RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 CHADLQ6NUI6 762 aa15.01□□□□□ -0.01
SCFD1-206ENST00000484733 RBM17Q96I25 401 aaKnown RBP15.01□□□□□ -0.01
SCFD1-206ENST00000484733 ZNF277Q9NRM2 450 aaPredicted RBP15.01□□□□□ -0.01
SCFD1-206ENST00000484733 RNF123Q5XPI4 1314 aa15.01□□□□□ -0.01
SCFD1-206ENST00000484733 EIF2S2P20042 333 aaKnown RBP15.01□□□□□ -0.01
SCFD1-206ENST00000484733 IARSP41252 1262 aaKnown RBP15.01□□□□□ -0.01
SCFD1-206ENST00000484733 OLFM4Q6UX06 510 aa15.01□□□□□ -0.01
SCFD1-206ENST00000484733 RPGRQ92834 1020 aaKnown RBP15.01□□□□□ -0.01
SCFD1-206ENST00000484733 TRIM35Q9UPQ4 493 aa15.01□□□□□ -0.01
SCFD1-206ENST00000484733 FZD9O00144 591 aa15□□□□□ -0.01
SCFD1-206ENST00000484733 WDR43Q15061 677 aaKnown RBP eCLIP15□□□□□ -0.01
SCFD1-206ENST00000484733 ANKRD36CQ5JPF3 1778 aa15□□□□□ -0.01
SCFD1-206ENST00000484733 PROSER3Q2NL68 480 aa15□□□□□ -0.01
SCFD1-206ENST00000484733 HSP90AB3PQ58FF7 597 aa15□□□□□ -0.01
SCFD1-206ENST00000484733 CCDC146Q8IYE0 955 aa14.99□□□□□ -0.01
SCFD1-206ENST00000484733 UTP14AQ9BVJ6 771 aaKnown RBP14.99□□□□□ -0.01
SCFD1-206ENST00000484733 DDX21Q9NR30 783 aaKnown RBP eCLIP14.99□□□□□ -0.01
SCFD1-206ENST00000484733 HOXB7P09629 217 aa14.99□□□□□ -0.01
SCFD1-206ENST00000484733 TAF1DQ9H5J8 278 aaPredicted RBP14.99□□□□□ -0.01
SCFD1-206ENST00000484733 ZNF541Q9H0D2 1346 aa14.99□□□□□ -0.01
SCFD1-206ENST00000484733 LDHDQ86WU2 507 aa14.98□□□□□ -0.01
SCFD1-206ENST00000484733 NLRP3Q96P20 1036 aa14.98□□□□□ -0.01
SCFD1-206ENST00000484733 ADAMTS8Q9UP79 889 aa14.98□□□□□ -0.01
SCFD1-206ENST00000484733 COPS6Q7L5N1 327 aa14.98□□□□□ -0.01
SCFD1-206ENST00000484733 XAGE3Q8WTP9 111 aa14.97□□□□□ -0.01
SCFD1-206ENST00000484733 VPS33BQ9H267 617 aa14.97□□□□□ -0.01
SCFD1-206ENST00000484733 PRKRIP1Q9H875 184 aaPredicted RBP14.97□□□□□ -0.01
SCFD1-206ENST00000484733 PPEF1O14829 653 aaPredicted RBP14.97□□□□□ -0.01
SCFD1-206ENST00000484733 ANXA1P04083 346 aa14.97□□□□□ -0.01
SCFD1-206ENST00000484733 TCIRG1Q13488 830 aa14.97□□□□□ -0.01
SCFD1-206ENST00000484733 NEUROD2Q15784 382 aa14.97□□□□□ -0.01
SCFD1-206ENST00000484733 C3orf67Q6ZVT6 689 aa14.97□□□□□ -0.01
SCFD1-206ENST00000484733 GPC2Q8N158 579 aa14.97□□□□□ -0.01
SCFD1-206ENST00000484733 HACL1Q9UJ83 578 aa14.97□□□□□ -0.01
SCFD1-206ENST00000484733 ADAMTSL1Q8N6G6 1762 aa14.96□□□□□ -0.01
SCFD1-206ENST00000484733 POTEIP0CG38 1075 aa14.96□□□□□ -0.01
SCFD1-206ENST00000484733 POTEJP0CG39 1038 aa14.96□□□□□ -0.01
SCFD1-206ENST00000484733 NLRP10Q86W26 655 aa14.96□□□□□ -0.01
SCFD1-206ENST00000484733 JDP2Q8WYK2 163 aa14.96□□□□□ -0.01
SCFD1-206ENST00000484733 CREBZFQ9NS37 354 aa14.96□□□□□ -0.01
SCFD1-206ENST00000484733 CFAP44Q96MT7 982 aa14.95□□□□□ -0.02
SCFD1-206ENST00000484733 PASKQ96RG2 1323 aa14.95□□□□□ -0.02
SCFD1-206ENST00000484733 ATP6V0A2Q9Y487 856 aa14.95□□□□□ -0.02
SCFD1-206ENST00000484733 LAMB2P55268 1798 aa14.95□□□□□ -0.02
SCFD1-206ENST00000484733 KRT24Q2M2I5 525 aa14.94□□□□□ -0.02
SCFD1-206ENST00000484733 PNMA8AQ86V59 439 aaPredicted RBP14.94□□□□□ -0.02
SCFD1-206ENST00000484733 COL4A5P29400 1685 aa14.94□□□□□ -0.02
SCFD1-206ENST00000484733 BBOX1O75936 387 aa14.94□□□□□ -0.02
SCFD1-206ENST00000484733 EPHX2P34913 555 aa14.94□□□□□ -0.02
SCFD1-206ENST00000484733 EIF6P56537 245 aaKnown RBP14.94□□□□□ -0.02
SCFD1-206ENST00000484733 AIMP1Q12904 312 aaKnown RBP14.94□□□□□ -0.02
SCFD1-206ENST00000484733 NECTIN2Q92692 538 aa14.94□□□□□ -0.02
SCFD1-206ENST00000484733 LAS1LQ9Y4W2 734 aaKnown RBP14.94□□□□□ -0.02
SCFD1-206ENST00000484733 ZNF853P0CG23 659 aa14.93□□□□□ -0.02
SCFD1-206ENST00000484733 PLBD2Q8NHP8 589 aa14.93□□□□□ -0.02
SCFD1-206ENST00000484733 RTFDC1Q9BY42 306 aaPredicted RBP14.93□□□□□ -0.02
SCFD1-206ENST00000484733 CHPF2Q9P2E5 772 aa14.93□□□□□ -0.02
SCFD1-206ENST00000484733 DBF4Q9UBU7 674 aaPredicted RBP14.93□□□□□ -0.02
SCFD1-206ENST00000484733 ABCC4O15439 1325 aa14.93□□□□□ -0.02
SCFD1-206ENST00000484733 HDGFL1Q5TGJ6 251 aa14.93□□□□□ -0.02
SCFD1-206ENST00000484733 TMX4Q9H1E5 349 aaPredicted RBP14.93□□□□□ -0.02
SCFD1-206ENST00000484733 SH3TC1Q8TE82 1336 aa14.92□□□□□ -0.02
SCFD1-206ENST00000484733 ITGBL1O95965 494 aaPredicted RBP14.92□□□□□ -0.02
SCFD1-206ENST00000484733 SP8Q8IXZ3 490 aa14.92□□□□□ -0.02
SCFD1-206ENST00000484733 LARGE2Q8N3Y3 721 aa14.92□□□□□ -0.02
SCFD1-206ENST00000484733 SUPT20HQ8NEM7 779 aa14.92□□□□□ -0.02
SCFD1-206ENST00000484733 ISCA1Q9BUE6 129 aa14.92□□□□□ -0.02
SCFD1-206ENST00000484733 HYPKQ9NX55 129 aa14.92□□□□□ -0.02
SCFD1-206ENST00000484733 TRMT112Q9UI30 125 aaKnown RBP14.92□□□□□ -0.02
SCFD1-206ENST00000484733 ANKRD13DQ6ZTN6 518 aa14.91□□□□□ -0.02
SCFD1-206ENST00000484733 CALD1Q05682 793 aaKnown RBP14.91□□□□□ -0.02
SCFD1-206ENST00000484733 DUSP27Q5VZP5 1158 aa14.91□□□□□ -0.02
SCFD1-206ENST00000484733 TMC4Q7Z404 712 aa14.91□□□□□ -0.02
SCFD1-206ENST00000484733 MBIPQ9NS73 344 aa14.91□□□□□ -0.02
SCFD1-206ENST00000484733 IFT57Q9NWB7 429 aa14.91□□□□□ -0.02
SCFD1-206ENST00000484733 HCLS1P14317 486 aaPredicted RBP14.9□□□□□ -0.02
SCFD1-206ENST00000484733 TRIM28Q13263 835 aaKnown RBP14.9□□□□□ -0.02
SCFD1-206ENST00000484733 GRAPQ13588 217 aa14.9□□□□□ -0.02
SCFD1-206ENST00000484733 EAPPQ56P03 285 aaPredicted RBP14.9□□□□□ -0.02
SCFD1-206ENST00000484733 NIM1KQ8IY84 436 aa14.9□□□□□ -0.02
SCFD1-206ENST00000484733 GRAPLQ8TC17 118 aaPredicted RBP14.9□□□□□ -0.02
SCFD1-206ENST00000484733 DDX46Q7L014 1031 aaKnown RBP14.89□□□□□ -0.03
SCFD1-206ENST00000484733 LTBP1Q14766 1721 aa14.89□□□□□ -0.03
SCFD1-206ENST00000484733 DDX60Q8IY21 1712 aaKnown RBP14.89□□□□□ -0.03
SCFD1-206ENST00000484733 CNTNAP1P78357 1384 aa14.89□□□□□ -0.03
SCFD1-206ENST00000484733 TCERG1O14776 1098 aaKnown RBP14.89□□□□□ -0.03
SCFD1-206ENST00000484733 PPIP5K2O43314 1243 aa14.89□□□□□ -0.03
SCFD1-206ENST00000484733 GNAI1P63096 354 aa14.89□□□□□ -0.03
SCFD1-206ENST00000484733 SLC51AQ86UW1 340 aa14.89□□□□□ -0.03
SCFD1-206ENST00000484733 CLEC11AQ9Y240 323 aa14.89□□□□□ -0.03
SCFD1-206ENST00000484733 GJA3Q9Y6H8 435 aa14.89□□□□□ -0.03
SCFD1-206ENST00000484733 TMEM88BA6NKF7 163 aa14.88□□□□□ -0.03
SCFD1-206ENST00000484733 APAF1O14727 1248 aa14.88□□□□□ -0.03
SCFD1-206ENST00000484733 LMOD1P29536 600 aaPredicted RBP14.88□□□□□ -0.03
SCFD1-206ENST00000484733 SF3B3Q15393 1217 aaKnown RBP14.88□□□□□ -0.03
SCFD1-206ENST00000484733 HSPA1AP0DMV8 641 aaKnown RBP14.88□□□□□ -0.03
SCFD1-206ENST00000484733 HSPA1BP0DMV9 641 aaKnown RBP14.88□□□□□ -0.03
SCFD1-206ENST00000484733 SCNN1DP51172 638 aa14.88□□□□□ -0.03
SCFD1-206ENST00000484733 CNTROBQ8N137 903 aa14.88□□□□□ -0.03
SCFD1-206ENST00000484733 MPNDQ8N594 471 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms