RNA–Protein interactions for RNA: ENST00000485592.5

SMARCD3-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 820 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-211ENST00000485592 EIF6P56537 245 aaKnown RBP18.17■□□□□ 0.5
SMARCD3-211ENST00000485592 GRIPAP1Q4V328 841 aa18.17■□□□□ 0.5
SMARCD3-211ENST00000485592 MYL6BP14649 208 aa18.16■□□□□ 0.5
SMARCD3-211ENST00000485592 LMOD1P29536 600 aaPredicted RBP18.16■□□□□ 0.5
SMARCD3-211ENST00000485592 VEGFBP49765 207 aa18.16■□□□□ 0.5
SMARCD3-211ENST00000485592 EIF4A1P60842 406 aaKnown RBP18.16■□□□□ 0.5
SMARCD3-211ENST00000485592 CNTROBQ8N137 903 aa18.16■□□□□ 0.5
SMARCD3-211ENST00000485592 GPTP24298 496 aa18.15■□□□□ 0.5
SMARCD3-211ENST00000485592 CTCFP49711 727 aaPredicted RBP18.15■□□□□ 0.5
SMARCD3-211ENST00000485592 NFE2L2Q16236 605 aa18.15■□□□□ 0.5
SMARCD3-211ENST00000485592 MAP1SQ66K74 1059 aaPredicted RBP18.15■□□□□ 0.5
SMARCD3-211ENST00000485592 TTLL7Q6ZT98 887 aa18.15■□□□□ 0.5
SMARCD3-211ENST00000485592 PNNQ9H307 717 aaKnown RBP18.15■□□□□ 0.5
SMARCD3-211ENST00000485592 ZBTB3Q9H5J0 574 aa18.15■□□□□ 0.5
SMARCD3-211ENST00000485592 PRDM10Q9NQV6 1147 aa18.15■□□□□ 0.5
SMARCD3-211ENST00000485592 GJA3Q9Y6H8 435 aa18.15■□□□□ 0.5
SMARCD3-211ENST00000485592 UBN2Q6ZU65 1347 aa18.15■□□□□ 0.5
SMARCD3-211ENST00000485592 MAPK8IP3Q9UPT6 1336 aa18.15■□□□□ 0.5
SMARCD3-211ENST00000485592 HOXA10P31260 410 aaPredicted RBP18.14■□□□□ 0.49
SMARCD3-211ENST00000485592 RBM17Q96I25 401 aaKnown RBP18.14■□□□□ 0.49
SMARCD3-211ENST00000485592 ERBB4Q15303 1308 aa18.14■□□□□ 0.49
SMARCD3-211ENST00000485592 PPEF1O14829 653 aaPredicted RBP18.13■□□□□ 0.49
SMARCD3-211ENST00000485592 DEFB115Q30KQ5 88 aa18.13■□□□□ 0.49
SMARCD3-211ENST00000485592 SUSD4Q5VX71 490 aa18.13■□□□□ 0.49
SMARCD3-211ENST00000485592 PPP1R42Q7Z4L9 355 aa18.13■□□□□ 0.49
SMARCD3-211ENST00000485592 LARGE2Q8N3Y3 721 aa18.13■□□□□ 0.49
SMARCD3-211ENST00000485592 PLEKHF1Q96S99 279 aa18.13■□□□□ 0.49
SMARCD3-211ENST00000485592 TMX4Q9H1E5 349 aaPredicted RBP18.13■□□□□ 0.49
SMARCD3-211ENST00000485592 RASSF10A6NK89 507 aa18.12■□□□□ 0.49
SMARCD3-211ENST00000485592 GIGYF2Q6Y7W6 1299 aaKnown RBP18.12■□□□□ 0.49
SMARCD3-211ENST00000485592 CRAMP1Q96RY5 1269 aa18.12■□□□□ 0.49
SMARCD3-211ENST00000485592 THUMPD2Q9BTF0 503 aaKnown RBP18.12■□□□□ 0.49
SMARCD3-211ENST00000485592 ABT1Q9ULW3 272 aaKnown RBP18.12■□□□□ 0.49
SMARCD3-211ENST00000485592 COL4A5P29400 1685 aa18.12■□□□□ 0.49
SMARCD3-211ENST00000485592 NTSR2O95665 410 aa18.11■□□□□ 0.49
SMARCD3-211ENST00000485592 PARP10Q53GL7 1025 aa18.11■□□□□ 0.49
SMARCD3-211ENST00000485592 NIM1KQ8IY84 436 aa18.11■□□□□ 0.49
SMARCD3-211ENST00000485592 ZNF34Q8IZ26 560 aa18.11■□□□□ 0.49
SMARCD3-211ENST00000485592 LTBP1Q14766 1721 aa18.11■□□□□ 0.49
SMARCD3-211ENST00000485592 TCERG1O14776 1098 aaKnown RBP18.1■□□□□ 0.49
SMARCD3-211ENST00000485592 NLRP3Q96P20 1036 aa18.1■□□□□ 0.49
SMARCD3-211ENST00000485592 DDX21Q9NR30 783 aaKnown RBP eCLIP18.1■□□□□ 0.49
SMARCD3-211ENST00000485592 WBP1LQ9NX94 342 aa18.1■□□□□ 0.49
SMARCD3-211ENST00000485592 TSPYL4Q9UJ04 414 aa18.1■□□□□ 0.49
SMARCD3-211ENST00000485592 WDR33Q9C0J8 1336 aaKnown RBP18.09■□□□□ 0.49
SMARCD3-211ENST00000485592 SCNN1DP51172 638 aa18.09■□□□□ 0.49
SMARCD3-211ENST00000485592 PPIP5K2O43314 1243 aa18.08■□□□□ 0.48
SMARCD3-211ENST00000485592 MAP2K1Q02750 393 aaPredicted RBP18.08■□□□□ 0.48
SMARCD3-211ENST00000485592 USP50Q70EL3 339 aaPredicted RBP18.08■□□□□ 0.48
SMARCD3-211ENST00000485592 ANKRD36CQ5JPF3 1778 aa18.08■□□□□ 0.48
SMARCD3-211ENST00000485592 TRPM7Q96QT4 1865 aa18.07■□□□□ 0.48
SMARCD3-211ENST00000485592 EIF2S2P20042 333 aaKnown RBP18.07■□□□□ 0.48
SMARCD3-211ENST00000485592 EPS15P42566 896 aa18.07■□□□□ 0.48
SMARCD3-211ENST00000485592 LBX1P52954 281 aa18.07■□□□□ 0.48
SMARCD3-211ENST00000485592 UTP14AQ9BVJ6 771 aaKnown RBP18.07■□□□□ 0.48
SMARCD3-211ENST00000485592 VPS33BQ9H267 617 aa18.07■□□□□ 0.48
SMARCD3-211ENST00000485592 C3orf67Q6ZVT6 689 aa18.06■□□□□ 0.48
SMARCD3-211ENST00000485592 PAXIP1Q6ZW49 1069 aaPredicted RBP18.06■□□□□ 0.48
SMARCD3-211ENST00000485592 SUPT20HQ8NEM7 779 aa18.06■□□□□ 0.48
SMARCD3-211ENST00000485592 THSD7BQ9C0I4 1608 aa18.05■□□□□ 0.48
SMARCD3-211ENST00000485592 LAMB2P55268 1798 aa18.05■□□□□ 0.48
SMARCD3-211ENST00000485592 ECE1P42892 770 aa18.05■□□□□ 0.48
SMARCD3-211ENST00000485592 AOC3Q16853 763 aa18.05■□□□□ 0.48
SMARCD3-211ENST00000485592 ATP6V0A2Q9Y487 856 aa18.05■□□□□ 0.48
SMARCD3-211ENST00000485592 ABCC4O15439 1325 aa18.04■□□□□ 0.48
SMARCD3-211ENST00000485592 HSPA8P11142 646 aaKnown RBP18.04■□□□□ 0.48
SMARCD3-211ENST00000485592 RIPK4P57078 832 aa18.04■□□□□ 0.48
SMARCD3-211ENST00000485592 LMOD3Q0VAK6 560 aa18.04■□□□□ 0.48
SMARCD3-211ENST00000485592 HSP90AB3PQ58FF7 597 aa18.04■□□□□ 0.48
SMARCD3-211ENST00000485592 SLC51AQ86UW1 340 aa18.04■□□□□ 0.48
SMARCD3-211ENST00000485592 BEGAINQ9BUH8 593 aa18.04■□□□□ 0.48
SMARCD3-211ENST00000485592 ADARB2Q9NS39 739 aaKnown RBP18.04■□□□□ 0.48
SMARCD3-211ENST00000485592 BABAM1Q9NWV8 329 aa18.04■□□□□ 0.48
SMARCD3-211ENST00000485592 PDIA6Q15084 440 aa18.03■□□□□ 0.48
SMARCD3-211ENST00000485592 SLC10A5Q5PT55 438 aa18.03■□□□□ 0.48
SMARCD3-211ENST00000485592 LRP10Q7Z4F1 713 aa18.03■□□□□ 0.48
SMARCD3-211ENST00000485592 GPRC5DQ9NZD1 345 aa18.03■□□□□ 0.48
SMARCD3-211ENST00000485592 DPP8Q6V1X1 898 aaPredicted RBP18.02■□□□□ 0.48
SMARCD3-211ENST00000485592 CAPNS2Q96L46 248 aa18.02■□□□□ 0.48
SMARCD3-211ENST00000485592 ZNRF3Q9ULT6 936 aa18.02■□□□□ 0.48
SMARCD3-211ENST00000485592 BBOX1O75936 387 aa18.01■□□□□ 0.47
SMARCD3-211ENST00000485592 ANXA1P04083 346 aa18.01■□□□□ 0.47
SMARCD3-211ENST00000485592 FMR1Q06787 632 aaKnown RBP eCLIP18.01■□□□□ 0.47
SMARCD3-211ENST00000485592 GRM1Q13255 1194 aa18.01■□□□□ 0.47
SMARCD3-211ENST00000485592 PROSER3Q2NL68 480 aa18.01■□□□□ 0.47
SMARCD3-211ENST00000485592 RTFDC1Q9BY42 306 aaPredicted RBP18.01■□□□□ 0.47
SMARCD3-211ENST00000485592 TRAF5O00463 557 aa18■□□□□ 0.47
SMARCD3-211ENST00000485592 CXCL9Q07325 125 aa18■□□□□ 0.47
SMARCD3-211ENST00000485592 AIMP1Q12904 312 aaKnown RBP18■□□□□ 0.47
SMARCD3-211ENST00000485592 CYP4F22Q6NT55 531 aa18■□□□□ 0.47
SMARCD3-211ENST00000485592 DDX46Q7L014 1031 aaKnown RBP18■□□□□ 0.47
SMARCD3-211ENST00000485592 COPS6Q7L5N1 327 aa18■□□□□ 0.47
SMARCD3-211ENST00000485592 SP8Q8IXZ3 490 aa18■□□□□ 0.47
SMARCD3-211ENST00000485592 MPNDQ8N594 471 aa18■□□□□ 0.47
SMARCD3-211ENST00000485592 TLL2Q9Y6L7 1015 aa18■□□□□ 0.47
SMARCD3-211ENST00000485592 CDHR2Q9BYE9 1310 aa17.99■□□□□ 0.47
SMARCD3-211ENST00000485592 CST9Q5W186 159 aa17.99■□□□□ 0.47
SMARCD3-211ENST00000485592 CIAPIN1Q6FI81 312 aa17.99■□□□□ 0.47
SMARCD3-211ENST00000485592 NLRP10Q86W26 655 aa17.99■□□□□ 0.47
SMARCD3-211ENST00000485592 XAGE3Q8WTP9 111 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms