RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 KAT6BQ8WYB5 2073 aa8.12□□□□□ -1.11
CSDE1-207ENST00000483407 SMAPO00193 183 aa8.11□□□□□ -1.11
CSDE1-207ENST00000483407 PPM1GO15355 546 aaPredicted RBP8.11□□□□□ -1.11
CSDE1-207ENST00000483407 RGS20O76081 388 aa8.11□□□□□ -1.11
CSDE1-207ENST00000483407 TMEM259Q4ZIN3 620 aa8.11□□□□□ -1.11
CSDE1-207ENST00000483407 RSBN1LQ6PCB5 846 aaPredicted RBP8.11□□□□□ -1.11
CSDE1-207ENST00000483407 NUTM1Q86Y26 1132 aa8.11□□□□□ -1.11
CSDE1-207ENST00000483407 SPG7Q9UQ90 795 aa8.11□□□□□ -1.11
CSDE1-207ENST00000483407 CD2APQ9Y5K6 639 aa8.11□□□□□ -1.11
CSDE1-207ENST00000483407 DOT1LQ8TEK3 1739 aa8.11□□□□□ -1.11
CSDE1-207ENST00000483407 QSER1Q2KHR3 1735 aa8.1□□□□□ -1.11
CSDE1-207ENST00000483407 APBB1O00213 710 aa8.1□□□□□ -1.11
CSDE1-207ENST00000483407 CYP27B1O15528 508 aa8.1□□□□□ -1.11
CSDE1-207ENST00000483407 YBX3P16989 372 aaKnown RBP eCLIP8.1□□□□□ -1.111e-11■□□□□ 9.7
CSDE1-207ENST00000483407 KIAA1468Q9P260 1216 aa8.1□□□□□ -1.11
CSDE1-207ENST00000483407 EMILIN1Q9Y6C2 1016 aa8.1□□□□□ -1.11
CSDE1-207ENST00000483407 NSD3Q9BZ95 1437 aa8.1□□□□□ -1.11
CSDE1-207ENST00000483407 MOXD2PA6NHM9 499 aa8.09□□□□□ -1.11
CSDE1-207ENST00000483407 CARD14Q9BXL6 1004 aa8.09□□□□□ -1.11
CSDE1-207ENST00000483407 SLC4A5Q9BY07 1137 aa8.09□□□□□ -1.11
CSDE1-207ENST00000483407 LY75O60449 1722 aa8.09□□□□□ -1.11
CSDE1-207ENST00000483407 WASHC2AQ641Q2 1341 aa8.08□□□□□ -1.12
CSDE1-207ENST00000483407 LOC102724428A0A0B4J2F2 783 aa8.08□□□□□ -1.12
CSDE1-207ENST00000483407 ARHGAP33O14559 1287 aa8.08□□□□□ -1.12
CSDE1-207ENST00000483407 SSFA2P28290 1259 aa8.08□□□□□ -1.12
CSDE1-207ENST00000483407 PBX2P40425 430 aa8.08□□□□□ -1.12
CSDE1-207ENST00000483407 PSEN2P49810 448 aa8.08□□□□□ -1.12
CSDE1-207ENST00000483407 SIK1P57059 783 aa8.08□□□□□ -1.12
CSDE1-207ENST00000483407 TRIM26Q12899 539 aaPredicted RBP8.08□□□□□ -1.12
CSDE1-207ENST00000483407 PIGBQ92521 554 aa8.08□□□□□ -1.12
CSDE1-207ENST00000483407 TMOD3Q9NYL9 352 aa8.08□□□□□ -1.12
CSDE1-207ENST00000483407 RABGEF1Q9UJ41 708 aa8.08□□□□□ -1.12
CSDE1-207ENST00000483407 CHD4Q14839 1912 aa8.07□□□□□ -1.12
CSDE1-207ENST00000483407 SHANK3Q9BYB0 1731 aa8.07□□□□□ -1.12
CSDE1-207ENST00000483407 LILRB3O75022 631 aa8.07□□□□□ -1.12
CSDE1-207ENST00000483407 KDM4AO75164 1064 aa8.07□□□□□ -1.12
CSDE1-207ENST00000483407 GCGRP47871 477 aa8.07□□□□□ -1.12
CSDE1-207ENST00000483407 IFNL2Q8IZJ0 200 aa8.07□□□□□ -1.12
CSDE1-207ENST00000483407 RDH13Q8NBN7 331 aa8.07□□□□□ -1.12
CSDE1-207ENST00000483407 POM121Q96HA1 1249 aa8.07□□□□□ -1.12
CSDE1-207ENST00000483407 SNRKQ9NRH2 765 aa8.07□□□□□ -1.12
CSDE1-207ENST00000483407 GOLGB1Q14789 3259 aaKnown RBP8.07□□□□□ -1.12
CSDE1-207ENST00000483407 COL24A1Q17RW2 1714 aa8.06□□□□□ -1.12
CSDE1-207ENST00000483407 NCAPD2Q15021 1401 aa8.06□□□□□ -1.12
CSDE1-207ENST00000483407 ATP10DQ9P241 1426 aa8.06□□□□□ -1.12
CSDE1-207ENST00000483407 RAD21O60216 631 aa8.06□□□□□ -1.12
CSDE1-207ENST00000483407 PHKG2P15735 406 aa8.06□□□□□ -1.12
CSDE1-207ENST00000483407 NDUFV2P19404 249 aa8.06□□□□□ -1.12
CSDE1-207ENST00000483407 ATP6V1AP38606 617 aa8.06□□□□□ -1.12
CSDE1-207ENST00000483407 POTEEQ6S8J3 1075 aa8.06□□□□□ -1.12
CSDE1-207ENST00000483407 POLR3GLQ9BT43 218 aa8.06□□□□□ -1.12
CSDE1-207ENST00000483407 POLKQ9UBT6 870 aa8.06□□□□□ -1.12
CSDE1-207ENST00000483407 IGSF1Q8N6C5 1336 aa8.05□□□□□ -1.12
CSDE1-207ENST00000483407 RGPD2P0DJD1 1756 aa8.05□□□□□ -1.12
CSDE1-207ENST00000483407 HSP90AB1P08238 724 aaKnown RBP8.05□□□□□ -1.12
CSDE1-207ENST00000483407 USP46P62068 366 aa8.05□□□□□ -1.12
CSDE1-207ENST00000483407 QPCTQ16769 361 aa8.05□□□□□ -1.12
CSDE1-207ENST00000483407 PRPF38BQ5VTL8 546 aaKnown RBP8.05□□□□□ -1.12
CSDE1-207ENST00000483407 AMIGO3Q86WK7 504 aa8.05□□□□□ -1.12
CSDE1-207ENST00000483407 LINC00116Q8NCU8 138 aa8.05□□□□□ -1.12
CSDE1-207ENST00000483407 ASAP1Q9ULH1 1129 aa8.05□□□□□ -1.12
CSDE1-207ENST00000483407 COG6Q9Y2V7 657 aa8.05□□□□□ -1.12
CSDE1-207ENST00000483407 PCDHB15Q9Y5E8 787 aa8.05□□□□□ -1.12
CSDE1-207ENST00000483407 PLEKHG2Q9H7P9 1386 aa8.05□□□□□ -1.12
CSDE1-207ENST00000483407 TUBGCP6Q96RT7 1819 aa8.05□□□□□ -1.12
CSDE1-207ENST00000483407 SLC10A3P09131 477 aa8.04□□□□□ -1.12
CSDE1-207ENST00000483407 TNNT2P45379 298 aaPredicted RBP8.04□□□□□ -1.12
CSDE1-207ENST00000483407 EIF4A2Q14240 407 aaKnown RBP8.04□□□□□ -1.12
CSDE1-207ENST00000483407 SWT1Q5T5J6 900 aaKnown RBP8.04□□□□□ -1.12
CSDE1-207ENST00000483407 SMIM5Q71RC9 77 aa8.04□□□□□ -1.12
CSDE1-207ENST00000483407 ZNF526Q8TF50 670 aaPredicted RBP8.04□□□□□ -1.12
CSDE1-207ENST00000483407 ATG3Q9NT62 314 aa8.04□□□□□ -1.12
CSDE1-207ENST00000483407 WWC3Q9ULE0 1092 aa8.04□□□□□ -1.12
CSDE1-207ENST00000483407 RTCBQ9Y3I0 505 aaKnown RBP8.04□□□□□ -1.12
CSDE1-207ENST00000483407 C5P01031 1676 aa8.04□□□□□ -1.12
CSDE1-207ENST00000483407 C4BP0C0L5 1744 aa8.03□□□□□ -1.12
CSDE1-207ENST00000483407 ERVV-2B6SEH9 535 aa8.03□□□□□ -1.12
CSDE1-207ENST00000483407 HOXA2O43364 376 aa8.03□□□□□ -1.12
CSDE1-207ENST00000483407 MMP10P09238 476 aa8.03□□□□□ -1.12
CSDE1-207ENST00000483407 ITPK1Q13572 414 aa8.03□□□□□ -1.12
CSDE1-207ENST00000483407 CSPP1Q1MSJ5 1256 aa8.03□□□□□ -1.12
CSDE1-207ENST00000483407 PLEKHO1Q53GL0 409 aaPredicted RBP8.03□□□□□ -1.12
CSDE1-207ENST00000483407 TRAPPC3LQ5T215 181 aa8.03□□□□□ -1.12
CSDE1-207ENST00000483407 NLGN1Q8N2Q7 840 aa8.03□□□□□ -1.12
CSDE1-207ENST00000483407 MTMR14Q8NCE2 650 aa8.03□□□□□ -1.12
CSDE1-207ENST00000483407 ARID3AQ99856 593 aa8.03□□□□□ -1.12
CSDE1-207ENST00000483407 KIF20BQ96Q89 1820 aa8.03□□□□□ -1.12
CSDE1-207ENST00000483407 CLSPNQ9HAW4 1339 aa8.03□□□□□ -1.12
CSDE1-207ENST00000483407 ADCY9O60503 1353 aa8.02□□□□□ -1.13
CSDE1-207ENST00000483407 AMOTQ4VCS5 1084 aa8.02□□□□□ -1.13
CSDE1-207ENST00000483407 RTL5Q5HYW3 569 aaPredicted RBP8.02□□□□□ -1.13
CSDE1-207ENST00000483407 DMRTA1Q5VZB9 504 aa8.02□□□□□ -1.13
CSDE1-207ENST00000483407 DCAF5Q96JK2 942 aa8.02□□□□□ -1.13
CSDE1-207ENST00000483407 IRX2Q9BZI1 471 aaPredicted RBP8.02□□□□□ -1.13
CSDE1-207ENST00000483407 PKD1L3Q7Z443 1732 aa8.02□□□□□ -1.13
CSDE1-207ENST00000483407 HSPA6P17066 643 aa8.01□□□□□ -1.13
CSDE1-207ENST00000483407 RFC4P35249 363 aa8.01□□□□□ -1.13
CSDE1-207ENST00000483407 CABP4P57796 275 aa8.01□□□□□ -1.13
CSDE1-207ENST00000483407 TGFB2P61812 414 aa8.01□□□□□ -1.13
CSDE1-207ENST00000483407 C1orf141Q5JVX7 400 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms