RNA–Protein interactions for RNA: ENST00000482272.5

CTDSP1-208, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-208ENST00000482272 CRY2Q49AN0 593 aa17.54■□□□□ 0.4
CTDSP1-208ENST00000482272 HSP90AB3PQ58FF7 597 aa17.54■□□□□ 0.4
CTDSP1-208ENST00000482272 CC2D2BQ6DHV5 1058 aa17.54■□□□□ 0.4
CTDSP1-208ENST00000482272 C3orf67Q6ZVT6 689 aa17.54■□□□□ 0.4
CTDSP1-208ENST00000482272 COPS6Q7L5N1 327 aa17.54■□□□□ 0.4
CTDSP1-208ENST00000482272 RBM17Q96I25 401 aaKnown RBP17.54■□□□□ 0.4
CTDSP1-208ENST00000482272 DDNO94850 711 aaPredicted RBP17.53■□□□□ 0.4
CTDSP1-208ENST00000482272 NTSR2O95665 410 aa17.53■□□□□ 0.4
CTDSP1-208ENST00000482272 AIMP1Q12904 312 aaKnown RBP17.53■□□□□ 0.4
CTDSP1-208ENST00000482272 DNAJC5GQ8N7S2 189 aa17.53■□□□□ 0.4
CTDSP1-208ENST00000482272 NLRP3Q96P20 1036 aa17.53■□□□□ 0.4
CTDSP1-208ENST00000482272 UTP14AQ9BVJ6 771 aaKnown RBP17.53■□□□□ 0.4
CTDSP1-208ENST00000482272 HOXA10P31260 410 aaPredicted RBP17.52■□□□□ 0.4
CTDSP1-208ENST00000482272 GRIPAP1Q4V328 841 aa17.52■□□□□ 0.4
CTDSP1-208ENST00000482272 CFAP44Q96MT7 982 aa17.52■□□□□ 0.4
CTDSP1-208ENST00000482272 DDX21Q9NR30 783 aaKnown RBP eCLIP17.52■□□□□ 0.4
CTDSP1-208ENST00000482272 RIC1Q4ADV7 1423 aa17.52■□□□□ 0.4
CTDSP1-208ENST00000482272 COL4A5P29400 1685 aa17.52■□□□□ 0.39
CTDSP1-208ENST00000482272 APAF1O14727 1248 aa17.51■□□□□ 0.39
CTDSP1-208ENST00000482272 SLC10A5Q5PT55 438 aa17.51■□□□□ 0.39
CTDSP1-208ENST00000482272 SYNE4Q8N205 404 aa17.51■□□□□ 0.39
CTDSP1-208ENST00000482272 XAGE3Q8WTP9 111 aa17.51■□□□□ 0.39
CTDSP1-208ENST00000482272 CRAMP1Q96RY5 1269 aa17.51■□□□□ 0.39
CTDSP1-208ENST00000482272 ZNF277Q9NRM2 450 aaPredicted RBP17.51■□□□□ 0.39
CTDSP1-208ENST00000482272 IQCA1LA6NCM1 817 aa17.5■□□□□ 0.39
CTDSP1-208ENST00000482272 HOXB7P09629 217 aa17.5■□□□□ 0.39
CTDSP1-208ENST00000482272 IARSP41252 1262 aaKnown RBP17.5■□□□□ 0.39
CTDSP1-208ENST00000482272 PSMD1Q99460 953 aa17.5■□□□□ 0.39
CTDSP1-208ENST00000482272 TMX4Q9H1E5 349 aaPredicted RBP17.5■□□□□ 0.39
CTDSP1-208ENST00000482272 DDX60Q8IY21 1712 aaKnown RBP17.5■□□□□ 0.39
CTDSP1-208ENST00000482272 COL4A1P02462 1669 aa17.49■□□□□ 0.39
CTDSP1-208ENST00000482272 ZNF853P0CG23 659 aa17.49■□□□□ 0.39
CTDSP1-208ENST00000482272 TCIRG1Q13488 830 aa17.49■□□□□ 0.39
CTDSP1-208ENST00000482272 HDGFL1Q5TGJ6 251 aa17.49■□□□□ 0.39
CTDSP1-208ENST00000482272 JDP2Q8WYK2 163 aa17.49■□□□□ 0.39
CTDSP1-208ENST00000482272 MBIPQ9NS73 344 aa17.49■□□□□ 0.39
CTDSP1-208ENST00000482272 CHPF2Q9P2E5 772 aa17.49■□□□□ 0.39
CTDSP1-208ENST00000482272 RNF123Q5XPI4 1314 aa17.48■□□□□ 0.39
CTDSP1-208ENST00000482272 TAF1P21675 1872 aa17.48■□□□□ 0.39
CTDSP1-208ENST00000482272 HTRA3P83110 453 aa17.48■□□□□ 0.39
CTDSP1-208ENST00000482272 CALD1Q05682 793 aaKnown RBP17.48■□□□□ 0.39
CTDSP1-208ENST00000482272 ZNF428Q96B54 188 aa17.48■□□□□ 0.39
CTDSP1-208ENST00000482272 KLRG1Q96E93 195 aa17.48■□□□□ 0.39
CTDSP1-208ENST00000482272 DBF4Q9UBU7 674 aaPredicted RBP17.48■□□□□ 0.39
CTDSP1-208ENST00000482272 ZEB1P37275 1124 aaPredicted RBP17.47■□□□□ 0.39
CTDSP1-208ENST00000482272 CHADLQ6NUI6 762 aa17.47■□□□□ 0.39
CTDSP1-208ENST00000482272 ANKRD13DQ6ZTN6 518 aa17.47■□□□□ 0.39
CTDSP1-208ENST00000482272 TRMT112Q9UI30 125 aaKnown RBP17.47■□□□□ 0.39
CTDSP1-208ENST00000482272 FZD9O00144 591 aa17.46■□□□□ 0.39
CTDSP1-208ENST00000482272 TCERG1O14776 1098 aaKnown RBP17.46■□□□□ 0.39
CTDSP1-208ENST00000482272 PPEF1O14829 653 aaPredicted RBP17.46■□□□□ 0.39
CTDSP1-208ENST00000482272 GNAI1P63096 354 aa17.46■□□□□ 0.39
CTDSP1-208ENST00000482272 DUSP27Q5VZP5 1158 aa17.46■□□□□ 0.39
CTDSP1-208ENST00000482272 NLRP10Q86W26 655 aa17.46■□□□□ 0.39
CTDSP1-208ENST00000482272 PLBD2Q8NHP8 589 aa17.46■□□□□ 0.39
CTDSP1-208ENST00000482272 L3MBTL3Q96JM7 780 aaPredicted RBP17.46■□□□□ 0.39
CTDSP1-208ENST00000482272 HYPKQ9NX55 129 aa17.45■□□□□ 0.38
CTDSP1-208ENST00000482272 ZNF541Q9H0D2 1346 aa17.45■□□□□ 0.38
CTDSP1-208ENST00000482272 BBOX1O75936 387 aa17.44■□□□□ 0.38
CTDSP1-208ENST00000482272 EIF6P56537 245 aaKnown RBP17.44■□□□□ 0.38
CTDSP1-208ENST00000482272 IFT57Q9NWB7 429 aa17.44■□□□□ 0.38
CTDSP1-208ENST00000482272 HACL1Q9UJ83 578 aa17.44■□□□□ 0.38
CTDSP1-208ENST00000482272 SH3TC1Q8TE82 1336 aa17.44■□□□□ 0.38
CTDSP1-208ENST00000482272 SCN4AP35499 1836 aa17.43■□□□□ 0.38
CTDSP1-208ENST00000482272 POTEIP0CG38 1075 aa17.43■□□□□ 0.38
CTDSP1-208ENST00000482272 POTEJP0CG39 1038 aa17.43■□□□□ 0.38
CTDSP1-208ENST00000482272 GPC2Q8N158 579 aa17.43■□□□□ 0.38
CTDSP1-208ENST00000482272 LARGE2Q8N3Y3 721 aa17.43■□□□□ 0.38
CTDSP1-208ENST00000482272 CHMP4AQ9BY43 222 aa17.43■□□□□ 0.38
CTDSP1-208ENST00000482272 TAF1DQ9H5J8 278 aaPredicted RBP17.43■□□□□ 0.38
CTDSP1-208ENST00000482272 ATP6V0A2Q9Y487 856 aa17.43■□□□□ 0.38
CTDSP1-208ENST00000482272 LTBP1Q14766 1721 aa17.43■□□□□ 0.38
CTDSP1-208ENST00000482272 HCLS1P14317 486 aaPredicted RBP17.42■□□□□ 0.38
CTDSP1-208ENST00000482272 DDX46Q7L014 1031 aaKnown RBP17.42■□□□□ 0.38
CTDSP1-208ENST00000482272 PNMA8AQ86V59 439 aaPredicted RBP17.42■□□□□ 0.38
CTDSP1-208ENST00000482272 LDHDQ86WU2 507 aa17.42■□□□□ 0.38
CTDSP1-208ENST00000482272 JMYQ8N9B5 988 aa17.42■□□□□ 0.38
CTDSP1-208ENST00000482272 VPS33BQ9H267 617 aa17.42■□□□□ 0.38
CTDSP1-208ENST00000482272 ADAMTSL1Q8N6G6 1762 aa17.41■□□□□ 0.38
CTDSP1-208ENST00000482272 ELL2O00472 640 aaPredicted RBP17.41■□□□□ 0.38
CTDSP1-208ENST00000482272 SP8Q8IXZ3 490 aa17.41■□□□□ 0.38
CTDSP1-208ENST00000482272 C8orf58Q8NAV2 365 aa17.41■□□□□ 0.38
CTDSP1-208ENST00000482272 SUPT20HQ8NEM7 779 aa17.41■□□□□ 0.38
CTDSP1-208ENST00000482272 CLEC11AQ9Y240 323 aa17.41■□□□□ 0.38
CTDSP1-208ENST00000482272 ABCC4O15439 1325 aa17.41■□□□□ 0.38
CTDSP1-208ENST00000482272 EPHX2P34913 555 aa17.4■□□□□ 0.38
CTDSP1-208ENST00000482272 EAPPQ56P03 285 aaPredicted RBP17.4■□□□□ 0.38
CTDSP1-208ENST00000482272 RIC3Q7Z5B4 369 aa17.4■□□□□ 0.38
CTDSP1-208ENST00000482272 ISCA1Q9BUE6 129 aa17.4■□□□□ 0.38
CTDSP1-208ENST00000482272 PHAXQ9H814 394 aaKnown RBP17.4■□□□□ 0.38
CTDSP1-208ENST00000482272 GJA3Q9Y6H8 435 aa17.4■□□□□ 0.38
CTDSP1-208ENST00000482272 LRRC37AA6NMS7 1700 aa17.4■□□□□ 0.38
CTDSP1-208ENST00000482272 DUOX1Q9NRD9 1551 aa17.4■□□□□ 0.38
CTDSP1-208ENST00000482272 ZNF316A6NFI3 1004 aaPredicted RBP17.39■□□□□ 0.37
CTDSP1-208ENST00000482272 ATP5J2-PTCD1G3V325 749 aa17.39■□□□□ 0.37
CTDSP1-208ENST00000482272 NIM1KQ8IY84 436 aa17.39■□□□□ 0.37
CTDSP1-208ENST00000482272 TSPYL6Q8N831 410 aa17.39■□□□□ 0.37
CTDSP1-208ENST00000482272 PPIP5K2O43314 1243 aa17.38■□□□□ 0.37
CTDSP1-208ENST00000482272 LMOD1P29536 600 aaPredicted RBP17.38■□□□□ 0.37
CTDSP1-208ENST00000482272 GOLGA2Q08379 1002 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms