RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 ADAMTS8Q9UP79 889 aa19.93■□□□□ 0.78
LIMS3-203ENST00000480744 KRT24Q2M2I5 525 aa19.92■□□□□ 0.78
LIMS3-203ENST00000480744 PARP10Q53GL7 1025 aa19.92■□□□□ 0.78
LIMS3-203ENST00000480744 TRIM35Q9UPQ4 493 aa19.92■□□□□ 0.78
LIMS3-203ENST00000480744 LAMB2P55268 1798 aa19.92■□□□□ 0.78
LIMS3-203ENST00000480744 CHL1O00533 1208 aa19.91■□□□□ 0.78
LIMS3-203ENST00000480744 TCERG1O14776 1098 aaKnown RBP19.91■□□□□ 0.78
LIMS3-203ENST00000480744 IARSP41252 1262 aaKnown RBP19.91■□□□□ 0.78
LIMS3-203ENST00000480744 COPS6Q7L5N1 327 aa19.91■□□□□ 0.78
LIMS3-203ENST00000480744 XAGE3Q8WTP9 111 aa19.91■□□□□ 0.78
LIMS3-203ENST00000480744 RBM17Q96I25 401 aaKnown RBP19.91■□□□□ 0.78
LIMS3-203ENST00000480744 ZNF541Q9H0D2 1346 aa19.91■□□□□ 0.78
LIMS3-203ENST00000480744 IQCA1LA6NCM1 817 aa19.9■□□□□ 0.78
LIMS3-203ENST00000480744 HOXA10P31260 410 aaPredicted RBP19.9■□□□□ 0.78
LIMS3-203ENST00000480744 C3orf67Q6ZVT6 689 aa19.9■□□□□ 0.78
LIMS3-203ENST00000480744 UTP14AQ9BVJ6 771 aaKnown RBP19.9■□□□□ 0.78
LIMS3-203ENST00000480744 PRKRIP1Q9H875 184 aaPredicted RBP19.9■□□□□ 0.78
LIMS3-203ENST00000480744 POTEIP0CG38 1075 aa19.89■□□□□ 0.77
LIMS3-203ENST00000480744 POTEJP0CG39 1038 aa19.89■□□□□ 0.77
LIMS3-203ENST00000480744 CHADLQ6NUI6 762 aa19.89■□□□□ 0.77
LIMS3-203ENST00000480744 NLRP3Q96P20 1036 aa19.89■□□□□ 0.77
LIMS3-203ENST00000480744 PPEF1O14829 653 aaPredicted RBP19.88■□□□□ 0.77
LIMS3-203ENST00000480744 HSP90AB3PQ58FF7 597 aa19.88■□□□□ 0.77
LIMS3-203ENST00000480744 CC2D2BQ6DHV5 1058 aa19.88■□□□□ 0.77
LIMS3-203ENST00000480744 CRAMP1Q96RY5 1269 aa19.88■□□□□ 0.77
LIMS3-203ENST00000480744 PSMD1Q99460 953 aa19.88■□□□□ 0.77
LIMS3-203ENST00000480744 DDX21Q9NR30 783 aaKnown RBP eCLIP19.88■□□□□ 0.77
LIMS3-203ENST00000480744 SNED1Q8TER0 1413 aa19.87■□□□□ 0.77
LIMS3-203ENST00000480744 IFFO2Q5TF58 517 aa19.87■□□□□ 0.77
LIMS3-203ENST00000480744 HDGFL1Q5TGJ6 251 aa19.87■□□□□ 0.77
LIMS3-203ENST00000480744 SLC51AQ86UW1 340 aa19.87■□□□□ 0.77
LIMS3-203ENST00000480744 JDP2Q8WYK2 163 aa19.87■□□□□ 0.77
LIMS3-203ENST00000480744 L3MBTL3Q96JM7 780 aaPredicted RBP19.87■□□□□ 0.77
LIMS3-203ENST00000480744 CHPF2Q9P2E5 772 aa19.87■□□□□ 0.77
LIMS3-203ENST00000480744 TAF1DQ9H5J8 278 aaPredicted RBP19.86■□□□□ 0.77
LIMS3-203ENST00000480744 FZD9O00144 591 aa19.85■□□□□ 0.77
LIMS3-203ENST00000480744 EAPPQ56P03 285 aaPredicted RBP19.85■□□□□ 0.77
LIMS3-203ENST00000480744 NLRP10Q86W26 655 aa19.85■□□□□ 0.77
LIMS3-203ENST00000480744 JMYQ8N9B5 988 aa19.85■□□□□ 0.77
LIMS3-203ENST00000480744 ZNF428Q96B54 188 aa19.85■□□□□ 0.77
LIMS3-203ENST00000480744 TMX4Q9H1E5 349 aaPredicted RBP19.85■□□□□ 0.77
LIMS3-203ENST00000480744 HACL1Q9UJ83 578 aa19.85■□□□□ 0.77
LIMS3-203ENST00000480744 TAF1P21675 1872 aa19.85■□□□□ 0.77
LIMS3-203ENST00000480744 COL4A5P29400 1685 aa19.84■□□□□ 0.77
LIMS3-203ENST00000480744 RNF123Q5XPI4 1314 aa19.84■□□□□ 0.77
LIMS3-203ENST00000480744 HCLS1P14317 486 aaPredicted RBP19.84■□□□□ 0.77
LIMS3-203ENST00000480744 TCIRG1Q13488 830 aa19.84■□□□□ 0.77
LIMS3-203ENST00000480744 SLC10A5Q5PT55 438 aa19.84■□□□□ 0.77
LIMS3-203ENST00000480744 LDHDQ86WU2 507 aa19.84■□□□□ 0.77
LIMS3-203ENST00000480744 LARGE2Q8N3Y3 721 aa19.84■□□□□ 0.77
LIMS3-203ENST00000480744 CFAP44Q96MT7 982 aa19.84■□□□□ 0.77
LIMS3-203ENST00000480744 TRMT112Q9UI30 125 aaKnown RBP19.84■□□□□ 0.77
LIMS3-203ENST00000480744 ABCC4O15439 1325 aa19.83■□□□□ 0.77
LIMS3-203ENST00000480744 EIF6P56537 245 aaKnown RBP19.83■□□□□ 0.77
LIMS3-203ENST00000480744 GRIPAP1Q4V328 841 aa19.83■□□□□ 0.77
LIMS3-203ENST00000480744 MBIPQ9NS73 344 aa19.83■□□□□ 0.77
LIMS3-203ENST00000480744 CLEC11AQ9Y240 323 aa19.83■□□□□ 0.77
LIMS3-203ENST00000480744 GJA3Q9Y6H8 435 aa19.83■□□□□ 0.77
LIMS3-203ENST00000480744 APAF1O14727 1248 aa19.82■□□□□ 0.76
LIMS3-203ENST00000480744 HOXB7P09629 217 aa19.82■□□□□ 0.76
LIMS3-203ENST00000480744 EPHX2P34913 555 aa19.82■□□□□ 0.76
LIMS3-203ENST00000480744 DUSP27Q5VZP5 1158 aa19.82■□□□□ 0.76
LIMS3-203ENST00000480744 GPC2Q8N158 579 aa19.82■□□□□ 0.76
LIMS3-203ENST00000480744 DBF4Q9UBU7 674 aaPredicted RBP19.82■□□□□ 0.76
LIMS3-203ENST00000480744 DDX60Q8IY21 1712 aaKnown RBP19.82■□□□□ 0.76
LIMS3-203ENST00000480744 SH3TC1Q8TE82 1336 aa19.81■□□□□ 0.76
LIMS3-203ENST00000480744 ATP6V0A2Q9Y487 856 aa19.81■□□□□ 0.76
LIMS3-203ENST00000480744 ADAMTSL1Q8N6G6 1762 aa19.8■□□□□ 0.76
LIMS3-203ENST00000480744 PPIP5K2O43314 1243 aa19.8■□□□□ 0.76
LIMS3-203ENST00000480744 ANKRD13DQ6ZTN6 518 aa19.8■□□□□ 0.76
LIMS3-203ENST00000480744 NIM1KQ8IY84 436 aa19.8■□□□□ 0.76
LIMS3-203ENST00000480744 PLBD2Q8NHP8 589 aa19.8■□□□□ 0.76
LIMS3-203ENST00000480744 DDX46Q7L014 1031 aaKnown RBP19.79■□□□□ 0.76
LIMS3-203ENST00000480744 CREBZFQ9NS37 354 aa19.79■□□□□ 0.76
LIMS3-203ENST00000480744 HYPKQ9NX55 129 aa19.79■□□□□ 0.76
LIMS3-203ENST00000480744 ATP5J2-PTCD1G3V325 749 aa19.78■□□□□ 0.76
LIMS3-203ENST00000480744 ELL2O00472 640 aaPredicted RBP19.78■□□□□ 0.76
LIMS3-203ENST00000480744 LMOD1P29536 600 aaPredicted RBP19.78■□□□□ 0.76
LIMS3-203ENST00000480744 ZEB1P37275 1124 aaPredicted RBP19.78■□□□□ 0.76
LIMS3-203ENST00000480744 GNAI1P63096 354 aa19.78■□□□□ 0.76
LIMS3-203ENST00000480744 CALD1Q05682 793 aaKnown RBP19.78■□□□□ 0.76
LIMS3-203ENST00000480744 AOC3Q16853 763 aa19.78■□□□□ 0.76
LIMS3-203ENST00000480744 PNMA8AQ86V59 439 aaPredicted RBP19.78■□□□□ 0.76
LIMS3-203ENST00000480744 MKRN1Q9UHC7 482 aaKnown RBP19.78■□□□□ 0.76
LIMS3-203ENST00000480744 LTBP1Q14766 1721 aa19.78■□□□□ 0.76
LIMS3-203ENST00000480744 BBOX1O75936 387 aa19.77■□□□□ 0.76
LIMS3-203ENST00000480744 DPP8Q6V1X1 898 aaPredicted RBP19.77■□□□□ 0.76
LIMS3-203ENST00000480744 IFT57Q9NWB7 429 aa19.77■□□□□ 0.76
LIMS3-203ENST00000480744 ZNF853P0CG23 659 aa19.76■□□□□ 0.75
LIMS3-203ENST00000480744 RTL5Q5HYW3 569 aaPredicted RBP19.76■□□□□ 0.75
LIMS3-203ENST00000480744 SP8Q8IXZ3 490 aa19.76■□□□□ 0.75
LIMS3-203ENST00000480744 SUPT20HQ8NEM7 779 aa19.76■□□□□ 0.75
LIMS3-203ENST00000480744 FAM89AQ96GI7 184 aa19.76■□□□□ 0.75
LIMS3-203ENST00000480744 PASKQ96RG2 1323 aa19.76■□□□□ 0.75
LIMS3-203ENST00000480744 GRAPQ13588 217 aa19.75■□□□□ 0.75
LIMS3-203ENST00000480744 MAP1SQ66K74 1059 aaPredicted RBP19.75■□□□□ 0.75
LIMS3-203ENST00000480744 MPNDQ8N594 471 aa19.75■□□□□ 0.75
LIMS3-203ENST00000480744 GRAPLQ8TC17 118 aaPredicted RBP19.75■□□□□ 0.75
LIMS3-203ENST00000480744 ISCA1Q9BUE6 129 aa19.75■□□□□ 0.75
LIMS3-203ENST00000480744 ITGBL1O95965 494 aaPredicted RBP19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms