RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 GJA3Q9Y6H8 435 aa9.83□□□□□ -0.84
CSDE1-206ENST00000483030 RASSF10A6NK89 507 aa9.82□□□□□ -0.84
CSDE1-206ENST00000483030 EIF6P56537 245 aaKnown RBP9.82□□□□□ -0.84
CSDE1-206ENST00000483030 CC2D2BQ6DHV5 1058 aa9.82□□□□□ -0.84
CSDE1-206ENST00000483030 PSMD1Q99460 953 aa9.82□□□□□ -0.84
CSDE1-206ENST00000483030 NYXQ9GZU5 481 aa9.82□□□□□ -0.84
CSDE1-206ENST00000483030 ABT1Q9ULW3 272 aaKnown RBP9.82□□□□□ -0.84
CSDE1-206ENST00000483030 ERVV-1B6SEH8 477 aa9.81□□□□□ -0.84
CSDE1-206ENST00000483030 TCERG1O14776 1098 aaKnown RBP9.81□□□□□ -0.84
CSDE1-206ENST00000483030 GPTP24298 496 aa9.81□□□□□ -0.84
CSDE1-206ENST00000483030 FMR1Q06787 632 aaKnown RBP eCLIP9.81□□□□□ -0.84
CSDE1-206ENST00000483030 CRY2Q49AN0 593 aa9.81□□□□□ -0.84
CSDE1-206ENST00000483030 TTLL7Q6ZT98 887 aa9.81□□□□□ -0.84
CSDE1-206ENST00000483030 RPGRQ92834 1020 aaKnown RBP9.81□□□□□ -0.84
CSDE1-206ENST00000483030 VIRMAQ69YN4 1812 aaKnown RBP9.81□□□□□ -0.84
CSDE1-206ENST00000483030 MAP3K15Q6ZN16 1313 aa9.81□□□□□ -0.84
CSDE1-206ENST00000483030 WDR33Q9C0J8 1336 aaKnown RBP9.81□□□□□ -0.84
CSDE1-206ENST00000483030 SIPA1L3O60292 1781 aaPredicted RBP9.8□□□□□ -0.84
CSDE1-206ENST00000483030 DICER1Q9UPY3 1922 aaKnown RBP9.8□□□□□ -0.84
CSDE1-206ENST00000483030 ABCC12Q96J65 1359 aa9.8□□□□□ -0.84
CSDE1-206ENST00000483030 HSPA8P11142 646 aaKnown RBP9.8□□□□□ -0.84
CSDE1-206ENST00000483030 MYL6BP14649 208 aa9.8□□□□□ -0.84
CSDE1-206ENST00000483030 LMOD1P29536 600 aaPredicted RBP9.8□□□□□ -0.84
CSDE1-206ENST00000483030 HOXA10P31260 410 aaPredicted RBP9.8□□□□□ -0.84
CSDE1-206ENST00000483030 EPS15P42566 896 aa9.8□□□□□ -0.84
CSDE1-206ENST00000483030 SUSD4Q5VX71 490 aa9.8□□□□□ -0.84
CSDE1-206ENST00000483030 KIF6Q6ZMV9 814 aa9.8□□□□□ -0.84
CSDE1-206ENST00000483030 SLC51AQ86UW1 340 aa9.8□□□□□ -0.84
CSDE1-206ENST00000483030 LARGE2Q8N3Y3 721 aa9.8□□□□□ -0.84
CSDE1-206ENST00000483030 ZBTB3Q9H5J0 574 aa9.8□□□□□ -0.84
CSDE1-206ENST00000483030 DDX21Q9NR30 783 aaKnown RBP eCLIP9.8□□□□□ -0.84
CSDE1-206ENST00000483030 SCNN1DP51172 638 aa9.79□□□□□ -0.84
CSDE1-206ENST00000483030 EIF4A1P60842 406 aaKnown RBP9.79□□□□□ -0.84
CSDE1-206ENST00000483030 MAP2K1Q02750 393 aaPredicted RBP9.79□□□□□ -0.84
CSDE1-206ENST00000483030 GRIPAP1Q4V328 841 aa9.79□□□□□ -0.84
CSDE1-206ENST00000483030 PNISRQ8TF01 805 aaKnown RBP9.79□□□□□ -0.84
CSDE1-206ENST00000483030 RBM17Q96I25 401 aaKnown RBP9.79□□□□□ -0.84
CSDE1-206ENST00000483030 CRAMP1Q96RY5 1269 aa9.79□□□□□ -0.84
CSDE1-206ENST00000483030 THUMPD2Q9BTF0 503 aaKnown RBP9.79□□□□□ -0.84
CSDE1-206ENST00000483030 UBN2Q6ZU65 1347 aa9.79□□□□□ -0.84
CSDE1-206ENST00000483030 TRAF5O00463 557 aa9.78□□□□□ -0.84
CSDE1-206ENST00000483030 PPEF1O14829 653 aaPredicted RBP9.78□□□□□ -0.84
CSDE1-206ENST00000483030 NEFMP07197 916 aa9.78□□□□□ -0.84
CSDE1-206ENST00000483030 GRM1Q13255 1194 aa9.78□□□□□ -0.84
CSDE1-206ENST00000483030 CST9Q5W186 159 aa9.78□□□□□ -0.84
CSDE1-206ENST00000483030 C3orf67Q6ZVT6 689 aa9.78□□□□□ -0.84
CSDE1-206ENST00000483030 PAXIP1Q6ZW49 1069 aaPredicted RBP9.78□□□□□ -0.84
CSDE1-206ENST00000483030 NIM1KQ8IY84 436 aa9.78□□□□□ -0.84
CSDE1-206ENST00000483030 ZNF34Q8IZ26 560 aa9.78□□□□□ -0.84
CSDE1-206ENST00000483030 ABHD8Q96I13 439 aa9.78□□□□□ -0.84
CSDE1-206ENST00000483030 CAPNS2Q96L46 248 aa9.78□□□□□ -0.84
CSDE1-206ENST00000483030 GPR101Q96P66 508 aaPredicted RBP9.78□□□□□ -0.84
CSDE1-206ENST00000483030 SNED1Q8TER0 1413 aa9.78□□□□□ -0.84
CSDE1-206ENST00000483030 BCORQ6W2J9 1755 aa9.78□□□□□ -0.84
CSDE1-206ENST00000483030 SCN4AP35499 1836 aa9.77□□□□□ -0.84
CSDE1-206ENST00000483030 PPIP5K2O43314 1243 aa9.77□□□□□ -0.85
CSDE1-206ENST00000483030 ATXN8OSP0DMR3 200 aa9.77□□□□□ -0.85
CSDE1-206ENST00000483030 CYP4F22Q6NT55 531 aa9.77□□□□□ -0.85
CSDE1-206ENST00000483030 USP50Q70EL3 339 aaPredicted RBP9.77□□□□□ -0.85
CSDE1-206ENST00000483030 NLRP3Q96P20 1036 aa9.77□□□□□ -0.85
CSDE1-206ENST00000483030 BEGAINQ9BUH8 593 aa9.77□□□□□ -0.85
CSDE1-206ENST00000483030 NTSR2O95665 410 aa9.76□□□□□ -0.85
CSDE1-206ENST00000483030 ECE1P42892 770 aa9.76□□□□□ -0.85
CSDE1-206ENST00000483030 CXCL9Q07325 125 aa9.76□□□□□ -0.85
CSDE1-206ENST00000483030 AOC3Q16853 763 aa9.76□□□□□ -0.85
CSDE1-206ENST00000483030 GIGYF2Q6Y7W6 1299 aaKnown RBP9.76□□□□□ -0.85
CSDE1-206ENST00000483030 PPP1R42Q7Z4L9 355 aa9.76□□□□□ -0.85
CSDE1-206ENST00000483030 TMX4Q9H1E5 349 aaPredicted RBP9.76□□□□□ -0.85
CSDE1-206ENST00000483030 ATP6V0A2Q9Y487 856 aa9.76□□□□□ -0.85
CSDE1-206ENST00000483030 COL4A5P29400 1685 aa9.76□□□□□ -0.85
CSDE1-206ENST00000483030 ARFGEF2Q9Y6D5 1785 aa9.75□□□□□ -0.85
CSDE1-206ENST00000483030 CACNA1SQ13698 1873 aa9.75□□□□□ -0.85
CSDE1-206ENST00000483030 EIF2S2P20042 333 aaKnown RBP9.75□□□□□ -0.85
CSDE1-206ENST00000483030 NFE2L2Q16236 605 aa9.75□□□□□ -0.85
CSDE1-206ENST00000483030 SLC10A5Q5PT55 438 aa9.75□□□□□ -0.85
CSDE1-206ENST00000483030 PLEKHF1Q96S99 279 aa9.75□□□□□ -0.85
CSDE1-206ENST00000483030 UTP14AQ9BVJ6 771 aaKnown RBP9.75□□□□□ -0.85
CSDE1-206ENST00000483030 ADARB2Q9NS39 739 aaKnown RBP9.75□□□□□ -0.85
CSDE1-206ENST00000483030 GPRC5DQ9NZD1 345 aa9.75□□□□□ -0.85
CSDE1-206ENST00000483030 TSKSQ9UJT2 592 aa9.75□□□□□ -0.85
CSDE1-206ENST00000483030 ADAMTSL1Q8N6G6 1762 aa9.75□□□□□ -0.85
CSDE1-206ENST00000483030 IBTKQ9P2D0 1353 aaPredicted RBP9.75□□□□□ -0.85
CSDE1-206ENST00000483030 CCDC85CA6NKD9 419 aa9.74□□□□□ -0.85
CSDE1-206ENST00000483030 AOC2O75106 756 aa9.74□□□□□ -0.85
CSDE1-206ENST00000483030 GMPSP49915 693 aaPredicted RBP9.74□□□□□ -0.85
CSDE1-206ENST00000483030 FAM161AQ3B820 660 aa9.74□□□□□ -0.85
CSDE1-206ENST00000483030 PARP10Q53GL7 1025 aa9.74□□□□□ -0.85
CSDE1-206ENST00000483030 VPS33BQ9H267 617 aa9.74□□□□□ -0.85
CSDE1-206ENST00000483030 ZNRF3Q9ULT6 936 aa9.74□□□□□ -0.85
CSDE1-206ENST00000483030 TLL2Q9Y6L7 1015 aa9.74□□□□□ -0.85
CSDE1-206ENST00000483030 BBOX1O75936 387 aa9.73□□□□□ -0.85
CSDE1-206ENST00000483030 RAD17O75943 681 aa9.73□□□□□ -0.85
CSDE1-206ENST00000483030 CELF2O95319 508 aaKnown RBP9.73□□□□□ -0.85
CSDE1-206ENST00000483030 ANXA1P04083 346 aa9.73□□□□□ -0.85
CSDE1-206ENST00000483030 HCLS1P14317 486 aaPredicted RBP9.73□□□□□ -0.85
CSDE1-206ENST00000483030 MAP2K2P36507 400 aa9.73□□□□□ -0.85
CSDE1-206ENST00000483030 PDIA6Q15084 440 aa9.73□□□□□ -0.85
CSDE1-206ENST00000483030 PROSER3Q2NL68 480 aa9.73□□□□□ -0.85
CSDE1-206ENST00000483030 DPP8Q6V1X1 898 aaPredicted RBP9.73□□□□□ -0.85
CSDE1-206ENST00000483030 LRP10Q7Z4F1 713 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms