RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 FIGNL1Q6PIW4 674 aa8.95□□□□□ -0.98
CCDC171-207ENST00000478913 GLYCTKQ8IVS8 523 aa8.95□□□□□ -0.98
CCDC171-207ENST00000478913 ABTB2Q8N961 1025 aa8.95□□□□□ -0.98
CCDC171-207ENST00000478913 ZNF837Q96EG3 531 aaPredicted RBP8.95□□□□□ -0.98
CCDC171-207ENST00000478913 IFT43Q96FT9 208 aa8.95□□□□□ -0.98
CCDC171-207ENST00000478913 TUT1Q9H6E5 874 aaKnown RBP8.95□□□□□ -0.98
CCDC171-207ENST00000478913 CEP164Q9UPV0 1460 aa8.95□□□□□ -0.98
CCDC171-207ENST00000478913 ICMTO60725 284 aa8.94□□□□□ -0.98
CCDC171-207ENST00000478913 THBS1P07996 1170 aa8.94□□□□□ -0.98
CCDC171-207ENST00000478913 FKBP4Q02790 459 aaKnown RBP eCLIP8.94□□□□□ -0.98
CCDC171-207ENST00000478913 IER5Q5VY09 327 aa8.94□□□□□ -0.98
CCDC171-207ENST00000478913 BCS1LQ9Y276 419 aa8.94□□□□□ -0.98
CCDC171-207ENST00000478913 MPSTP25325 297 aa8.93□□□□□ -0.98
CCDC171-207ENST00000478913 HSPA2P54652 639 aa8.93□□□□□ -0.98
CCDC171-207ENST00000478913 SAMD5Q5TGI4 173 aa8.93□□□□□ -0.98
CCDC171-207ENST00000478913 SV2AQ7L0J3 742 aa8.93□□□□□ -0.98
CCDC171-207ENST00000478913 VWA5B2Q8N398 1253 aa8.93□□□□□ -0.98
CCDC171-207ENST00000478913 GTPBP3Q969Y2 492 aaKnown RBP8.93□□□□□ -0.98
CCDC171-207ENST00000478913 ZCCHC2Q9C0B9 1178 aaKnown RBP8.93□□□□□ -0.98
CCDC171-207ENST00000478913 CHD1O14646 1710 aa8.92□□□□□ -0.98
CCDC171-207ENST00000478913 SOWAHDA6NJG2 315 aa8.92□□□□□ -0.98
CCDC171-207ENST00000478913 ATXN7O15265 892 aaPredicted RBP8.92□□□□□ -0.98
CCDC171-207ENST00000478913 FAM13AO94988 1023 aa8.92□□□□□ -0.98
CCDC171-207ENST00000478913 VSIG8P0DPA2 414 aa8.92□□□□□ -0.98
CCDC171-207ENST00000478913 FOXR1Q6PIV2 292 aa8.92□□□□□ -0.98
CCDC171-207ENST00000478913 BTLAQ7Z6A9 289 aa8.92□□□□□ -0.98
CCDC171-207ENST00000478913 TREML1Q86YW5 311 aa8.92□□□□□ -0.98
CCDC171-207ENST00000478913 ETFBKMTQ8IXQ9 262 aa8.92□□□□□ -0.98
CCDC171-207ENST00000478913 CEP63Q96MT8 703 aa8.92□□□□□ -0.98
CCDC171-207ENST00000478913 PCDHGC4Q9Y5F7 938 aa8.92□□□□□ -0.98
CCDC171-207ENST00000478913 SRCAPQ6ZRS2 3230 aa8.91□□□□□ -0.98
CCDC171-207ENST00000478913 IDH3AP50213 366 aa8.91□□□□□ -0.98
CCDC171-207ENST00000478913 XP32Q5T750 250 aa8.91□□□□□ -0.98
CCDC171-207ENST00000478913 NANOS1Q8WY41 292 aaKnown RBP8.91□□□□□ -0.98
CCDC171-207ENST00000478913 TRERF1Q96PN7 1200 aa8.91□□□□□ -0.98
CCDC171-207ENST00000478913 DCDC2BA2VCK2 349 aa8.9□□□□□ -0.98
CCDC171-207ENST00000478913 MICAL2O94851 1124 aa8.9□□□□□ -0.98
CCDC171-207ENST00000478913 FAM157BP0CG42 384 aa8.9□□□□□ -0.98
CCDC171-207ENST00000478913 RASSF7Q02833 373 aa8.9□□□□□ -0.98
CCDC171-207ENST00000478913 TYRO3Q06418 890 aa8.9□□□□□ -0.98
CCDC171-207ENST00000478913 UBAP2LQ14157 1087 aaKnown RBP8.9□□□□□ -0.98
CCDC171-207ENST00000478913 NOM1Q5C9Z4 860 aaKnown RBP8.9□□□□□ -0.98
CCDC171-207ENST00000478913 FAM26DQ5JW98 314 aa8.9□□□□□ -0.98
CCDC171-207ENST00000478913 TMEM151AQ8N4L1 468 aa8.9□□□□□ -0.98
CCDC171-207ENST00000478913 BIN2Q9UBW5 565 aaPredicted RBP8.9□□□□□ -0.98
CCDC171-207ENST00000478913 PHF24Q9UPV7 400 aa8.9□□□□□ -0.98
CCDC171-207ENST00000478913 HMGXB3Q12766 1538 aa8.9□□□□□ -0.99
CCDC171-207ENST00000478913 GPR25O00155 361 aa8.89□□□□□ -0.99
CCDC171-207ENST00000478913 KHNYNO15037 678 aaKnown RBP8.89□□□□□ -0.99
CCDC171-207ENST00000478913 GDF11O95390 407 aa8.89□□□□□ -0.99
CCDC171-207ENST00000478913 NPR3P17342 541 aa8.89□□□□□ -0.99
CCDC171-207ENST00000478913 ZAP70P43403 619 aa8.89□□□□□ -0.99
CCDC171-207ENST00000478913 EIF1AXP47813 144 aaKnown RBP8.89□□□□□ -0.99
CCDC171-207ENST00000478913 ARSDP51689 593 aa8.89□□□□□ -0.99
CCDC171-207ENST00000478913 TRIM26Q12899 539 aaPredicted RBP8.89□□□□□ -0.99
CCDC171-207ENST00000478913 ALKBH2Q6NS38 261 aa8.89□□□□□ -0.99
CCDC171-207ENST00000478913 GZF1Q9H116 711 aaPredicted RBP8.89□□□□□ -0.99
CCDC171-207ENST00000478913 BRD7Q9NPI1 651 aa8.89□□□□□ -0.99
CCDC171-207ENST00000478913 DMGDHQ9UI17 866 aaKnown RBP8.89□□□□□ -0.99
CCDC171-207ENST00000478913 ZBTB39O15060 712 aa8.88□□□□□ -0.99
CCDC171-207ENST00000478913 BNIP3LO60238 219 aa8.88□□□□□ -0.99
CCDC171-207ENST00000478913 EPB42P16452 691 aa8.88□□□□□ -0.99
CCDC171-207ENST00000478913 AAMPQ13685 434 aa8.88□□□□□ -0.99
CCDC171-207ENST00000478913 ABHD17AQ96GS6 310 aa8.88□□□□□ -0.99
CCDC171-207ENST00000478913 FAM13BQ9NYF5 915 aa8.88□□□□□ -0.99
CCDC171-207ENST00000478913 ATXN7L1Q9ULK2 861 aaPredicted RBP8.88□□□□□ -0.99
CCDC171-207ENST00000478913 MAPTP10636 758 aaKnown RBP8.87□□□□□ -0.99
CCDC171-207ENST00000478913 SND1Q7KZF4 910 aaKnown RBP eCLIP8.87□□□□□ -0.99
CCDC171-207ENST00000478913 ATCAYQ86WG3 371 aa8.87□□□□□ -0.99
CCDC171-207ENST00000478913 NDFIP2Q9NV92 336 aa8.87□□□□□ -0.99
CCDC171-207ENST00000478913 ABCC10Q5T3U5 1492 aa8.86□□□□□ -0.99
CCDC171-207ENST00000478913 EFSO43281 561 aa8.86□□□□□ -0.99
CCDC171-207ENST00000478913 INPP5BP32019 993 aa8.86□□□□□ -0.99
CCDC171-207ENST00000478913 TNP2Q05952 138 aa8.86□□□□□ -0.99
CCDC171-207ENST00000478913 CFHR5Q9BXR6 569 aa8.86□□□□□ -0.99
CCDC171-207ENST00000478913 KRTAP4-8Q9BYQ9 185 aa8.86□□□□□ -0.99
CCDC171-207ENST00000478913 BAZ1BQ9UIG0 1483 aaKnown RBP8.85□□□□□ -0.99
CCDC171-207ENST00000478913 FGFR3P22607 806 aa8.85□□□□□ -0.99
CCDC171-207ENST00000478913 ARHGAP4P98171 946 aa8.85□□□□□ -0.99
CCDC171-207ENST00000478913 LAMC2Q13753 1193 aa8.85□□□□□ -0.99
CCDC171-207ENST00000478913 RGL4Q8IZJ4 473 aa8.85□□□□□ -0.99
CCDC171-207ENST00000478913 GPR152Q8TDT2 470 aa8.85□□□□□ -0.99
CCDC171-207ENST00000478913 URB2Q14146 1524 aaKnown RBP8.85□□□□□ -0.99
CCDC171-207ENST00000478913 SMARCA4P51532 1647 aa8.84□□□□□ -0.99
CCDC171-207ENST00000478913 OPLAHO14841 1288 aa8.84□□□□□ -0.99
CCDC171-207ENST00000478913 ECM1Q16610 540 aa8.84□□□□□ -0.99
CCDC171-207ENST00000478913 PIK3R5Q8WYR1 880 aa8.84□□□□□ -0.99
CCDC171-207ENST00000478913 MARK1Q9P0L2 795 aa8.84□□□□□ -0.99
CCDC171-207ENST00000478913 KCNH4Q9UQ05 1017 aa8.84□□□□□ -0.99
CCDC171-207ENST00000478913 FANCD2Q9BXW9 1451 aa8.83□□□□□ -1
CCDC171-207ENST00000478913 CD33P20138 364 aa8.83□□□□□ -1
CCDC171-207ENST00000478913 KRT76Q01546 638 aa8.83□□□□□ -1
CCDC171-207ENST00000478913 DNM1Q05193 864 aaKnown RBP8.83□□□□□ -1
CCDC171-207ENST00000478913 SFSWAPQ12872 951 aaKnown RBP8.83□□□□□ -1
CCDC171-207ENST00000478913 CMTR1Q8N1G2 835 aaKnown RBP8.83□□□□□ -1
CCDC171-207ENST00000478913 GPR161Q8N6U8 529 aaKnown RBP8.83□□□□□ -1
CCDC171-207ENST00000478913 EDEM1Q92611 657 aa8.83□□□□□ -1
CCDC171-207ENST00000478913 STRN4Q9NRL3 753 aa8.83□□□□□ -1
CCDC171-207ENST00000478913 USP20Q9Y2K6 914 aa8.83□□□□□ -1
CCDC171-207ENST00000478913 RTCBQ9Y3I0 505 aaKnown RBP8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms