RNA–Protein interactions for RNA: ENST00000479525.6

ECHDC1-216, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,368 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-216ENST00000479525 POTEIP0CG38 1075 aa22.71■■□□□ 1.23
ECHDC1-216ENST00000479525 POTEJP0CG39 1038 aa22.71■■□□□ 1.23
ECHDC1-216ENST00000479525 FKBP4Q02790 459 aaKnown RBP eCLIP22.71■■□□□ 1.23
ECHDC1-216ENST00000479525 DPY19L2Q6NUT2 758 aa22.71■■□□□ 1.23
ECHDC1-216ENST00000479525 RPGRQ92834 1020 aaKnown RBP22.71■■□□□ 1.23
ECHDC1-216ENST00000479525 COL4A5P29400 1685 aa22.71■■□□□ 1.23
ECHDC1-216ENST00000479525 SOGA3Q5TF21 947 aa22.7■■□□□ 1.22
ECHDC1-216ENST00000479525 ZNF541Q9H0D2 1346 aa22.7■■□□□ 1.22
ECHDC1-216ENST00000479525 BABAM1Q9NWV8 329 aa22.7■■□□□ 1.22
ECHDC1-216ENST00000479525 FSTL1Q12841 308 aa22.69■■□□□ 1.22
ECHDC1-216ENST00000479525 CRY2Q49AN0 593 aa22.69■■□□□ 1.22
ECHDC1-216ENST00000479525 HDGFL1Q5TGJ6 251 aa22.69■■□□□ 1.22
ECHDC1-216ENST00000479525 MBIPQ9NS73 344 aa22.69■■□□□ 1.22
ECHDC1-216ENST00000479525 DDX60Q8IY21 1712 aaKnown RBP22.69■■□□□ 1.22
ECHDC1-216ENST00000479525 ALDH1B1P30837 517 aa22.68■■□□□ 1.22
ECHDC1-216ENST00000479525 PPP1R42Q7Z4L9 355 aa22.68■■□□□ 1.22
ECHDC1-216ENST00000479525 DNAJC5GQ8N7S2 189 aa22.68■■□□□ 1.22
ECHDC1-216ENST00000479525 SMC1BQ8NDV3 1235 aa22.68■■□□□ 1.22
ECHDC1-216ENST00000479525 SNED1Q8TER0 1413 aa22.67■■□□□ 1.22
ECHDC1-216ENST00000479525 IBTKQ9P2D0 1353 aaPredicted RBP22.67■■□□□ 1.22
ECHDC1-216ENST00000479525 ELL2O00472 640 aaPredicted RBP22.67■■□□□ 1.22
ECHDC1-216ENST00000479525 HCLS1P14317 486 aaPredicted RBP22.67■■□□□ 1.22
ECHDC1-216ENST00000479525 UTP14AQ9BVJ6 771 aaKnown RBP22.67■■□□□ 1.22
ECHDC1-216ENST00000479525 DDX21Q9NR30 783 aaKnown RBP eCLIP22.67■■□□□ 1.22
ECHDC1-216ENST00000479525 DUSP27Q5VZP5 1158 aa22.65■■□□□ 1.22
ECHDC1-216ENST00000479525 NLRP10Q86W26 655 aa22.65■■□□□ 1.22
ECHDC1-216ENST00000479525 RIC1Q4ADV7 1423 aa22.65■■□□□ 1.22
ECHDC1-216ENST00000479525 SCN4AP35499 1836 aa22.65■■□□□ 1.22
ECHDC1-216ENST00000479525 PPEF1O14829 653 aaPredicted RBP22.64■■□□□ 1.22
ECHDC1-216ENST00000479525 IARSP41252 1262 aaKnown RBP22.64■■□□□ 1.22
ECHDC1-216ENST00000479525 PARP10Q53GL7 1025 aa22.64■■□□□ 1.22
ECHDC1-216ENST00000479525 RBM17Q96I25 401 aaKnown RBP22.64■■□□□ 1.22
ECHDC1-216ENST00000479525 CFAP44Q96MT7 982 aa22.64■■□□□ 1.22
ECHDC1-216ENST00000479525 COL4A1P02462 1669 aa22.64■■□□□ 1.21
ECHDC1-216ENST00000479525 ATP5J2-PTCD1G3V325 749 aa22.63■■□□□ 1.21
ECHDC1-216ENST00000479525 RTL5Q5HYW3 569 aaPredicted RBP22.63■■□□□ 1.21
ECHDC1-216ENST00000479525 RTKN2Q8IZC4 609 aa22.63■■□□□ 1.21
ECHDC1-216ENST00000479525 TCIRG1Q13488 830 aa22.63■■□□□ 1.21
ECHDC1-216ENST00000479525 NLRP3Q96P20 1036 aa22.63■■□□□ 1.21
ECHDC1-216ENST00000479525 TRMT112Q9UI30 125 aaKnown RBP22.63■■□□□ 1.21
ECHDC1-216ENST00000479525 ABCC4O15439 1325 aa22.62■■□□□ 1.21
ECHDC1-216ENST00000479525 HOXA10P31260 410 aaPredicted RBP22.62■■□□□ 1.21
ECHDC1-216ENST00000479525 RNF123Q5XPI4 1314 aa22.61■■□□□ 1.21
ECHDC1-216ENST00000479525 ZNF853P0CG23 659 aa22.61■■□□□ 1.21
ECHDC1-216ENST00000479525 PHAXQ9H814 394 aaKnown RBP22.61■■□□□ 1.21
ECHDC1-216ENST00000479525 LTBP1Q14766 1721 aa22.6■■□□□ 1.21
ECHDC1-216ENST00000479525 EAPPQ56P03 285 aaPredicted RBP22.6■■□□□ 1.21
ECHDC1-216ENST00000479525 CRAMP1Q96RY5 1269 aa22.6■■□□□ 1.21
ECHDC1-216ENST00000479525 HSP90AB3PQ58FF7 597 aa22.59■■□□□ 1.21
ECHDC1-216ENST00000479525 C8orf58Q8NAV2 365 aa22.59■■□□□ 1.21
ECHDC1-216ENST00000479525 KLRG1Q96E93 195 aa22.59■■□□□ 1.21
ECHDC1-216ENST00000479525 GJA3Q9Y6H8 435 aa22.59■■□□□ 1.21
ECHDC1-216ENST00000479525 ANKRD13DQ6ZTN6 518 aa22.58■■□□□ 1.21
ECHDC1-216ENST00000479525 FAM89AQ96GI7 184 aa22.58■■□□□ 1.21
ECHDC1-216ENST00000479525 PSMD1Q99460 953 aa22.58■■□□□ 1.21
ECHDC1-216ENST00000479525 DBF4Q9UBU7 674 aaPredicted RBP22.58■■□□□ 1.21
ECHDC1-216ENST00000479525 PCNTO95613 3336 aa22.58■■□□□ 1.21
ECHDC1-216ENST00000479525 SLC10A5Q5PT55 438 aa22.57■■□□□ 1.2
ECHDC1-216ENST00000479525 PLBD2Q8NHP8 589 aa22.57■■□□□ 1.2
ECHDC1-216ENST00000479525 TSR2Q969E8 191 aaKnown RBP22.57■■□□□ 1.2
ECHDC1-216ENST00000479525 TAF1DQ9H5J8 278 aaPredicted RBP22.57■■□□□ 1.2
ECHDC1-216ENST00000479525 IFT57Q9NWB7 429 aa22.57■■□□□ 1.2
ECHDC1-216ENST00000479525 SH3TC1Q8TE82 1336 aa22.57■■□□□ 1.2
ECHDC1-216ENST00000479525 FZD9O00144 591 aa22.56■■□□□ 1.2
ECHDC1-216ENST00000479525 AOC3Q16853 763 aa22.56■■□□□ 1.2
ECHDC1-216ENST00000479525 CHADLQ6NUI6 762 aa22.56■■□□□ 1.2
ECHDC1-216ENST00000479525 LARGE2Q8N3Y3 721 aa22.56■■□□□ 1.2
ECHDC1-216ENST00000479525 TSPYL6Q8N831 410 aa22.56■■□□□ 1.2
ECHDC1-216ENST00000479525 JARID2Q92833 1246 aaPredicted RBP22.56■■□□□ 1.2
ECHDC1-216ENST00000479525 SALL2Q9Y467 1007 aaPredicted RBP22.56■■□□□ 1.2
ECHDC1-216ENST00000479525 HOXB7P09629 217 aa22.55■■□□□ 1.2
ECHDC1-216ENST00000479525 GNAI1P63096 354 aa22.55■■□□□ 1.2
ECHDC1-216ENST00000479525 JDP2Q8WYK2 163 aa22.55■■□□□ 1.2
ECHDC1-216ENST00000479525 ADAMTSL1Q8N6G6 1762 aa22.55■■□□□ 1.2
ECHDC1-216ENST00000479525 L3MBTL3Q96JM7 780 aaPredicted RBP22.54■■□□□ 1.2
ECHDC1-216ENST00000479525 ISCA1Q9BUE6 129 aa22.54■■□□□ 1.2
ECHDC1-216ENST00000479525 CLEC11AQ9Y240 323 aa22.54■■□□□ 1.2
ECHDC1-216ENST00000479525 PPIP5K2O43314 1243 aa22.53■■□□□ 1.2
ECHDC1-216ENST00000479525 HYPKQ9NX55 129 aa22.53■■□□□ 1.2
ECHDC1-216ENST00000479525 HACL1Q9UJ83 578 aa22.53■■□□□ 1.2
ECHDC1-216ENST00000479525 ATP6V0A2Q9Y487 856 aa22.53■■□□□ 1.2
ECHDC1-216ENST00000479525 IQCA1LA6NCM1 817 aa22.52■■□□□ 1.2
ECHDC1-216ENST00000479525 EPHX2P34913 555 aa22.52■■□□□ 1.2
ECHDC1-216ENST00000479525 CC2D2BQ6DHV5 1058 aa22.52■■□□□ 1.2
ECHDC1-216ENST00000479525 DDX46Q7L014 1031 aaKnown RBP22.52■■□□□ 1.2
ECHDC1-216ENST00000479525 RIC3Q7Z5B4 369 aa22.52■■□□□ 1.2
ECHDC1-216ENST00000479525 MYD88Q99836 296 aa22.52■■□□□ 1.2
ECHDC1-216ENST00000479525 LRRC37AA6NMS7 1700 aa22.52■■□□□ 1.2
ECHDC1-216ENST00000479525 DUOX1Q9NRD9 1551 aa22.52■■□□□ 1.2
ECHDC1-216ENST00000479525 SPEF2Q9C093 1822 aa22.52■■□□□ 1.2
ECHDC1-216ENST00000479525 ZNF316A6NFI3 1004 aaPredicted RBP22.51■■□□□ 1.19
ECHDC1-216ENST00000479525 EIF6P56537 245 aaKnown RBP22.51■■□□□ 1.19
ECHDC1-216ENST00000479525 MRS2Q9HD23 443 aa22.51■■□□□ 1.19
ECHDC1-216ENST00000479525 GRAPQ13588 217 aa22.5■■□□□ 1.19
ECHDC1-216ENST00000479525 GRAPLQ8TC17 118 aaPredicted RBP22.5■■□□□ 1.19
ECHDC1-216ENST00000479525 CELF1Q92879 486 aaKnown RBP22.5■■□□□ 1.19
ECHDC1-216ENST00000479525 MAP1SQ66K74 1059 aaPredicted RBP22.5■■□□□ 1.19
ECHDC1-216ENST00000479525 LDHDQ86WU2 507 aa22.5■■□□□ 1.19
ECHDC1-216ENST00000479525 NIM1KQ8IY84 436 aa22.5■■□□□ 1.19
ECHDC1-216ENST00000479525 MKRN1Q9UHC7 482 aaKnown RBP22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms