RNA–Protein interactions for RNA: ENST00000482654.1

PLXNB3-207, Transcript of plexin B3, humanhuman

TSL 5

Gene PLXNB3, Length 717 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNB3-207ENST00000482654 LTBP1Q14766 1721 aa26.3■■□□□ 1.8
PLXNB3-207ENST00000482654 RPGRQ92834 1020 aaKnown RBP26.29■■□□□ 1.8
PLXNB3-207ENST00000482654 PSMD1Q99460 953 aa26.29■■□□□ 1.8
PLXNB3-207ENST00000482654 CLEC11AQ9Y240 323 aa26.29■■□□□ 1.8
PLXNB3-207ENST00000482654 MAPK8IP3Q9UPT6 1336 aa26.29■■□□□ 1.8
PLXNB3-207ENST00000482654 ITGBL1O95965 494 aaPredicted RBP26.28■■□□□ 1.8
PLXNB3-207ENST00000482654 SUSD4Q5VX71 490 aa26.28■■□□□ 1.8
PLXNB3-207ENST00000482654 C3orf67Q6ZVT6 689 aa26.28■■□□□ 1.8
PLXNB3-207ENST00000482654 NTSR2O95665 410 aa26.26■■□□□ 1.79
PLXNB3-207ENST00000482654 MAP1SQ66K74 1059 aaPredicted RBP26.26■■□□□ 1.79
PLXNB3-207ENST00000482654 GPC2Q8N158 579 aa26.26■■□□□ 1.79
PLXNB3-207ENST00000482654 TMEM88BA6NKF7 163 aa26.25■■□□□ 1.79
PLXNB3-207ENST00000482654 TCERG1O14776 1098 aaKnown RBP26.25■■□□□ 1.79
PLXNB3-207ENST00000482654 HOXA10P31260 410 aaPredicted RBP26.25■■□□□ 1.79
PLXNB3-207ENST00000482654 ZNF34Q8IZ26 560 aa26.25■■□□□ 1.79
PLXNB3-207ENST00000482654 JDP2Q8WYK2 163 aa26.25■■□□□ 1.79
PLXNB3-207ENST00000482654 GJA3Q9Y6H8 435 aa26.25■■□□□ 1.79
PLXNB3-207ENST00000482654 FOXN1O15353 648 aa26.24■■□□□ 1.79
PLXNB3-207ENST00000482654 TSPYL4Q9UJ04 414 aa26.24■■□□□ 1.79
PLXNB3-207ENST00000482654 ERBB4Q15303 1308 aa26.23■■□□□ 1.79
PLXNB3-207ENST00000482654 PPEF1O14829 653 aaPredicted RBP26.23■■□□□ 1.79
PLXNB3-207ENST00000482654 VEGFBP49765 207 aa26.23■■□□□ 1.79
PLXNB3-207ENST00000482654 GIGYF2Q6Y7W6 1299 aaKnown RBP26.23■■□□□ 1.79
PLXNB3-207ENST00000482654 ANKRD36CQ5JPF3 1778 aa26.23■■□□□ 1.79
PLXNB3-207ENST00000482654 ANXA1P04083 346 aa26.22■■□□□ 1.79
PLXNB3-207ENST00000482654 PROSER3Q2NL68 480 aa26.22■■□□□ 1.79
PLXNB3-207ENST00000482654 CC2D2BQ6DHV5 1058 aa26.22■■□□□ 1.79
PLXNB3-207ENST00000482654 LRP10Q7Z4F1 713 aa26.22■■□□□ 1.79
PLXNB3-207ENST00000482654 PNMA8AQ86V59 439 aaPredicted RBP26.22■■□□□ 1.79
PLXNB3-207ENST00000482654 EIF6P56537 245 aaKnown RBP26.21■■□□□ 1.79
PLXNB3-207ENST00000482654 CNTROBQ8N137 903 aa26.21■■□□□ 1.79
PLXNB3-207ENST00000482654 LARGE2Q8N3Y3 721 aa26.21■■□□□ 1.79
PLXNB3-207ENST00000482654 LAMB2P55268 1798 aa26.2■■□□□ 1.79
PLXNB3-207ENST00000482654 EIF2S2P20042 333 aaKnown RBP26.2■■□□□ 1.78
PLXNB3-207ENST00000482654 RBM17Q96I25 401 aaKnown RBP26.2■■□□□ 1.78
PLXNB3-207ENST00000482654 CRAMP1Q96RY5 1269 aa26.2■■□□□ 1.78
PLXNB3-207ENST00000482654 SCNN1DP51172 638 aa26.19■■□□□ 1.78
PLXNB3-207ENST00000482654 PDIA6Q15084 440 aa26.19■■□□□ 1.78
PLXNB3-207ENST00000482654 LMOD1P29536 600 aaPredicted RBP26.17■■□□□ 1.78
PLXNB3-207ENST00000482654 PARP10Q53GL7 1025 aa26.17■■□□□ 1.78
PLXNB3-207ENST00000482654 PPP1R42Q7Z4L9 355 aa26.17■■□□□ 1.78
PLXNB3-207ENST00000482654 PNNQ9H307 717 aaKnown RBP26.17■■□□□ 1.78
PLXNB3-207ENST00000482654 ABCC4O15439 1325 aa26.16■■□□□ 1.78
PLXNB3-207ENST00000482654 EPS15P42566 896 aa26.16■■□□□ 1.78
PLXNB3-207ENST00000482654 RIPK4P57078 832 aa26.16■■□□□ 1.78
PLXNB3-207ENST00000482654 FMR1Q06787 632 aaKnown RBP eCLIP26.16■■□□□ 1.78
PLXNB3-207ENST00000482654 NECTIN2Q92692 538 aa26.16■■□□□ 1.78
PLXNB3-207ENST00000482654 RASSF10A6NK89 507 aa26.15■■□□□ 1.78
PLXNB3-207ENST00000482654 PPIP5K2O43314 1243 aa26.15■■□□□ 1.78
PLXNB3-207ENST00000482654 AOC3Q16853 763 aa26.15■■□□□ 1.78
PLXNB3-207ENST00000482654 NIM1KQ8IY84 436 aa26.15■■□□□ 1.78
PLXNB3-207ENST00000482654 AIDAQ96BJ3 306 aa26.15■■□□□ 1.78
PLXNB3-207ENST00000482654 UTP14AQ9BVJ6 771 aaKnown RBP26.15■■□□□ 1.78
PLXNB3-207ENST00000482654 NLRP3Q96P20 1036 aa26.14■■□□□ 1.78
PLXNB3-207ENST00000482654 ABT1Q9ULW3 272 aaKnown RBP26.14■■□□□ 1.78
PLXNB3-207ENST00000482654 THSD7BQ9C0I4 1608 aa26.14■■□□□ 1.77
PLXNB3-207ENST00000482654 GRIPAP1Q4V328 841 aa26.13■■□□□ 1.77
PLXNB3-207ENST00000482654 DDX21Q9NR30 783 aaKnown RBP eCLIP26.13■■□□□ 1.77
PLXNB3-207ENST00000482654 ATP6V0A2Q9Y487 856 aa26.12■■□□□ 1.77
PLXNB3-207ENST00000482654 TMPOP42166 694 aaKnown RBP26.11■■□□□ 1.77
PLXNB3-207ENST00000482654 CTCFP49711 727 aaPredicted RBP26.11■■□□□ 1.77
PLXNB3-207ENST00000482654 AIMP1Q12904 312 aaKnown RBP26.11■■□□□ 1.77
PLXNB3-207ENST00000482654 KRT24Q2M2I5 525 aa26.11■■□□□ 1.77
PLXNB3-207ENST00000482654 DEFB115Q30KQ5 88 aa26.11■■□□□ 1.77
PLXNB3-207ENST00000482654 XAGE3Q8WTP9 111 aa26.11■■□□□ 1.77
PLXNB3-207ENST00000482654 PRDM10Q9NQV6 1147 aa26.11■■□□□ 1.77
PLXNB3-207ENST00000482654 WBP1LQ9NX94 342 aa26.11■■□□□ 1.77
PLXNB3-207ENST00000482654 HCLS1P14317 486 aaPredicted RBP26.1■■□□□ 1.77
PLXNB3-207ENST00000482654 COPS6Q7L5N1 327 aa26.1■■□□□ 1.77
PLXNB3-207ENST00000482654 ZNF428Q96B54 188 aa26.1■■□□□ 1.77
PLXNB3-207ENST00000482654 TRAF5O00463 557 aa26.09■■□□□ 1.77
PLXNB3-207ENST00000482654 SLC10A5Q5PT55 438 aa26.09■■□□□ 1.77
PLXNB3-207ENST00000482654 NLRP10Q86W26 655 aa26.09■■□□□ 1.77
PLXNB3-207ENST00000482654 CCDC146Q8IYE0 955 aa26.09■■□□□ 1.77
PLXNB3-207ENST00000482654 WDR33Q9C0J8 1336 aaKnown RBP26.09■■□□□ 1.77
PLXNB3-207ENST00000482654 TAF1P21675 1872 aa26.08■■□□□ 1.77
PLXNB3-207ENST00000482654 TRPM7Q96QT4 1865 aa26.08■■□□□ 1.77
PLXNB3-207ENST00000482654 DUOX1Q9NRD9 1551 aa26.08■■□□□ 1.77
PLXNB3-207ENST00000482654 LBX1P52954 281 aa26.08■■□□□ 1.77
PLXNB3-207ENST00000482654 LMOD3Q0VAK6 560 aa26.08■■□□□ 1.77
PLXNB3-207ENST00000482654 TMX4Q9H1E5 349 aaPredicted RBP26.08■■□□□ 1.77
PLXNB3-207ENST00000482654 USP50Q70EL3 339 aaPredicted RBP26.07■■□□□ 1.76
PLXNB3-207ENST00000482654 BABAM1Q9NWV8 329 aa26.07■■□□□ 1.76
PLXNB3-207ENST00000482654 DDX60Q8IY21 1712 aaKnown RBP26.07■■□□□ 1.76
PLXNB3-207ENST00000482654 LRRC37AA6NMS7 1700 aa26.06■■□□□ 1.76
PLXNB3-207ENST00000482654 NEUROD2Q15784 382 aa26.06■■□□□ 1.76
PLXNB3-207ENST00000482654 HSP90AB3PQ58FF7 597 aa26.06■■□□□ 1.76
PLXNB3-207ENST00000482654 DPP8Q6V1X1 898 aaPredicted RBP26.06■■□□□ 1.76
PLXNB3-207ENST00000482654 PAXIP1Q6ZW49 1069 aaPredicted RBP26.06■■□□□ 1.76
PLXNB3-207ENST00000482654 GPRC5DQ9NZD1 345 aa26.06■■□□□ 1.76
PLXNB3-207ENST00000482654 HSPA8P11142 646 aaKnown RBP26.05■■□□□ 1.76
PLXNB3-207ENST00000482654 CXCL9Q07325 125 aa26.05■■□□□ 1.76
PLXNB3-207ENST00000482654 GRM1Q13255 1194 aa26.05■■□□□ 1.76
PLXNB3-207ENST00000482654 RALBP1Q15311 655 aa26.05■■□□□ 1.76
PLXNB3-207ENST00000482654 RTFDC1Q9BY42 306 aaPredicted RBP26.05■■□□□ 1.76
PLXNB3-207ENST00000482654 TRMT112Q9UI30 125 aaKnown RBP26.05■■□□□ 1.76
PLXNB3-207ENST00000482654 GMPSP49915 693 aaPredicted RBP26.04■■□□□ 1.76
PLXNB3-207ENST00000482654 ADARB2Q9NS39 739 aaKnown RBP26.04■■□□□ 1.76
PLXNB3-207ENST00000482654 CHPF2Q9P2E5 772 aa26.04■■□□□ 1.76
PLXNB3-207ENST00000482654 ZNRF3Q9ULT6 936 aa26.04■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms