RNA–Protein interactions for RNA: ENST00000479866.5

RAPGEF3-209, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2

Gene RAPGEF3, Length 3,917 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-209ENST00000479866 LDHAL6AQ6ZMR3 332 aa13.84□□□□□ -0.19
RAPGEF3-209ENST00000479866 NDUFB9Q9Y6M9 179 aa13.84□□□□□ -0.19
RAPGEF3-209ENST00000479866 NCAPD2Q15021 1401 aa13.83□□□□□ -0.2
RAPGEF3-209ENST00000479866 WASHC4Q2M389 1173 aa13.83□□□□□ -0.2
RAPGEF3-209ENST00000479866 HELBQ8NG08 1087 aaPredicted RBP13.83□□□□□ -0.2
RAPGEF3-209ENST00000479866 GNPATO15228 680 aa13.83□□□□□ -0.2
RAPGEF3-209ENST00000479866 VPS37DQ86XT2 251 aa13.83□□□□□ -0.2
RAPGEF3-209ENST00000479866 CAMTA1Q9Y6Y1 1673 aa13.82□□□□□ -0.2
RAPGEF3-209ENST00000479866 KDM6AO15550 1401 aaPredicted RBP13.82□□□□□ -0.2
RAPGEF3-209ENST00000479866 FOXD4L6Q3SYB3 417 aaPredicted RBP13.82□□□□□ -0.2
RAPGEF3-209ENST00000479866 HSP90AB3PQ58FF7 597 aa13.82□□□□□ -0.2
RAPGEF3-209ENST00000479866 FOXD4L3Q6VB84 417 aaPredicted RBP13.82□□□□□ -0.2
RAPGEF3-209ENST00000479866 MARCH10Q8NA82 808 aaPredicted RBP13.82□□□□□ -0.2
RAPGEF3-209ENST00000479866 RUFY2Q8WXA3 655 aa13.82□□□□□ -0.2
RAPGEF3-209ENST00000479866 SMARCC1Q92922 1105 aaPredicted RBP13.82□□□□□ -0.2
RAPGEF3-209ENST00000479866 CCNL1Q9UK58 526 aaPredicted RBP13.82□□□□□ -0.2
RAPGEF3-209ENST00000479866 AFF2P51816 1311 aa13.82□□□□□ -0.2
RAPGEF3-209ENST00000479866 GLRX3O76003 335 aaKnown RBP13.82□□□□□ -0.2
RAPGEF3-209ENST00000479866 TNNT3P45378 269 aaPredicted RBP13.82□□□□□ -0.2
RAPGEF3-209ENST00000479866 ECHDC1Q9NTX5 307 aa13.82□□□□□ -0.2
RAPGEF3-209ENST00000479866 COL5A2P05997 1499 aaPredicted RBP13.82□□□□□ -0.2
RAPGEF3-209ENST00000479866 ADCY9O60503 1353 aa13.82□□□□□ -0.2
RAPGEF3-209ENST00000479866 TFCP2Q12800 502 aa13.82□□□□□ -0.2
RAPGEF3-209ENST00000479866 TEX2Q8IWB9 1127 aa13.82□□□□□ -0.2
RAPGEF3-209ENST00000479866 SYNE4Q8N205 404 aa13.82□□□□□ -0.2
RAPGEF3-209ENST00000479866 ST18O60284 1047 aa13.81□□□□□ -0.2
RAPGEF3-209ENST00000479866 TIMM10P62072 90 aa13.81□□□□□ -0.2
RAPGEF3-209ENST00000479866 AK7Q96M32 723 aa13.81□□□□□ -0.2
RAPGEF3-209ENST00000479866 CCDC87Q9NVE4 849 aa13.81□□□□□ -0.2
RAPGEF3-209ENST00000479866 IRS4O14654 1257 aaPredicted RBP13.81□□□□□ -0.2
RAPGEF3-209ENST00000479866 GSPT1P15170 499 aaKnown RBP13.81□□□□□ -0.2
RAPGEF3-209ENST00000479866 NEK4P51957 841 aa13.81□□□□□ -0.2
RAPGEF3-209ENST00000479866 EPHA10Q5JZY3 1008 aa13.81□□□□□ -0.2
RAPGEF3-209ENST00000479866 TTC39AQ5SRH9 613 aa13.81□□□□□ -0.2
RAPGEF3-209ENST00000479866 SPATA31A1Q5TZJ5 1347 aa13.81□□□□□ -0.2
RAPGEF3-209ENST00000479866 SSH3Q8TE77 659 aa13.81□□□□□ -0.2
RAPGEF3-209ENST00000479866 ZNF652Q9Y2D9 606 aa13.81□□□□□ -0.2
RAPGEF3-209ENST00000479866 MED1Q15648 1581 aaPredicted RBP13.8□□□□□ -0.2
RAPGEF3-209ENST00000479866 CRKLP46109 303 aaKnown RBP13.8□□□□□ -0.2
RAPGEF3-209ENST00000479866 PDIA6Q15084 440 aa13.8□□□□□ -0.2
RAPGEF3-209ENST00000479866 HLFQ16534 295 aa13.8□□□□□ -0.2
RAPGEF3-209ENST00000479866 UPF3BQ9BZI7 483 aaKnown RBP13.8□□□□□ -0.2
RAPGEF3-209ENST00000479866 KIF1AQ12756 1690 aa13.8□□□□□ -0.2
RAPGEF3-209ENST00000479866 LTN1O94822 1766 aa13.8□□□□□ -0.2
RAPGEF3-209ENST00000479866 PTMAP06454 111 aaKnown RBP13.8□□□□□ -0.2
RAPGEF3-209ENST00000479866 RFC4P35249 363 aa13.8□□□□□ -0.2
RAPGEF3-209ENST00000479866 TCIRG1Q13488 830 aa13.8□□□□□ -0.2
RAPGEF3-209ENST00000479866 DDX46Q7L014 1031 aaKnown RBP13.8□□□□□ -0.2
RAPGEF3-209ENST00000479866 ZNF830Q96NB3 372 aaPredicted RBP13.8□□□□□ -0.2
RAPGEF3-209ENST00000479866 CCDC158Q5M9N0 1113 aa13.79□□□□□ -0.2
RAPGEF3-209ENST00000479866 ANKRD18BA2A2Z9 1011 aa13.79□□□□□ -0.2
RAPGEF3-209ENST00000479866 CCDC191Q8NCU4 936 aa13.79□□□□□ -0.2
RAPGEF3-209ENST00000479866 JCADQ9P266 1359 aa13.79□□□□□ -0.2
RAPGEF3-209ENST00000479866 SEPT12Q8IYM1 358 aa13.79□□□□□ -0.2
RAPGEF3-209ENST00000479866 TOMM22Q9NS69 142 aa13.79□□□□□ -0.2
RAPGEF3-209ENST00000479866 NWD1Q149M9 1564 aa13.78□□□□□ -0.2
RAPGEF3-209ENST00000479866 OVOS2A0A0G2JMS6 1433 aa13.78□□□□□ -0.2
RAPGEF3-209ENST00000479866 EDC3Q96F86 508 aaKnown RBP13.78□□□□□ -0.2
RAPGEF3-209ENST00000479866 TBC1D32Q96NH3 1257 aa13.78□□□□□ -0.2
RAPGEF3-209ENST00000479866 LARP6Q9BRS8 491 aaKnown RBP13.78□□□□□ -0.2
RAPGEF3-209ENST00000479866 IQSEC3Q9UPP2 1182 aaPredicted RBP13.78□□□□□ -0.2
RAPGEF3-209ENST00000479866 GOLIM4O00461 696 aa13.78□□□□□ -0.2
RAPGEF3-209ENST00000479866 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.77□□□□□ -0.2
RAPGEF3-209ENST00000479866 TRPC5Q9UL62 973 aaPredicted RBP13.77□□□□□ -0.2
RAPGEF3-209ENST00000479866 RTCBQ9Y3I0 505 aaKnown RBP13.77□□□□□ -0.2
RAPGEF3-209ENST00000479866 TRIM37O94972 964 aa13.77□□□□□ -0.21
RAPGEF3-209ENST00000479866 IFIT1P09914 478 aaKnown RBP13.77□□□□□ -0.21
RAPGEF3-209ENST00000479866 L1TD1Q5T7N2 865 aaKnown RBP13.77□□□□□ -0.21
RAPGEF3-209ENST00000479866 IGHMBP2P38935 993 aaKnown RBP13.77□□□□□ -0.21
RAPGEF3-209ENST00000479866 NBPF5PQ86XG9 351 aaPredicted RBP13.77□□□□□ -0.21
RAPGEF3-209ENST00000479866 DBNDD2Q9BQY9 259 aa13.77□□□□□ -0.21
RAPGEF3-209ENST00000479866 DLG5Q8TDM6 1919 aa13.77□□□□□ -0.21
RAPGEF3-209ENST00000479866 ZKSCAN1P17029 563 aaPredicted RBP13.76□□□□□ -0.21
RAPGEF3-209ENST00000479866 STK11IPQ8N1F8 1099 aa13.76□□□□□ -0.21
RAPGEF3-209ENST00000479866 THRAP3Q9Y2W1 955 aaKnown RBP13.76□□□□□ -0.21
RAPGEF3-209ENST00000479866 EAF2Q96CJ1 260 aaPredicted RBP13.76□□□□□ -0.21
RAPGEF3-209ENST00000479866 RRAGDQ9NQL2 400 aaPredicted RBP13.76□□□□□ -0.21
RAPGEF3-209ENST00000479866 IDH1O75874 414 aaKnown RBP13.76□□□□□ -0.21
RAPGEF3-209ENST00000479866 GZF1Q9H116 711 aaPredicted RBP13.76□□□□□ -0.21
RAPGEF3-209ENST00000479866 SLIT3O75094 1523 aa13.76□□□□□ -0.21
RAPGEF3-209ENST00000479866 LRRC24Q50LG9 513 aa13.75□□□□□ -0.21
RAPGEF3-209ENST00000479866 UTP14AQ9BVJ6 771 aaKnown RBP13.75□□□□□ -0.21
RAPGEF3-209ENST00000479866 TBC1D2Q9BYX2 928 aa13.75□□□□□ -0.21
RAPGEF3-209ENST00000479866 PUS3Q9BZE2 481 aaKnown RBP13.75□□□□□ -0.21
RAPGEF3-209ENST00000479866 PALLDQ8WX93 1383 aa13.75□□□□□ -0.21
RAPGEF3-209ENST00000479866 SPATA31A5Q5VU36 1347 aa13.75□□□□□ -0.21
RAPGEF3-209ENST00000479866 SPATA31A7Q8IWB4 1347 aa13.75□□□□□ -0.21
RAPGEF3-209ENST00000479866 FBXW7Q969H0 707 aa13.75□□□□□ -0.21
RAPGEF3-209ENST00000479866 SETDB2Q96T68 719 aa13.75□□□□□ -0.21
RAPGEF3-209ENST00000479866 TLR7Q9NYK1 1049 aaKnown RBP13.75□□□□□ -0.21
RAPGEF3-209ENST00000479866 MAP3K15Q6ZN16 1313 aa13.75□□□□□ -0.21
RAPGEF3-209ENST00000479866 ITGA6P23229 1130 aa13.75□□□□□ -0.21
RAPGEF3-209ENST00000479866 NFKBIBQ15653 356 aa13.75□□□□□ -0.21
RAPGEF3-209ENST00000479866 GJD4Q96KN9 370 aaPredicted RBP13.75□□□□□ -0.21
RAPGEF3-209ENST00000479866 CGNQ9P2M7 1197 aaKnown RBP13.75□□□□□ -0.21
RAPGEF3-209ENST00000479866 GIGYF2Q6Y7W6 1299 aaKnown RBP13.74□□□□□ -0.21
RAPGEF3-209ENST00000479866 CYP19A1P11511 503 aaPredicted RBP13.74□□□□□ -0.21
RAPGEF3-209ENST00000479866 ABCF2Q9UG63 623 aa13.74□□□□□ -0.21
RAPGEF3-209ENST00000479866 IBTKQ9P2D0 1353 aaPredicted RBP13.74□□□□□ -0.21
RAPGEF3-209ENST00000479866 G3V3G9 751 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms