RNA–Protein interactions for RNA: ENST00000484979.5

PCDH17-202, Transcript of protocadherin 17, humanhuman

TSL 1 (best)

Gene PCDH17, Length 4,471 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17-202ENST00000484979 MCM5P33992 734 aa18.49■□□□□ 0.55
PCDH17-202ENST00000484979 UBA7P41226 1012 aa18.49■□□□□ 0.55
PCDH17-202ENST00000484979 NCKAP5LQ9HCH0 1330 aa18.48■□□□□ 0.55
PCDH17-202ENST00000484979 CTAGE5O15320 804 aa18.48■□□□□ 0.55
PCDH17-202ENST00000484979 CYP7A1P22680 504 aa18.48■□□□□ 0.55
PCDH17-202ENST00000484979 MTHFSDQ2M296 383 aaKnown RBP18.48■□□□□ 0.55
PCDH17-202ENST00000484979 ARHGAP29Q52LW3 1261 aa18.48■□□□□ 0.55
PCDH17-202ENST00000484979 FKBP15Q5T1M5 1219 aa18.48■□□□□ 0.55
PCDH17-202ENST00000484979 IP6K1Q92551 441 aa18.48■□□□□ 0.55
PCDH17-202ENST00000484979 IBSPP21815 317 aaPredicted RBP18.48■□□□□ 0.55
PCDH17-202ENST00000484979 ANKRD44Q8N8A2 993 aa18.48■□□□□ 0.55
PCDH17-202ENST00000484979 VPS36Q86VN1 386 aa18.48■□□□□ 0.55
PCDH17-202ENST00000484979 KLHL10Q6JEL2 608 aa18.47■□□□□ 0.55
PCDH17-202ENST00000484979 ESR2Q92731 530 aa18.47■□□□□ 0.55
PCDH17-202ENST00000484979 EYA1Q99502 592 aa18.47■□□□□ 0.55
PCDH17-202ENST00000484979 GRPEL1Q9HAV7 217 aa18.47■□□□□ 0.55
PCDH17-202ENST00000484979 VAT1LQ9HCJ6 419 aa18.47■□□□□ 0.55
PCDH17-202ENST00000484979 LMTK3Q96Q04 1460 aa18.47■□□□□ 0.55
PCDH17-202ENST00000484979 POLD1P28340 1107 aa18.47■□□□□ 0.55
PCDH17-202ENST00000484979 UBA5Q9GZZ9 404 aa18.47■□□□□ 0.55
PCDH17-202ENST00000484979 GNAQP50148 359 aa18.47■□□□□ 0.55
PCDH17-202ENST00000484979 CCDC112Q8NEF3 446 aa18.47■□□□□ 0.55
PCDH17-202ENST00000484979 TRPM2O94759 1503 aa18.47■□□□□ 0.55
PCDH17-202ENST00000484979 METAP2P50579 478 aaKnown RBP eCLIP18.47■□□□□ 0.55
PCDH17-202ENST00000484979 HDAC1Q13547 482 aaPredicted RBP18.47■□□□□ 0.55
PCDH17-202ENST00000484979 NAA16Q6N069 864 aaPredicted RBP18.47■□□□□ 0.55
PCDH17-202ENST00000484979 TBC1D9Q6ZT07 1266 aa18.47■□□□□ 0.55
PCDH17-202ENST00000484979 TAF4BQ92750 862 aa18.47■□□□□ 0.55
PCDH17-202ENST00000484979 AMPD3Q01432 767 aa18.46■□□□□ 0.55
PCDH17-202ENST00000484979 PYM1Q9BRP8 204 aaKnown RBP18.46■□□□□ 0.55
PCDH17-202ENST00000484979 KRT23Q9C075 422 aa18.46■□□□□ 0.55
PCDH17-202ENST00000484979 ZRANB1Q9UGI0 708 aa18.46■□□□□ 0.55
PCDH17-202ENST00000484979 POLR3AO14802 1390 aaPredicted RBP18.46■□□□□ 0.55
PCDH17-202ENST00000484979 ATP8B2P98198 1209 aa18.46■□□□□ 0.55
PCDH17-202ENST00000484979 C8orf58Q8NAV2 365 aa18.46■□□□□ 0.55
PCDH17-202ENST00000484979 CALML4Q96GE6 196 aa18.46■□□□□ 0.55
PCDH17-202ENST00000484979 MPHOSPH6Q99547 160 aaKnown RBP18.46■□□□□ 0.55
PCDH17-202ENST00000484979 PRAG1Q86YV5 1406 aa18.46■□□□□ 0.55
PCDH17-202ENST00000484979 CETN1Q12798 172 aa18.46■□□□□ 0.55
PCDH17-202ENST00000484979 TTC22Q5TAA0 569 aa18.46■□□□□ 0.55
PCDH17-202ENST00000484979 IQCEQ6IPM2 695 aa18.46■□□□□ 0.55
PCDH17-202ENST00000484979 GOLGA6L10A6NI86 522 aa18.45■□□□□ 0.54
PCDH17-202ENST00000484979 FAM177A1Q8N128 213 aaPredicted RBP18.45■□□□□ 0.54
PCDH17-202ENST00000484979 CNNM3Q8NE01 707 aa18.45■□□□□ 0.54
PCDH17-202ENST00000484979 MAP7D2Q96T17 732 aa18.45■□□□□ 0.54
PCDH17-202ENST00000484979 CNNM2Q9H8M5 875 aa18.45■□□□□ 0.54
PCDH17-202ENST00000484979 NSFL1CQ9UNZ2 370 aaKnown RBP18.45■□□□□ 0.54
PCDH17-202ENST00000484979 UGGT2Q9NYU1 1516 aa18.45■□□□□ 0.54
PCDH17-202ENST00000484979 AXDND1Q5T1B0 1012 aaPredicted RBP18.45■□□□□ 0.54
PCDH17-202ENST00000484979 ASXL1Q8IXJ9 1541 aa18.45■□□□□ 0.54
PCDH17-202ENST00000484979 SOS1Q07889 1333 aaPredicted RBP18.45■□□□□ 0.54
PCDH17-202ENST00000484979 MAP3K19Q56UN5 1328 aa18.45■□□□□ 0.54
PCDH17-202ENST00000484979 NEBLO76041 1014 aa18.45■□□□□ 0.54
PCDH17-202ENST00000484979 IDEP14735 1019 aa18.45■□□□□ 0.54
PCDH17-202ENST00000484979 SFPQP23246 707 aaKnown RBP eCLIP18.45■□□□□ 0.54
PCDH17-202ENST00000484979 WTAPQ15007 396 aa18.45■□□□□ 0.54
PCDH17-202ENST00000484979 KIAA1328Q86T90 577 aa18.45■□□□□ 0.54
PCDH17-202ENST00000484979 CACNA2D4Q7Z3S7 1137 aa18.45■□□□□ 0.54
PCDH17-202ENST00000484979 ZNF804AQ7Z570 1209 aa18.45■□□□□ 0.54
PCDH17-202ENST00000484979 JDP2Q8WYK2 163 aa18.45■□□□□ 0.54
PCDH17-202ENST00000484979 IQSEC3Q9UPP2 1182 aaPredicted RBP18.44■□□□□ 0.54
PCDH17-202ENST00000484979 ERLIN1O75477 346 aa18.44■□□□□ 0.54
PCDH17-202ENST00000484979 STXBP4Q6ZWJ1 553 aa18.44■□□□□ 0.54
PCDH17-202ENST00000484979 PLCG2P16885 1265 aa18.44■□□□□ 0.54
PCDH17-202ENST00000484979 DDX19AQ9NUU7 478 aaKnown RBP18.44■□□□□ 0.54
PCDH17-202ENST00000484979 BTG4Q9NY30 223 aa18.44■□□□□ 0.54
PCDH17-202ENST00000484979 PARP3Q9Y6F1 533 aa18.44■□□□□ 0.54
PCDH17-202ENST00000484979 PCDH11XQ9BZA7 1347 aa18.43■□□□□ 0.54
PCDH17-202ENST00000484979 PCDH11YQ9BZA8 1340 aa18.43■□□□□ 0.54
PCDH17-202ENST00000484979 SLC9C2Q5TAH2 1124 aa18.43■□□□□ 0.54
PCDH17-202ENST00000484979 SPA17Q15506 151 aa18.43■□□□□ 0.54
PCDH17-202ENST00000484979 MPNDQ8N594 471 aa18.43■□□□□ 0.54
PCDH17-202ENST00000484979 SSR1P43307 286 aaKnown RBP18.43■□□□□ 0.54
PCDH17-202ENST00000484979 PDE1AP54750 535 aa18.43■□□□□ 0.54
PCDH17-202ENST00000484979 CAMK4Q16566 473 aa18.43■□□□□ 0.54
PCDH17-202ENST00000484979 CCDC183Q5T5S1 534 aa18.43■□□□□ 0.54
PCDH17-202ENST00000484979 DDX21Q9NR30 783 aaKnown RBP eCLIP18.43■□□□□ 0.54
PCDH17-202ENST00000484979 MYCNP04198 464 aaPredicted RBP18.42■□□□□ 0.54
PCDH17-202ENST00000484979 SEPT7Q16181 437 aaKnown RBP18.42■□□□□ 0.54
PCDH17-202ENST00000484979 TESK2Q96S53 571 aa18.42■□□□□ 0.54
PCDH17-202ENST00000484979 EYA3Q99504 573 aa18.42■□□□□ 0.54
PCDH17-202ENST00000484979 PTPRKQ15262 1439 aa18.42■□□□□ 0.54
PCDH17-202ENST00000484979 IRS4O14654 1257 aaPredicted RBP18.42■□□□□ 0.54
PCDH17-202ENST00000484979 TSPY3P0CV98 308 aa18.42■□□□□ 0.54
PCDH17-202ENST00000484979 TSPY8P0CW00 308 aa18.42■□□□□ 0.54
PCDH17-202ENST00000484979 SYCE3A1L190 88 aa18.42■□□□□ 0.54
PCDH17-202ENST00000484979 ZBTB43O43298 467 aa18.42■□□□□ 0.54
PCDH17-202ENST00000484979 BRF1Q92994 677 aa18.42■□□□□ 0.54
PCDH17-202ENST00000484979 MAP3K5Q99683 1374 aa18.41■□□□□ 0.54
PCDH17-202ENST00000484979 BMP15O95972 392 aa18.41■□□□□ 0.54
PCDH17-202ENST00000484979 JAKMIP3Q5VZ66 844 aa18.41■□□□□ 0.54
PCDH17-202ENST00000484979 FSIP1Q8NA03 581 aa18.41■□□□□ 0.54
PCDH17-202ENST00000484979 SLC26A6Q9BXS9 759 aa18.41■□□□□ 0.54
PCDH17-202ENST00000484979 STX6O43752 255 aa18.41■□□□□ 0.54
PCDH17-202ENST00000484979 HOXC9P31274 260 aa18.41■□□□□ 0.54
PCDH17-202ENST00000484979 SLC4A4Q9Y6R1 1079 aa18.41■□□□□ 0.54
PCDH17-202ENST00000484979 ABCC2Q92887 1545 aa18.41■□□□□ 0.54
PCDH17-202ENST00000484979 ZRSR2Q15696 482 aaKnown RBP18.41■□□□□ 0.54
PCDH17-202ENST00000484979 SKIDA1Q1XH10 827 aa18.41■□□□□ 0.54
PCDH17-202ENST00000484979 MCMDC2Q4G0Z9 681 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms