RNA–Protein interactions for RNA: ENST00000485901.1

HLA-DOA-204, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-204ENST00000485901 HACL1Q9UJ83 578 aa15.56■□□□□ 0.08
HLA-DOA-204ENST00000485901 NIP7Q9Y221 180 aaKnown RBP eCLIP15.56■□□□□ 0.08
HLA-DOA-204ENST00000485901 RIC1Q4ADV7 1423 aa15.55■□□□□ 0.08
HLA-DOA-204ENST00000485901 TMEM88BA6NKF7 163 aa15.55■□□□□ 0.08
HLA-DOA-204ENST00000485901 NBPF26B4DH59 902 aa15.55■□□□□ 0.08
HLA-DOA-204ENST00000485901 CRY2Q49AN0 593 aa15.55■□□□□ 0.08
HLA-DOA-204ENST00000485901 NBPF10Q6P3W6 841 aaKnown RBP15.55■□□□□ 0.08
HLA-DOA-204ENST00000485901 CCDC24Q8N4L8 307 aa15.55■□□□□ 0.08
HLA-DOA-204ENST00000485901 NBPF15Q8N660 670 aa15.55■□□□□ 0.08
HLA-DOA-204ENST00000485901 MBIPQ9NS73 344 aa15.55■□□□□ 0.08
HLA-DOA-204ENST00000485901 KDM3BQ7LBC6 1761 aa15.54■□□□□ 0.08
HLA-DOA-204ENST00000485901 IBTKQ9P2D0 1353 aaPredicted RBP15.54■□□□□ 0.08
HLA-DOA-204ENST00000485901 ITGBL1O95965 494 aaPredicted RBP15.54■□□□□ 0.08
HLA-DOA-204ENST00000485901 EIF2S2P20042 333 aaKnown RBP15.54■□□□□ 0.08
HLA-DOA-204ENST00000485901 PIP4K2AP48426 406 aaPredicted RBP15.54■□□□□ 0.08
HLA-DOA-204ENST00000485901 GPC2Q8N158 579 aa15.54■□□□□ 0.08
HLA-DOA-204ENST00000485901 SALL2Q9Y467 1007 aaPredicted RBP15.54■□□□□ 0.08
HLA-DOA-204ENST00000485901 ERBB4Q15303 1308 aa15.53■□□□□ 0.08
HLA-DOA-204ENST00000485901 IARSP41252 1262 aaKnown RBP15.53■□□□□ 0.08
HLA-DOA-204ENST00000485901 VPS33BQ9H267 617 aa15.53■□□□□ 0.08
HLA-DOA-204ENST00000485901 ADAMTSL1Q8N6G6 1762 aa15.53■□□□□ 0.08
HLA-DOA-204ENST00000485901 NUP98P52948 1817 aa15.52■□□□□ 0.08
HLA-DOA-204ENST00000485901 LAMB4A4D0S4 1761 aa15.52■□□□□ 0.08
HLA-DOA-204ENST00000485901 IL16Q14005 1332 aa15.52■□□□□ 0.08
HLA-DOA-204ENST00000485901 HOXB7P09629 217 aa15.52■□□□□ 0.08
HLA-DOA-204ENST00000485901 POTEIP0CG38 1075 aa15.52■□□□□ 0.08
HLA-DOA-204ENST00000485901 POTEJP0CG39 1038 aa15.52■□□□□ 0.08
HLA-DOA-204ENST00000485901 GTF2E1P29083 439 aaPredicted RBP15.52■□□□□ 0.08
HLA-DOA-204ENST00000485901 CTCFP49711 727 aaPredicted RBP15.52■□□□□ 0.08
HLA-DOA-204ENST00000485901 WDR63Q8IWG1 891 aa15.52■□□□□ 0.08
HLA-DOA-204ENST00000485901 JDP2Q8WYK2 163 aa15.52■□□□□ 0.08
HLA-DOA-204ENST00000485901 MKRN1Q9UHC7 482 aaKnown RBP15.52■□□□□ 0.08
HLA-DOA-204ENST00000485901 RASSF10A6NK89 507 aa15.51■□□□□ 0.07
HLA-DOA-204ENST00000485901 MYL6BP14649 208 aa15.51■□□□□ 0.07
HLA-DOA-204ENST00000485901 HOXA10P31260 410 aaPredicted RBP15.51■□□□□ 0.07
HLA-DOA-204ENST00000485901 EPHX2P34913 555 aa15.51■□□□□ 0.07
HLA-DOA-204ENST00000485901 KRT24Q2M2I5 525 aa15.51■□□□□ 0.07
HLA-DOA-204ENST00000485901 DUSP27Q5VZP5 1158 aa15.51■□□□□ 0.07
HLA-DOA-204ENST00000485901 MIER1Q8N108 512 aa15.51■□□□□ 0.07
HLA-DOA-204ENST00000485901 AIDAQ96BJ3 306 aa15.51■□□□□ 0.07
HLA-DOA-204ENST00000485901 SNED1Q8TER0 1413 aa15.51■□□□□ 0.07
HLA-DOA-204ENST00000485901 SYNE4Q8N205 404 aa15.5■□□□□ 0.07
HLA-DOA-204ENST00000485901 CHMP4AQ9BY43 222 aa15.5■□□□□ 0.07
HLA-DOA-204ENST00000485901 ZNF277Q9NRM2 450 aaPredicted RBP15.5■□□□□ 0.07
HLA-DOA-204ENST00000485901 WBP1LQ9NX94 342 aa15.5■□□□□ 0.07
HLA-DOA-204ENST00000485901 MAP3K15Q6ZN16 1313 aa15.49■□□□□ 0.07
HLA-DOA-204ENST00000485901 EIF6P56537 245 aaKnown RBP15.49■□□□□ 0.07
HLA-DOA-204ENST00000485901 MAP2K1Q02750 393 aaPredicted RBP15.49■□□□□ 0.07
HLA-DOA-204ENST00000485901 CNTROBQ8N137 903 aa15.49■□□□□ 0.07
HLA-DOA-204ENST00000485901 NECTIN2Q92692 538 aa15.49■□□□□ 0.07
HLA-DOA-204ENST00000485901 CRAMP1Q96RY5 1269 aa15.49■□□□□ 0.07
HLA-DOA-204ENST00000485901 FOXN1O15353 648 aa15.48■□□□□ 0.07
HLA-DOA-204ENST00000485901 CAPN15O75808 1086 aa15.48■□□□□ 0.07
HLA-DOA-204ENST00000485901 VEGFBP49765 207 aa15.48■□□□□ 0.07
HLA-DOA-204ENST00000485901 PDIA6Q15084 440 aa15.48■□□□□ 0.07
HLA-DOA-204ENST00000485901 HLFQ16534 295 aa15.48■□□□□ 0.07
HLA-DOA-204ENST00000485901 DEFB115Q30KQ5 88 aa15.48■□□□□ 0.07
HLA-DOA-204ENST00000485901 HDGFL1Q5TGJ6 251 aa15.48■□□□□ 0.07
HLA-DOA-204ENST00000485901 KIF6Q6ZMV9 814 aa15.48■□□□□ 0.07
HLA-DOA-204ENST00000485901 ZNF541Q9H0D2 1346 aa15.47■□□□□ 0.07
HLA-DOA-204ENST00000485901 ELL2O00472 640 aaPredicted RBP15.47■□□□□ 0.07
HLA-DOA-204ENST00000485901 EAPPQ56P03 285 aaPredicted RBP15.47■□□□□ 0.07
HLA-DOA-204ENST00000485901 DDX21Q9NR30 783 aaKnown RBP eCLIP15.47■□□□□ 0.07
HLA-DOA-204ENST00000485901 DBF4Q9UBU7 674 aaPredicted RBP15.47■□□□□ 0.07
HLA-DOA-204ENST00000485901 CLEC11AQ9Y240 323 aa15.47■□□□□ 0.07
HLA-DOA-204ENST00000485901 RNF123Q5XPI4 1314 aa15.46■□□□□ 0.07
HLA-DOA-204ENST00000485901 LMOD1P29536 600 aaPredicted RBP15.46■□□□□ 0.07
HLA-DOA-204ENST00000485901 PARP10Q53GL7 1025 aa15.46■□□□□ 0.07
HLA-DOA-204ENST00000485901 USP50Q70EL3 339 aaPredicted RBP15.46■□□□□ 0.07
HLA-DOA-204ENST00000485901 C8orf58Q8NAV2 365 aa15.46■□□□□ 0.07
HLA-DOA-204ENST00000485901 RPGRQ92834 1020 aaKnown RBP15.46■□□□□ 0.07
HLA-DOA-204ENST00000485901 TSR2Q969E8 191 aaKnown RBP15.46■□□□□ 0.07
HLA-DOA-204ENST00000485901 RBM17Q96I25 401 aaKnown RBP15.46■□□□□ 0.07
HLA-DOA-204ENST00000485901 TMX4Q9H1E5 349 aaPredicted RBP15.46■□□□□ 0.07
HLA-DOA-204ENST00000485901 TRPM7Q96QT4 1865 aa15.46■□□□□ 0.06
HLA-DOA-204ENST00000485901 GOLGA2Q08379 1002 aa15.45■□□□□ 0.06
HLA-DOA-204ENST00000485901 PROSER3Q2NL68 480 aa15.45■□□□□ 0.06
HLA-DOA-204ENST00000485901 GIGYF2Q6Y7W6 1299 aaKnown RBP15.45■□□□□ 0.06
HLA-DOA-204ENST00000485901 TTLL7Q6ZT98 887 aa15.45■□□□□ 0.06
HLA-DOA-204ENST00000485901 COPS6Q7L5N1 327 aa15.45■□□□□ 0.06
HLA-DOA-204ENST00000485901 LRP10Q7Z4F1 713 aa15.45■□□□□ 0.06
HLA-DOA-204ENST00000485901 PPP1R42Q7Z4L9 355 aa15.45■□□□□ 0.06
HLA-DOA-204ENST00000485901 CHPF2Q9P2E5 772 aa15.45■□□□□ 0.06
HLA-DOA-204ENST00000485901 ANXA1P04083 346 aa15.44■□□□□ 0.06
HLA-DOA-204ENST00000485901 ECE1P42892 770 aa15.44■□□□□ 0.06
HLA-DOA-204ENST00000485901 SLC10A5Q5PT55 438 aa15.44■□□□□ 0.06
HLA-DOA-204ENST00000485901 CCDC30Q5VVM6 783 aa15.44■□□□□ 0.06
HLA-DOA-204ENST00000485901 ZNF34Q8IZ26 560 aa15.44■□□□□ 0.06
HLA-DOA-204ENST00000485901 MYH16Q9H6N6 1097 aa15.44■□□□□ 0.06
HLA-DOA-204ENST00000485901 HYPKQ9NX55 129 aa15.44■□□□□ 0.06
HLA-DOA-204ENST00000485901 AIMP1Q12904 312 aaKnown RBP15.43■□□□□ 0.06
HLA-DOA-204ENST00000485901 TSPYL6Q8N831 410 aa15.43■□□□□ 0.06
HLA-DOA-204ENST00000485901 SUPT20HQ8NEM7 779 aa15.43■□□□□ 0.06
HLA-DOA-204ENST00000485901 XAGE3Q8WTP9 111 aa15.43■□□□□ 0.06
HLA-DOA-204ENST00000485901 ZBTB3Q9H5J0 574 aa15.43■□□□□ 0.06
HLA-DOA-204ENST00000485901 WDR33Q9C0J8 1336 aaKnown RBP15.43■□□□□ 0.06
HLA-DOA-204ENST00000485901 FAM177BA6PVY3 158 aa15.42■□□□□ 0.06
HLA-DOA-204ENST00000485901 TWISTNBQ3B726 338 aaPredicted RBP15.42■□□□□ 0.06
HLA-DOA-204ENST00000485901 OLFM4Q6UX06 510 aa15.42■□□□□ 0.06
HLA-DOA-204ENST00000485901 LARGE2Q8N3Y3 721 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms