RNA–Protein interactions for RNA: ENST00000483563.5

ARRDC1-209, Transcript of arrestin domain containing 1, humanhuman

TSL 3

Gene ARRDC1, Length 704 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARRDC1-209ENST00000483563 EAPPQ56P03 285 aaPredicted RBP23.61■■□□□ 1.37
ARRDC1-209ENST00000483563 ZBTB3Q9H5J0 574 aa23.61■■□□□ 1.37
ARRDC1-209ENST00000483563 HACL1Q9UJ83 578 aa23.61■■□□□ 1.37
ARRDC1-209ENST00000483563 RIC1Q4ADV7 1423 aa23.6■■□□□ 1.37
ARRDC1-209ENST00000483563 ZEB1P37275 1124 aaPredicted RBP23.6■■□□□ 1.37
ARRDC1-209ENST00000483563 VEGFBP49765 207 aa23.6■■□□□ 1.37
ARRDC1-209ENST00000483563 TRIM35Q9UPQ4 493 aa23.6■■□□□ 1.37
ARRDC1-209ENST00000483563 CLEC11AQ9Y240 323 aa23.6■■□□□ 1.37
ARRDC1-209ENST00000483563 ABCC12Q96J65 1359 aa23.58■■□□□ 1.37
ARRDC1-209ENST00000483563 CHL1O00533 1208 aa23.58■■□□□ 1.37
ARRDC1-209ENST00000483563 GIGYF2Q6Y7W6 1299 aaKnown RBP23.58■■□□□ 1.37
ARRDC1-209ENST00000483563 PNMA8AQ86V59 439 aaPredicted RBP23.58■■□□□ 1.37
ARRDC1-209ENST00000483563 RTKN2Q8IZC4 609 aa23.58■■□□□ 1.37
ARRDC1-209ENST00000483563 C7orf43Q8WVR3 580 aa23.58■■□□□ 1.37
ARRDC1-209ENST00000483563 LAS1LQ9Y4W2 734 aaKnown RBP23.58■■□□□ 1.37
ARRDC1-209ENST00000483563 UBN2Q6ZU65 1347 aa23.58■■□□□ 1.36
ARRDC1-209ENST00000483563 ADAMTSL1Q8N6G6 1762 aa23.57■■□□□ 1.36
ARRDC1-209ENST00000483563 ITGBL1O95965 494 aaPredicted RBP23.57■■□□□ 1.36
ARRDC1-209ENST00000483563 GPTP24298 496 aa23.57■■□□□ 1.36
ARRDC1-209ENST00000483563 ZNF541Q9H0D2 1346 aa23.57■■□□□ 1.36
ARRDC1-209ENST00000483563 LAMB2P55268 1798 aa23.56■■□□□ 1.36
ARRDC1-209ENST00000483563 ALDH1B1P30837 517 aa23.56■■□□□ 1.36
ARRDC1-209ENST00000483563 EPHX2P34913 555 aa23.56■■□□□ 1.36
ARRDC1-209ENST00000483563 PDIA6Q15084 440 aa23.56■■□□□ 1.36
ARRDC1-209ENST00000483563 LRP10Q7Z4F1 713 aa23.56■■□□□ 1.36
ARRDC1-209ENST00000483563 NUTM1Q86Y26 1132 aa23.56■■□□□ 1.36
ARRDC1-209ENST00000483563 ZNF34Q8IZ26 560 aa23.56■■□□□ 1.36
ARRDC1-209ENST00000483563 ZNF277Q9NRM2 450 aaPredicted RBP23.56■■□□□ 1.36
ARRDC1-209ENST00000483563 WBP1LQ9NX94 342 aa23.56■■□□□ 1.36
ARRDC1-209ENST00000483563 PROSER3Q2NL68 480 aa23.55■■□□□ 1.36
ARRDC1-209ENST00000483563 ANXA1P04083 346 aa23.54■■□□□ 1.36
ARRDC1-209ENST00000483563 DEFB115Q30KQ5 88 aa23.54■■□□□ 1.36
ARRDC1-209ENST00000483563 PARP10Q53GL7 1025 aa23.54■■□□□ 1.36
ARRDC1-209ENST00000483563 PPP1R42Q7Z4L9 355 aa23.54■■□□□ 1.36
ARRDC1-209ENST00000483563 NECTIN2Q92692 538 aa23.54■■□□□ 1.36
ARRDC1-209ENST00000483563 RASSF10A6NK89 507 aa23.53■■□□□ 1.36
ARRDC1-209ENST00000483563 HOXB7P09629 217 aa23.53■■□□□ 1.36
ARRDC1-209ENST00000483563 LBX1P52954 281 aa23.53■■□□□ 1.36
ARRDC1-209ENST00000483563 MAP2K1Q02750 393 aaPredicted RBP23.53■■□□□ 1.36
ARRDC1-209ENST00000483563 CRY2Q49AN0 593 aa23.53■■□□□ 1.36
ARRDC1-209ENST00000483563 SUSD4Q5VX71 490 aa23.53■■□□□ 1.36
ARRDC1-209ENST00000483563 NTSR2O95665 410 aa23.52■■□□□ 1.36
ARRDC1-209ENST00000483563 IARSP41252 1262 aaKnown RBP23.52■■□□□ 1.36
ARRDC1-209ENST00000483563 KRT24Q2M2I5 525 aa23.52■■□□□ 1.36
ARRDC1-209ENST00000483563 CNTROBQ8N137 903 aa23.52■■□□□ 1.36
ARRDC1-209ENST00000483563 CFAP44Q96MT7 982 aa23.52■■□□□ 1.36
ARRDC1-209ENST00000483563 DDX21Q9NR30 783 aaKnown RBP eCLIP23.52■■□□□ 1.36
ARRDC1-209ENST00000483563 RNF123Q5XPI4 1314 aa23.52■■□□□ 1.36
ARRDC1-209ENST00000483563 HSP90AB3PQ58FF7 597 aa23.51■■□□□ 1.35
ARRDC1-209ENST00000483563 GPC2Q8N158 579 aa23.51■■□□□ 1.35
ARRDC1-209ENST00000483563 JDP2Q8WYK2 163 aa23.51■■□□□ 1.35
ARRDC1-209ENST00000483563 RPGRQ92834 1020 aaKnown RBP23.51■■□□□ 1.35
ARRDC1-209ENST00000483563 FZD9O00144 591 aa23.5■■□□□ 1.35
ARRDC1-209ENST00000483563 APAF1O14727 1248 aa23.5■■□□□ 1.35
ARRDC1-209ENST00000483563 CALD1Q05682 793 aaKnown RBP23.5■■□□□ 1.35
ARRDC1-209ENST00000483563 HDGFL1Q5TGJ6 251 aa23.5■■□□□ 1.35
ARRDC1-209ENST00000483563 COPS6Q7L5N1 327 aa23.5■■□□□ 1.35
ARRDC1-209ENST00000483563 XAGE3Q8WTP9 111 aa23.5■■□□□ 1.35
ARRDC1-209ENST00000483563 ABT1Q9ULW3 272 aaKnown RBP23.5■■□□□ 1.35
ARRDC1-209ENST00000483563 AIMP1Q12904 312 aaKnown RBP23.49■■□□□ 1.35
ARRDC1-209ENST00000483563 SYNE4Q8N205 404 aa23.49■■□□□ 1.35
ARRDC1-209ENST00000483563 HSPA8P11142 646 aaKnown RBP23.48■■□□□ 1.35
ARRDC1-209ENST00000483563 LMOD1P29536 600 aaPredicted RBP23.48■■□□□ 1.35
ARRDC1-209ENST00000483563 MAP1SQ66K74 1059 aaPredicted RBP23.48■■□□□ 1.35
ARRDC1-209ENST00000483563 UTP14AQ9BVJ6 771 aaKnown RBP23.48■■□□□ 1.35
ARRDC1-209ENST00000483563 CHPF2Q9P2E5 772 aa23.48■■□□□ 1.35
ARRDC1-209ENST00000483563 WDR33Q9C0J8 1336 aaKnown RBP23.48■■□□□ 1.35
ARRDC1-209ENST00000483563 EIF6P56537 245 aaKnown RBP23.47■■□□□ 1.35
ARRDC1-209ENST00000483563 PSMD1Q99460 953 aa23.47■■□□□ 1.35
ARRDC1-209ENST00000483563 MBIPQ9NS73 344 aa23.47■■□□□ 1.35
ARRDC1-209ENST00000483563 HOXA10P31260 410 aaPredicted RBP23.46■■□□□ 1.35
ARRDC1-209ENST00000483563 CC2D2BQ6DHV5 1058 aa23.46■■□□□ 1.35
ARRDC1-209ENST00000483563 OLFM4Q6UX06 510 aa23.46■■□□□ 1.35
ARRDC1-209ENST00000483563 DDX60Q8IY21 1712 aaKnown RBP23.46■■□□□ 1.35
ARRDC1-209ENST00000483563 ABHD8Q96I13 439 aa23.46■■□□□ 1.35
ARRDC1-209ENST00000483563 RBM17Q96I25 401 aaKnown RBP23.46■■□□□ 1.35
ARRDC1-209ENST00000483563 BEGAINQ9BUH8 593 aa23.46■■□□□ 1.35
ARRDC1-209ENST00000483563 IFT57Q9NWB7 429 aa23.46■■□□□ 1.35
ARRDC1-209ENST00000483563 DBF4Q9UBU7 674 aaPredicted RBP23.46■■□□□ 1.35
ARRDC1-209ENST00000483563 SNED1Q8TER0 1413 aa23.45■■□□□ 1.34
ARRDC1-209ENST00000483563 ZNF853P0CG23 659 aa23.45■■□□□ 1.34
ARRDC1-209ENST00000483563 GNAI1P63096 354 aa23.45■■□□□ 1.34
ARRDC1-209ENST00000483563 DUSP27Q5VZP5 1158 aa23.45■■□□□ 1.34
ARRDC1-209ENST00000483563 NLRP3Q96P20 1036 aa23.45■■□□□ 1.34
ARRDC1-209ENST00000483563 THSD7BQ9C0I4 1608 aa23.44■■□□□ 1.34
ARRDC1-209ENST00000483563 ECE1P42892 770 aa23.44■■□□□ 1.34
ARRDC1-209ENST00000483563 TCIRG1Q13488 830 aa23.44■■□□□ 1.34
ARRDC1-209ENST00000483563 GRIPAP1Q4V328 841 aa23.44■■□□□ 1.34
ARRDC1-209ENST00000483563 CRAMP1Q96RY5 1269 aa23.44■■□□□ 1.34
ARRDC1-209ENST00000483563 TRPM7Q96QT4 1865 aa23.44■■□□□ 1.34
ARRDC1-209ENST00000483563 NLRP10Q86W26 655 aa23.43■■□□□ 1.34
ARRDC1-209ENST00000483563 GJA3Q9Y6H8 435 aa23.43■■□□□ 1.34
ARRDC1-209ENST00000483563 PPEF1O14829 653 aaPredicted RBP23.42■■□□□ 1.34
ARRDC1-209ENST00000483563 SLC10A5Q5PT55 438 aa23.42■■□□□ 1.34
ARRDC1-209ENST00000483563 PAXIP1Q6ZW49 1069 aaPredicted RBP23.42■■□□□ 1.34
ARRDC1-209ENST00000483563 PLBD2Q8NHP8 589 aa23.42■■□□□ 1.34
ARRDC1-209ENST00000483563 HYPKQ9NX55 129 aa23.42■■□□□ 1.34
ARRDC1-209ENST00000483563 TAF1P21675 1872 aa23.42■■□□□ 1.34
ARRDC1-209ENST00000483563 C3orf67Q6ZVT6 689 aa23.41■■□□□ 1.34
ARRDC1-209ENST00000483563 SH3TC1Q8TE82 1336 aa23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms