RNA–Protein interactions for RNA: ENST00000478914.1

XRCC6-208, Transcript of X-ray repair cross complementing 6, human

TSL 2

Gene XRCC6, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
XRCC6-208	ENST00000478914	CRY2	Q49AN0	593 aa		11.36	□□□□□ -0.59
XRCC6-208	ENST00000478914	HDGFL1	Q5TGJ6	251 aa		11.36	□□□□□ -0.59
XRCC6-208	ENST00000478914	COPS6	Q7L5N1	327 aa		11.36	□□□□□ -0.59
XRCC6-208	ENST00000478914	XAGE3	Q8WTP9	111 aa		11.36	□□□□□ -0.59
XRCC6-208	ENST00000478914	RBM17	Q96I25	401 aa	Known RBP	11.36	□□□□□ -0.59
XRCC6-208	ENST00000478914	CFAP44	Q96MT7	982 aa		11.36	□□□□□ -0.59
XRCC6-208	ENST00000478914	UTP14A	Q9BVJ6	771 aa	Known RBP	11.36	□□□□□ -0.59
XRCC6-208	ENST00000478914	DDX21	Q9NR30	783 aa	Known RBP eCLIP	11.36	□□□□□ -0.59
XRCC6-208	ENST00000478914	APAF1	O14727	1248 aa		11.35	□□□□□ -0.59
XRCC6-208	ENST00000478914	NTSR2	O95665	410 aa		11.35	□□□□□ -0.59
XRCC6-208	ENST00000478914	KRT24	Q2M2I5	525 aa		11.35	□□□□□ -0.59
XRCC6-208	ENST00000478914	CC2D2B	Q6DHV5	1058 aa		11.35	□□□□□ -0.59
XRCC6-208	ENST00000478914	C7orf43	Q8WVR3	580 aa		11.35	□□□□□ -0.59
XRCC6-208	ENST00000478914	NLRP3	Q96P20	1036 aa		11.35	□□□□□ -0.59
XRCC6-208	ENST00000478914	TMX4	Q9H1E5	349 aa	Predicted RBP	11.35	□□□□□ -0.59
XRCC6-208	ENST00000478914	RNF123	Q5XPI4	1314 aa		11.35	□□□□□ -0.59
XRCC6-208	ENST00000478914	GNAI1	P63096	354 aa		11.34	□□□□□ -0.59
XRCC6-208	ENST00000478914	GRIPAP1	Q4V328	841 aa		11.34	□□□□□ -0.59
XRCC6-208	ENST00000478914	LRP10	Q7Z4F1	713 aa		11.34	□□□□□ -0.59
XRCC6-208	ENST00000478914	CHPF2	Q9P2E5	772 aa		11.34	□□□□□ -0.59
XRCC6-208	ENST00000478914	DBF4	Q9UBU7	674 aa	Predicted RBP	11.34	□□□□□ -0.59
XRCC6-208	ENST00000478914	PPEF1	O14829	653 aa	Predicted RBP	11.33	□□□□□ -0.6
XRCC6-208	ENST00000478914	DDN	O94850	711 aa	Predicted RBP	11.33	□□□□□ -0.6
XRCC6-208	ENST00000478914	HOXA10	P31260	410 aa	Predicted RBP	11.33	□□□□□ -0.6
XRCC6-208	ENST00000478914	IARS	P41252	1262 aa	Known RBP	11.33	□□□□□ -0.6
XRCC6-208	ENST00000478914	TCIRG1	Q13488	830 aa		11.33	□□□□□ -0.6
XRCC6-208	ENST00000478914	DUSP27	Q5VZP5	1158 aa		11.33	□□□□□ -0.6
XRCC6-208	ENST00000478914	OLFM4	Q6UX06	510 aa		11.33	□□□□□ -0.6
XRCC6-208	ENST00000478914	SYNE4	Q8N205	404 aa		11.33	□□□□□ -0.6
XRCC6-208	ENST00000478914	CRAMP1	Q96RY5	1269 aa		11.33	□□□□□ -0.6
XRCC6-208	ENST00000478914	ZNF277	Q9NRM2	450 aa	Predicted RBP	11.33	□□□□□ -0.6
XRCC6-208	ENST00000478914	MBIP	Q9NS73	344 aa		11.33	□□□□□ -0.6
XRCC6-208	ENST00000478914	TAF1	P21675	1872 aa		11.32	□□□□□ -0.6
XRCC6-208	ENST00000478914	IQCA1L	A6NCM1	817 aa		11.32	□□□□□ -0.6
XRCC6-208	ENST00000478914	DNAJC5G	Q8N7S2	189 aa		11.32	□□□□□ -0.6
XRCC6-208	ENST00000478914	PLBD2	Q8NHP8	589 aa		11.32	□□□□□ -0.6
XRCC6-208	ENST00000478914	JDP2	Q8WYK2	163 aa		11.32	□□□□□ -0.6
XRCC6-208	ENST00000478914	PSMD1	Q99460	953 aa		11.32	□□□□□ -0.6
XRCC6-208	ENST00000478914	CHMP4A	Q9BY43	222 aa		11.32	□□□□□ -0.6
XRCC6-208	ENST00000478914	IFT57	Q9NWB7	429 aa		11.32	□□□□□ -0.6
XRCC6-208	ENST00000478914	HYPK	Q9NX55	129 aa		11.32	□□□□□ -0.6
XRCC6-208	ENST00000478914	TRMT112	Q9UI30	125 aa	Known RBP	11.32	□□□□□ -0.6
XRCC6-208	ENST00000478914	DDX60	Q8IY21	1712 aa	Known RBP	11.32	□□□□□ -0.6
XRCC6-208	ENST00000478914	TCERG1	O14776	1098 aa	Known RBP	11.31	□□□□□ -0.6
XRCC6-208	ENST00000478914	SLC10A5	Q5PT55	438 aa		11.31	□□□□□ -0.6
XRCC6-208	ENST00000478914	ANKRD13D	Q6ZTN6	518 aa		11.31	□□□□□ -0.6
XRCC6-208	ENST00000478914	NLRP10	Q86W26	655 aa		11.31	□□□□□ -0.6
XRCC6-208	ENST00000478914	SH3TC1	Q8TE82	1336 aa		11.31	□□□□□ -0.6
XRCC6-208	ENST00000478914	ZNF316	A6NFI3	1004 aa	Predicted RBP	11.3	□□□□□ -0.6
XRCC6-208	ENST00000478914	POTEC	B2RU33	542 aa		11.3	□□□□□ -0.6
XRCC6-208	ENST00000478914	ANP32C	O43423	234 aa		11.3	□□□□□ -0.6
XRCC6-208	ENST00000478914	ZNF853	P0CG23	659 aa		11.3	□□□□□ -0.6
XRCC6-208	ENST00000478914	EIF6	P56537	245 aa	Known RBP	11.3	□□□□□ -0.6
XRCC6-208	ENST00000478914	HTRA3	P83110	453 aa		11.3	□□□□□ -0.6
XRCC6-208	ENST00000478914	GOLGA2	Q08379	1002 aa		11.3	□□□□□ -0.6
XRCC6-208	ENST00000478914	DDX46	Q7L014	1031 aa	Known RBP	11.3	□□□□□ -0.6
XRCC6-208	ENST00000478914	CACNA1F	O60840	1977 aa		11.3	□□□□□ -0.6
XRCC6-208	ENST00000478914	ELL2	O00472	640 aa	Predicted RBP	11.29	□□□□□ -0.6
XRCC6-208	ENST00000478914	HCLS1	P14317	486 aa	Predicted RBP	11.29	□□□□□ -0.6
XRCC6-208	ENST00000478914	CHADL	Q6NUI6	762 aa		11.29	□□□□□ -0.6
XRCC6-208	ENST00000478914	C3orf67	Q6ZVT6	689 aa		11.29	□□□□□ -0.6
XRCC6-208	ENST00000478914	RIC3	Q7Z5B4	369 aa		11.29	□□□□□ -0.6
XRCC6-208	ENST00000478914	LARGE2	Q8N3Y3	721 aa		11.29	□□□□□ -0.6
XRCC6-208	ENST00000478914	SUPT20H	Q8NEM7	779 aa		11.29	□□□□□ -0.6
XRCC6-208	ENST00000478914	L3MBTL3	Q96JM7	780 aa	Predicted RBP	11.29	□□□□□ -0.6
XRCC6-208	ENST00000478914	ABCC4	O15439	1325 aa		11.29	□□□□□ -0.6
XRCC6-208	ENST00000478914	ZNF541	Q9H0D2	1346 aa		11.29	□□□□□ -0.6
XRCC6-208	ENST00000478914	SNED1	Q8TER0	1413 aa		11.28	□□□□□ -0.6
XRCC6-208	ENST00000478914	FZD9	O00144	591 aa		11.28	□□□□□ -0.6
XRCC6-208	ENST00000478914	BBOX1	O75936	387 aa		11.28	□□□□□ -0.6
XRCC6-208	ENST00000478914	NIM1K	Q8IY84	436 aa		11.28	□□□□□ -0.6
XRCC6-208	ENST00000478914	MRS2	Q9HD23	443 aa		11.28	□□□□□ -0.6
XRCC6-208	ENST00000478914	HACL1	Q9UJ83	578 aa		11.28	□□□□□ -0.6
XRCC6-208	ENST00000478914	ATP6V0A2	Q9Y487	856 aa		11.28	□□□□□ -0.6
XRCC6-208	ENST00000478914	MYH3	P11055	1940 aa		11.27	□□□□□ -0.6
XRCC6-208	ENST00000478914	ATP5J2-PTCD1	G3V325	749 aa		11.27	□□□□□ -0.61
XRCC6-208	ENST00000478914	PPIP5K2	O43314	1243 aa		11.27	□□□□□ -0.61
XRCC6-208	ENST00000478914	DDX58	O95786	925 aa	Known RBP	11.27	□□□□□ -0.61
XRCC6-208	ENST00000478914	LMOD1	P29536	600 aa	Predicted RBP	11.27	□□□□□ -0.61
XRCC6-208	ENST00000478914	EAPP	Q56P03	285 aa	Predicted RBP	11.27	□□□□□ -0.61
XRCC6-208	ENST00000478914	CCDC30	Q5VVM6	783 aa		11.27	□□□□□ -0.61
XRCC6-208	ENST00000478914	LDHD	Q86WU2	507 aa		11.27	□□□□□ -0.61
XRCC6-208	ENST00000478914	GPC2	Q8N158	579 aa		11.27	□□□□□ -0.61
XRCC6-208	ENST00000478914	ZNF428	Q96B54	188 aa		11.27	□□□□□ -0.61
XRCC6-208	ENST00000478914	KLRG1	Q96E93	195 aa		11.27	□□□□□ -0.61
XRCC6-208	ENST00000478914	ISCA1	Q9BUE6	129 aa		11.27	□□□□□ -0.61
XRCC6-208	ENST00000478914	VPS33B	Q9H267	617 aa		11.27	□□□□□ -0.61
XRCC6-208	ENST00000478914	TAF1D	Q9H5J8	278 aa	Predicted RBP	11.27	□□□□□ -0.61
XRCC6-208	ENST00000478914	GJA3	Q9Y6H8	435 aa		11.27	□□□□□ -0.61
XRCC6-208	ENST00000478914	LRRC37A	A6NMS7	1700 aa		11.26	□□□□□ -0.61
XRCC6-208	ENST00000478914	CAPN15	O75808	1086 aa		11.26	□□□□□ -0.61
XRCC6-208	ENST00000478914	HSP90B1	P14625	803 aa	Known RBP	11.26	□□□□□ -0.61
XRCC6-208	ENST00000478914	GRAP	Q13588	217 aa		11.26	□□□□□ -0.61
XRCC6-208	ENST00000478914	CCDC184	Q52MB2	194 aa		11.26	□□□□□ -0.61
XRCC6-208	ENST00000478914	DPP8	Q6V1X1	898 aa	Predicted RBP	11.26	□□□□□ -0.61
XRCC6-208	ENST00000478914	TMC4	Q7Z404	712 aa		11.26	□□□□□ -0.61
XRCC6-208	ENST00000478914	PNMA8A	Q86V59	439 aa	Predicted RBP	11.26	□□□□□ -0.61
XRCC6-208	ENST00000478914	SP8	Q8IXZ3	490 aa		11.26	□□□□□ -0.61
XRCC6-208	ENST00000478914	MPND	Q8N594	471 aa		11.26	□□□□□ -0.61
XRCC6-208	ENST00000478914	GRAPL	Q8TC17	118 aa	Predicted RBP	11.26	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms