RNA–Protein interactions for RNA: ENST00000479542.1

ABCF1-206, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 2

Gene ABCF1, Length 893 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-206ENST00000479542 SLC10A5Q5PT55 438 aa17.56■□□□□ 0.4
ABCF1-206ENST00000479542 TTLL7Q6ZT98 887 aa17.56■□□□□ 0.4
ABCF1-206ENST00000479542 PPP1R42Q7Z4L9 355 aa17.56■□□□□ 0.4
ABCF1-206ENST00000479542 DLG5Q8TDM6 1919 aa17.56■□□□□ 0.4
ABCF1-206ENST00000479542 SUSD4Q5VX71 490 aa17.55■□□□□ 0.4
ABCF1-206ENST00000479542 OLFM4Q6UX06 510 aa17.55■□□□□ 0.4
ABCF1-206ENST00000479542 LRP10Q7Z4F1 713 aa17.55■□□□□ 0.4
ABCF1-206ENST00000479542 RBM17Q96I25 401 aaKnown RBP17.55■□□□□ 0.4
ABCF1-206ENST00000479542 MKRN1Q9UHC7 482 aaKnown RBP17.55■□□□□ 0.4
ABCF1-206ENST00000479542 RRP7AQ9Y3A4 280 aaKnown RBP17.55■□□□□ 0.4
ABCF1-206ENST00000479542 ABCC12Q96J65 1359 aa17.54■□□□□ 0.4
ABCF1-206ENST00000479542 UBN2Q6ZU65 1347 aa17.54■□□□□ 0.4
ABCF1-206ENST00000479542 RASSF10A6NK89 507 aa17.54■□□□□ 0.4
ABCF1-206ENST00000479542 FAM177BA6PVY3 158 aa17.54■□□□□ 0.4
ABCF1-206ENST00000479542 NTSR2O95665 410 aa17.54■□□□□ 0.4
ABCF1-206ENST00000479542 EIF6P56537 245 aaKnown RBP17.54■□□□□ 0.4
ABCF1-206ENST00000479542 NUTM1Q86Y26 1132 aa17.54■□□□□ 0.4
ABCF1-206ENST00000479542 CNTROBQ8N137 903 aa17.54■□□□□ 0.4
ABCF1-206ENST00000479542 RPGRQ92834 1020 aaKnown RBP17.54■□□□□ 0.4
ABCF1-206ENST00000479542 EAPPQ56P03 285 aaPredicted RBP17.53■□□□□ 0.4
ABCF1-206ENST00000479542 NLRP3Q96P20 1036 aa17.53■□□□□ 0.4
ABCF1-206ENST00000479542 MAPK8IP3Q9UPT6 1336 aa17.52■□□□□ 0.4
ABCF1-206ENST00000479542 PDIA6Q15084 440 aa17.52■□□□□ 0.4
ABCF1-206ENST00000479542 NGEFQ8N5V2 710 aa17.52■□□□□ 0.4
ABCF1-206ENST00000479542 WBP1LQ9NX94 342 aa17.52■□□□□ 0.4
ABCF1-206ENST00000479542 CLEC11AQ9Y240 323 aa17.52■□□□□ 0.4
ABCF1-206ENST00000479542 MYL6BP14649 208 aa17.51■□□□□ 0.39
ABCF1-206ENST00000479542 VEGFBP49765 207 aa17.51■□□□□ 0.39
ABCF1-206ENST00000479542 USP50Q70EL3 339 aaPredicted RBP17.51■□□□□ 0.39
ABCF1-206ENST00000479542 RTFDC1Q9BY42 306 aaPredicted RBP17.51■□□□□ 0.39
ABCF1-206ENST00000479542 ZBTB3Q9H5J0 574 aa17.51■□□□□ 0.39
ABCF1-206ENST00000479542 LMOD1P29536 600 aaPredicted RBP17.5■□□□□ 0.39
ABCF1-206ENST00000479542 CTCFP49711 727 aaPredicted RBP17.5■□□□□ 0.39
ABCF1-206ENST00000479542 LMOD3Q0VAK6 560 aa17.5■□□□□ 0.39
ABCF1-206ENST00000479542 DEFB115Q30KQ5 88 aa17.5■□□□□ 0.39
ABCF1-206ENST00000479542 HSP90AB3PQ58FF7 597 aa17.5■□□□□ 0.39
ABCF1-206ENST00000479542 TMX4Q9H1E5 349 aaPredicted RBP17.5■□□□□ 0.39
ABCF1-206ENST00000479542 ATP6V0A2Q9Y487 856 aa17.5■□□□□ 0.39
ABCF1-206ENST00000479542 PPEF1O14829 653 aaPredicted RBP17.49■□□□□ 0.39
ABCF1-206ENST00000479542 FOXN1O15353 648 aa17.49■□□□□ 0.39
ABCF1-206ENST00000479542 BBOX1O75936 387 aa17.49■□□□□ 0.39
ABCF1-206ENST00000479542 GPTP24298 496 aa17.49■□□□□ 0.39
ABCF1-206ENST00000479542 RALBP1Q15311 655 aa17.49■□□□□ 0.39
ABCF1-206ENST00000479542 LARGE2Q8N3Y3 721 aa17.49■□□□□ 0.39
ABCF1-206ENST00000479542 SUPT20HQ8NEM7 779 aa17.49■□□□□ 0.39
ABCF1-206ENST00000479542 THUMPD2Q9BTF0 503 aaKnown RBP17.49■□□□□ 0.39
ABCF1-206ENST00000479542 UTP14AQ9BVJ6 771 aaKnown RBP17.49■□□□□ 0.39
ABCF1-206ENST00000479542 TSPYL4Q9UJ04 414 aa17.49■□□□□ 0.39
ABCF1-206ENST00000479542 SCNN1DP51172 638 aa17.48■□□□□ 0.39
ABCF1-206ENST00000479542 AIDAQ96BJ3 306 aa17.48■□□□□ 0.39
ABCF1-206ENST00000479542 DDX21Q9NR30 783 aaKnown RBP eCLIP17.48■□□□□ 0.39
ABCF1-206ENST00000479542 RIPK4P57078 832 aa17.47■□□□□ 0.39
ABCF1-206ENST00000479542 MAP2K1Q02750 393 aaPredicted RBP17.47■□□□□ 0.39
ABCF1-206ENST00000479542 MAP1SQ66K74 1059 aaPredicted RBP17.47■□□□□ 0.39
ABCF1-206ENST00000479542 SP8Q8IXZ3 490 aa17.47■□□□□ 0.39
ABCF1-206ENST00000479542 CDHR2Q9BYE9 1310 aa17.47■□□□□ 0.39
ABCF1-206ENST00000479542 COL4A5P29400 1685 aa17.46■□□□□ 0.39
ABCF1-206ENST00000479542 TMPOP42166 694 aaKnown RBP17.46■□□□□ 0.39
ABCF1-206ENST00000479542 TMC4Q7Z404 712 aa17.46■□□□□ 0.39
ABCF1-206ENST00000479542 NIM1KQ8IY84 436 aa17.46■□□□□ 0.39
ABCF1-206ENST00000479542 EPS15P42566 896 aa17.45■□□□□ 0.38
ABCF1-206ENST00000479542 PGAP2Q9UHJ9 254 aa17.45■□□□□ 0.38
ABCF1-206ENST00000479542 ZNRF3Q9ULT6 936 aa17.45■□□□□ 0.38
ABCF1-206ENST00000479542 GJA3Q9Y6H8 435 aa17.45■□□□□ 0.38
ABCF1-206ENST00000479542 WDR33Q9C0J8 1336 aaKnown RBP17.45■□□□□ 0.38
ABCF1-206ENST00000479542 CHL1O00533 1208 aa17.44■□□□□ 0.38
ABCF1-206ENST00000479542 TCIRG1Q13488 830 aa17.44■□□□□ 0.38
ABCF1-206ENST00000479542 C3orf67Q6ZVT6 689 aa17.44■□□□□ 0.38
ABCF1-206ENST00000479542 NLRP10Q86W26 655 aa17.44■□□□□ 0.38
ABCF1-206ENST00000479542 ZC3H15Q8WU90 426 aaKnown RBP17.44■□□□□ 0.38
ABCF1-206ENST00000479542 ADARB2Q9NS39 739 aaKnown RBP17.44■□□□□ 0.38
ABCF1-206ENST00000479542 GPRC5DQ9NZD1 345 aa17.44■□□□□ 0.38
ABCF1-206ENST00000479542 LTBP1Q14766 1721 aa17.44■□□□□ 0.38
ABCF1-206ENST00000479542 PPIP5K2O43314 1243 aa17.43■□□□□ 0.38
ABCF1-206ENST00000479542 HOXB7P09629 217 aa17.43■□□□□ 0.38
ABCF1-206ENST00000479542 EIF2S2P20042 333 aaKnown RBP17.43■□□□□ 0.38
ABCF1-206ENST00000479542 ECE1P42892 770 aa17.43■□□□□ 0.38
ABCF1-206ENST00000479542 KIAA2012Q0VF49 1180 aa17.43■□□□□ 0.38
ABCF1-206ENST00000479542 COPS6Q7L5N1 327 aa17.43■□□□□ 0.38
ABCF1-206ENST00000479542 ABCC4O15439 1325 aa17.43■□□□□ 0.38
ABCF1-206ENST00000479542 CAPN15O75808 1086 aa17.42■□□□□ 0.38
ABCF1-206ENST00000479542 CXCL9Q07325 125 aa17.42■□□□□ 0.38
ABCF1-206ENST00000479542 MPNDQ8N594 471 aa17.42■□□□□ 0.38
ABCF1-206ENST00000479542 HHIPL1Q96JK4 782 aa17.42■□□□□ 0.38
ABCF1-206ENST00000479542 ANKRD36CQ5JPF3 1778 aa17.42■□□□□ 0.38
ABCF1-206ENST00000479542 TNIP1Q15025 636 aa17.41■□□□□ 0.38
ABCF1-206ENST00000479542 AOC3Q16853 763 aa17.41■□□□□ 0.38
ABCF1-206ENST00000479542 PROSER3Q2NL68 480 aa17.41■□□□□ 0.38
ABCF1-206ENST00000479542 CST9Q5W186 159 aa17.41■□□□□ 0.38
ABCF1-206ENST00000479542 DDX46Q7L014 1031 aaKnown RBP17.41■□□□□ 0.38
ABCF1-206ENST00000479542 TLL2Q9Y6L7 1015 aa17.41■□□□□ 0.38
ABCF1-206ENST00000479542 SH3TC1Q8TE82 1336 aa17.41■□□□□ 0.38
ABCF1-206ENST00000479542 MAP2K2P36507 400 aa17.4■□□□□ 0.38
ABCF1-206ENST00000479542 GRAPQ13588 217 aa17.4■□□□□ 0.38
ABCF1-206ENST00000479542 DPP8Q6V1X1 898 aaPredicted RBP17.4■□□□□ 0.38
ABCF1-206ENST00000479542 GRAPLQ8TC17 118 aaPredicted RBP17.4■□□□□ 0.38
ABCF1-206ENST00000479542 ABT1Q9ULW3 272 aaKnown RBP17.4■□□□□ 0.38
ABCF1-206ENST00000479542 HSPA8P11142 646 aaKnown RBP17.39■□□□□ 0.37
ABCF1-206ENST00000479542 TRIM28Q13263 835 aaKnown RBP17.39■□□□□ 0.37
ABCF1-206ENST00000479542 CIAPIN1Q6FI81 312 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms