNRNP40-205ENST00000486941 ADH7P40394 386 aa8.09□□□□□ -1.11
SNRNP40-205ENST00000486941 PTK7Q13308 1070 aa8.09□□□□□ -1.11
SNRNP40-205ENST00000486941 STAG2Q8N3U4 1231 aa8.09□□□□□ -1.11
SNRNP40-205ENST00000486941 PRDM6Q9NQX0 595 aa8.09□□□□□ -1.11
SNRNP40-205ENST00000486941 SPATA31C1P0DKV0 1188 aa8.08□□□□□ -1.12
SNRNP40-205ENST00000486941 ALAS2P22557 587 aa8.08□□□□□ -1.12
SNRNP40-205ENST00000486941 BTLAQ7Z6A9 289 aa8.08□□□□□ -1.12
SNRNP40-205ENST00000486941 NGLY1Q96IV0 654 aa8.08□□□□□ -1.12
SNRNP40-205ENST00000486941 SEC13P55735 322 aa8.07□□□□□ -1.12
SNRNP40-205ENST00000486941 ILDR2Q71H61 639 aa8.07□□□□□ -1.12
SNRNP40-205ENST00000486941 CHMP7Q8WUX9 453 aaPredicted RBP8.07□□□□□ -1.12
SNRNP40-205ENST00000486941 ARXQ96QS3 562 aa8.07□□□□□ -1.12
SNRNP40-205ENST00000486941 PPP1R12CQ9BZL4 782 aa8.07□□□□□ -1.12
SNRNP40-205ENST00000486941 DPYDQ12882 1025 aa8.06□□□□□ -1.12
SNRNP40-205ENST00000486941 Q8N3U1 123 aa8.06□□□□□ -1.12
SNRNP40-205ENST00000486941 BHMTQ93088 406 aa8.06□□□□□ -1.12
SNRNP40-205ENST00000486941 ANKIB1Q9P2G1 1089 aa8.06□□□□□ -1.12
SNRNP40-205ENST00000486941 GRIK4Q16099 956 aa8.05□□□□□ -1.12
SNRNP40-205ENST00000486941 RSPO4Q2I0M5 234 aaPredicted RBP8.05□□□□□ -1.12
SNRNP40-205ENST00000486941 GSX2Q9BZM3 304 aa8.05□□□□□ -1.12
SNRNP40-205ENST00000486941 SEMA6BQ9H3T3 888 aa8.05□□□□□ -1.12
SNRNP40-205ENST00000486941 CC2D2AQ9P2K1 1620 aa8.04□□□□□ -1.12
SNRNP40-205ENST00000486941 GATA4P43694 442 aa8.04□□□□□ -1.12
SNRNP40-205ENST00000486941 FOXD4L6Q3SYB3 417 aaPredicted RBP8.04□□□□□ -1.12
SNRNP40-205ENST00000486941 NKAPLQ5M9Q1 402 aa8.04□□□□□ -1.12
SNRNP40-205ENST00000486941 FOXD4L3Q6VB84 417 aaPredicted RBP8.04□□□□□ -1.12
SNRNP40-205ENST00000486941 TPSG1Q9NRR2 321 aa8.04□□□□□ -1.12
SNRNP40-205ENST00000486941 NAGPAQ9UK23 515 aa8.04□□□□□ -1.12
SNRNP40-205ENST00000486941 KLK14Q9P0G3 267 aa8.03□□□□□ -1.12
SNRNP40-205ENST00000486941 CHMP3Q9Y3E7 222 aa8.03□□□□□ -1.12
SNRNP40-205ENST00000486941 SCRIBQ14160 1630 aa8.03□□□□□ -1.12
SNRNP40-205ENST00000486941 CECR2Q9BXF3 1484 aa8.02□□□□□ -1.13
SNRNP40-205ENST00000486941 A6NJR5 290 aa8.02□□□□□ -1.13
SNRNP40-205ENST00000486941 USP17L15C9J2P7 530 aa8.02□□□□□ -1.13
SNRNP40-205ENST00000486941 USP17L10C9JJH3 530 aa8.02□□□□□ -1.13
SNRNP40-205ENST00000486941 USP17L13C9JLJ4 530 aa8.02□□□□□ -1.13
SNRNP40-205ENST00000486941 USP17L12C9JPN9 530 aa8.02□□□□□ -1.13
SNRNP40-205ENST00000486941 USP17L11C9JVI0 530 aa8.02□□□□□ -1.13
SNRNP40-205ENST00000486941 USP17L21D6R901 530 aa8.02□□□□□ -1.13
SNRNP40-205ENST00000486941 USP17L18D6R9N7 530 aa8.02□□□□□ -1.13
SNRNP40-205ENST00000486941 USP17L22D6RA61 530 aa8.02□□□□□ -1.13
SNRNP40-205ENST00000486941 USP17L17D6RBQ6 530 aa8.02□□□□□ -1.13
SNRNP40-205ENST00000486941 USP17L19D6RCP7 530 aa8.02□□□□□ -1.13
SNRNP40-205ENST00000486941 USP17L20D6RJB6 530 aa8.02□□□□□ -1.13
SNRNP40-205ENST00000486941 USP17L24Q0WX57 530 aa8.02□□□□□ -1.13
SNRNP40-205ENST00000486941 RTN1Q16799 776 aa8.02□□□□□ -1.13
SNRNP40-205ENST00000486941 TMEM132AQ24JP5 1023 aa8.02□□□□□ -1.13
SNRNP40-205ENST00000486941 ANKMY2Q8IV38 441 aa8.02□□□□□ -1.13
SNRNP40-205ENST00000486941 HINFPQ9BQA5 517 aa8.02□□□□□ -1.13
SNRNP40-205ENST00000486941 SLC6A14Q9UN76 642 aa8.02□□□□□ -1.13
SNRNP40-205ENST00000486941 ZBTB42B2RXF5 422 aa8.01□□□□□ -1.13
SNRNP40-205ENST00000486941 SELPP16109 830 aa8.01□□□□□ -1.13
SNRNP40-205ENST00000486941 LMOD1P29536 600 aaPredicted RBP8.01□□□□□ -1.13
SNRNP40-205ENST00000486941 INPP5BP32019 993 aa8.01□□□□□ -1.13
SNRNP40-205ENST00000486941 PLAURQ03405 335 aa8.01□□□□□ -1.13
SNRNP40-205ENST00000486941 CFAP70Q5T0N1 1121 aa8.01□□□□□ -1.13
SNRNP40-205ENST00000486941 IER5Q5VY09 327 aa8.01□□□□□ -1.13
SNRNP40-205ENST00000486941 LARP1Q6PKG0 1096 aaKnown RBP8.01□□□□□ -1.13
SNRNP40-205ENST00000486941 CALR3Q96L12 384 aaKnown RBP8.01□□□□□ -1.13
SNRNP40-205ENST00000486941 IGFLR1Q9H665 355 aa8.01□□□□□ -1.13
SNRNP40-205ENST00000486941 QTRT2Q9H974 415 aaKnown RBP8.01□□□□□ -1.13
SNRNP40-205ENST00000486941 DNAJB12Q9NXW2 375 aaKnown RBP8.01□□□□□ -1.13
SNRNP40-205ENST00000486941 ZFATQ9P243 1243 aa8.01□□□□□ -1.13
SNRNP40-205ENST00000486941 EIF4G1Q04637 1599 aaKnown RBP8.01□□□□□ -1.13
SNRNP40-205ENST00000486941 TGFBR3LH3BV60 316 aa8□□□□□ -1.13
SNRNP40-205ENST00000486941 IGFBP4P22692 258 aa8□□□□□ -1.13
SNRNP40-205ENST00000486941 WEE1P30291 646 aa8□□□□□ -1.13
SNRNP40-205ENST00000486941 NUDT8Q8WV74 236 aa8□□□□□ -1.13
SNRNP40-205ENST00000486941 FAM196BA6NMK8 535 aa7.99□□□□□ -1.13
SNRNP40-205ENST00000486941 AFF1P51825 1210 aaKnown RBP7.99□□□□□ -1.13
SNRNP40-205ENST00000486941 TBC1D8BQ0IIM8 1120 aa7.99□□□□□ -1.13
SNRNP40-205ENST00000486941 PRRT3Q5FWE3 981 aa7.99□□□□□ -1.13
SNRNP40-205ENST00000486941 UBE2OQ9C0C9 1292 aaKnown RBP7.99□□□□□ -1.13
SNRNP40-205ENST00000486941 A0A0A0MRY4 1105 aa7.98□□□□□ -1.13
SNRNP40-205ENST00000486941 NFKB1P19838 968 aa7.98□□□□□ -1.13
SNRNP40-205ENST00000486941 TRIM28Q13263 835 aaKnown RBP7.98□□□□□ -1.13
SNRNP40-205ENST00000486941 NEUROD1Q13562 356 aa7.98□□□□□ -1.13
SNRNP40-205ENST00000486941 CCINQ13939 588 aa7.98□□□□□ -1.13
SNRNP40-205ENST00000486941 GRIK5Q16478 980 aa7.98□□□□□ -1.13
SNRNP40-205ENST00000486941 SHISA2Q6UWI4 295 aa7.98□□□□□ -1.13
SNRNP40-205ENST00000486941 VRTNQ9H8Y1 702 aa7.98□□□□□ -1.13
SNRNP40-205ENST00000486941 LRFN2Q9ULH4 789 aa7.98□□□□□ -1.13
SNRNP40-205ENST00000486941 RBM19Q9Y4C8 960 aaKnown RBP7.98□□□□□ -1.13
SNRNP40-205ENST00000486941 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.98□□□□□ -1.13
SNRNP40-205ENST00000486941 OPLAHO14841 1288 aa7.97□□□□□ -1.13
SNRNP40-205ENST00000486941 LILRB5O75023 590 aa7.97□□□□□ -1.13
SNRNP40-205ENST00000486941 CDCA8Q53HL2 280 aa7.97□□□□□ -1.13
SNRNP40-205ENST00000486941 TRAPPC3LQ5T215 181 aa7.97□□□□□ -1.13
SNRNP40-205ENST00000486941 IFT43Q96FT9 208 aa7.97□□□□□ -1.13
SNRNP40-205ENST00000486941 USP20Q9Y2K6 914 aa7.97□□□□□ -1.13
SNRNP40-205ENST00000486941 SPDYE3A6NKU9 549 aa7.96□□□□□ -1.14
SNRNP40-205ENST00000486941 APBA3O96018 575 aa7.96□□□□□ -1.14
SNRNP40-205ENST00000486941 TARSP26639 723 aaKnown RBP7.96□□□□□ -1.14
SNRNP40-205ENST00000486941 IDH3AP50213 366 aa7.96□□□□□ -1.14
SNRNP40-205ENST00000486941 DGKZQ13574 1117 aa7.96□□□□□ -1.14
SNRNP40-205ENST00000486941 PSAPL1Q6NUJ1 521 aa7.96□□□□□ -1.14
SNRNP40-205ENST00000486941 JPH1Q9HDC5 661 aaPredicted RBP7.96□□□□□ -1.14
SNRNP40-205ENST00000486941 DYRK3O43781 588 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms