RNA–Protein interactions for RNA: ENST00000478702.5

GARNL3-215, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-215ENST00000478702 HACL1Q9UJ83 578 aa20.68■□□□□ 0.9
GARNL3-215ENST00000478702 RNF123Q5XPI4 1314 aa20.68■□□□□ 0.9
GARNL3-215ENST00000478702 LAMB2P55268 1798 aa20.67■□□□□ 0.9
GARNL3-215ENST00000478702 ALDH1B1P30837 517 aa20.67■□□□□ 0.9
GARNL3-215ENST00000478702 EPHX2P34913 555 aa20.67■□□□□ 0.9
GARNL3-215ENST00000478702 CRY2Q49AN0 593 aa20.67■□□□□ 0.9
GARNL3-215ENST00000478702 TMEM88BA6NKF7 163 aa20.66■□□□□ 0.9
GARNL3-215ENST00000478702 VEGFBP49765 207 aa20.66■□□□□ 0.9
GARNL3-215ENST00000478702 EIF4A1P60842 406 aaKnown RBP20.66■□□□□ 0.9
GARNL3-215ENST00000478702 NEUROD2Q15784 382 aa20.66■□□□□ 0.9
GARNL3-215ENST00000478702 NUTM1Q86Y26 1132 aa20.66■□□□□ 0.9
GARNL3-215ENST00000478702 TRIM35Q9UPQ4 493 aa20.66■□□□□ 0.9
GARNL3-215ENST00000478702 NGEFQ8N5V2 710 aa20.65■□□□□ 0.9
GARNL3-215ENST00000478702 BABAM1Q9NWV8 329 aa20.65■□□□□ 0.9
GARNL3-215ENST00000478702 TSPYL4Q9UJ04 414 aa20.65■□□□□ 0.9
GARNL3-215ENST00000478702 ANKRD36CQ5JPF3 1778 aa20.64■□□□□ 0.9
GARNL3-215ENST00000478702 RIC1Q4ADV7 1423 aa20.64■□□□□ 0.89
GARNL3-215ENST00000478702 GTF2E1P29083 439 aaPredicted RBP20.64■□□□□ 0.89
GARNL3-215ENST00000478702 TTLL7Q6ZT98 887 aa20.64■□□□□ 0.89
GARNL3-215ENST00000478702 SLC51AQ86UW1 340 aa20.64■□□□□ 0.89
GARNL3-215ENST00000478702 PSMD1Q99460 953 aa20.64■□□□□ 0.89
GARNL3-215ENST00000478702 CLEC11AQ9Y240 323 aa20.64■□□□□ 0.89
GARNL3-215ENST00000478702 MAP3K15Q6ZN16 1313 aa20.63■□□□□ 0.89
GARNL3-215ENST00000478702 UBN2Q6ZU65 1347 aa20.63■□□□□ 0.89
GARNL3-215ENST00000478702 ERVV-1B6SEH8 477 aa20.63■□□□□ 0.89
GARNL3-215ENST00000478702 MAP1SQ66K74 1059 aaPredicted RBP20.63■□□□□ 0.89
GARNL3-215ENST00000478702 GPC2Q8N158 579 aa20.63■□□□□ 0.89
GARNL3-215ENST00000478702 THSD7BQ9C0I4 1608 aa20.63■□□□□ 0.89
GARNL3-215ENST00000478702 PNMA8AQ86V59 439 aaPredicted RBP20.62■□□□□ 0.89
GARNL3-215ENST00000478702 CNTROBQ8N137 903 aa20.62■□□□□ 0.89
GARNL3-215ENST00000478702 NYXQ9GZU5 481 aa20.62■□□□□ 0.89
GARNL3-215ENST00000478702 PRDM10Q9NQV6 1147 aa20.62■□□□□ 0.89
GARNL3-215ENST00000478702 IBTKQ9P2D0 1353 aaPredicted RBP20.61■□□□□ 0.89
GARNL3-215ENST00000478702 TAF1P21675 1872 aa20.61■□□□□ 0.89
GARNL3-215ENST00000478702 MRS2Q9HD23 443 aa20.61■□□□□ 0.89
GARNL3-215ENST00000478702 RASSF10A6NK89 507 aa20.6■□□□□ 0.89
GARNL3-215ENST00000478702 APAF1O14727 1248 aa20.6■□□□□ 0.89
GARNL3-215ENST00000478702 GPTP24298 496 aa20.6■□□□□ 0.89
GARNL3-215ENST00000478702 HOXA10P31260 410 aaPredicted RBP20.6■□□□□ 0.89
GARNL3-215ENST00000478702 SUSD4Q5VX71 490 aa20.6■□□□□ 0.89
GARNL3-215ENST00000478702 WBP1LQ9NX94 342 aa20.6■□□□□ 0.89
GARNL3-215ENST00000478702 MYL6BP14649 208 aa20.59■□□□□ 0.89
GARNL3-215ENST00000478702 CTCFP49711 727 aaPredicted RBP20.59■□□□□ 0.89
GARNL3-215ENST00000478702 CC2D2BQ6DHV5 1058 aa20.59■□□□□ 0.89
GARNL3-215ENST00000478702 JDP2Q8WYK2 163 aa20.59■□□□□ 0.89
GARNL3-215ENST00000478702 ZBTB3Q9H5J0 574 aa20.59■□□□□ 0.89
GARNL3-215ENST00000478702 ERBB4Q15303 1308 aa20.58■□□□□ 0.89
GARNL3-215ENST00000478702 CHL1O00533 1208 aa20.58■□□□□ 0.89
GARNL3-215ENST00000478702 DEFB115Q30KQ5 88 aa20.58■□□□□ 0.89
GARNL3-215ENST00000478702 C3orf67Q6ZVT6 689 aa20.58■□□□□ 0.89
GARNL3-215ENST00000478702 ZNF34Q8IZ26 560 aa20.58■□□□□ 0.89
GARNL3-215ENST00000478702 GJA3Q9Y6H8 435 aa20.58■□□□□ 0.89
GARNL3-215ENST00000478702 NTSR2O95665 410 aa20.57■□□□□ 0.88
GARNL3-215ENST00000478702 SCNN1DP51172 638 aa20.57■□□□□ 0.88
GARNL3-215ENST00000478702 FMR1Q06787 632 aaKnown RBP eCLIP20.57■□□□□ 0.88
GARNL3-215ENST00000478702 KIF6Q6ZMV9 814 aa20.57■□□□□ 0.88
GARNL3-215ENST00000478702 RPGRQ92834 1020 aaKnown RBP20.57■□□□□ 0.88
GARNL3-215ENST00000478702 AIDAQ96BJ3 306 aa20.57■□□□□ 0.88
GARNL3-215ENST00000478702 LBX1P52954 281 aa20.56■□□□□ 0.88
GARNL3-215ENST00000478702 EIF6P56537 245 aaKnown RBP20.56■□□□□ 0.88
GARNL3-215ENST00000478702 CRAMP1Q96RY5 1269 aa20.56■□□□□ 0.88
GARNL3-215ENST00000478702 WDR33Q9C0J8 1336 aaKnown RBP20.55■□□□□ 0.88
GARNL3-215ENST00000478702 EPS15P42566 896 aa20.55■□□□□ 0.88
GARNL3-215ENST00000478702 GIGYF2Q6Y7W6 1299 aaKnown RBP20.55■□□□□ 0.88
GARNL3-215ENST00000478702 LRP10Q7Z4F1 713 aa20.55■□□□□ 0.88
GARNL3-215ENST00000478702 DDX21Q9NR30 783 aaKnown RBP eCLIP20.55■□□□□ 0.88
GARNL3-215ENST00000478702 TCERG1O14776 1098 aaKnown RBP20.54■□□□□ 0.88
GARNL3-215ENST00000478702 PPEF1O14829 653 aaPredicted RBP20.54■□□□□ 0.88
GARNL3-215ENST00000478702 HSPA8P11142 646 aaKnown RBP20.54■□□□□ 0.88
GARNL3-215ENST00000478702 LARGE2Q8N3Y3 721 aa20.54■□□□□ 0.88
GARNL3-215ENST00000478702 RBM17Q96I25 401 aaKnown RBP20.54■□□□□ 0.88
GARNL3-215ENST00000478702 CFAP44Q96MT7 982 aa20.54■□□□□ 0.88
GARNL3-215ENST00000478702 LAS1LQ9Y4W2 734 aaKnown RBP20.54■□□□□ 0.88
GARNL3-215ENST00000478702 GRIPAP1Q4V328 841 aa20.53■□□□□ 0.88
GARNL3-215ENST00000478702 ABT1Q9ULW3 272 aaKnown RBP20.53■□□□□ 0.88
GARNL3-215ENST00000478702 ZNF853P0CG23 659 aa20.52■□□□□ 0.88
GARNL3-215ENST00000478702 LMOD1P29536 600 aaPredicted RBP20.52■□□□□ 0.88
GARNL3-215ENST00000478702 CALD1Q05682 793 aaKnown RBP20.52■□□□□ 0.88
GARNL3-215ENST00000478702 PDIA6Q15084 440 aa20.52■□□□□ 0.88
GARNL3-215ENST00000478702 KRT24Q2M2I5 525 aa20.52■□□□□ 0.88
GARNL3-215ENST00000478702 IFT57Q9NWB7 429 aa20.52■□□□□ 0.88
GARNL3-215ENST00000478702 DDX60Q8IY21 1712 aaKnown RBP20.51■□□□□ 0.87
GARNL3-215ENST00000478702 MBIPQ9NS73 344 aa20.51■□□□□ 0.87
GARNL3-215ENST00000478702 POLR2AP24928 1970 aaKnown RBP20.5■□□□□ 0.87
GARNL3-215ENST00000478702 HOXB7P09629 217 aa20.5■□□□□ 0.87
GARNL3-215ENST00000478702 AOC3Q16853 763 aa20.5■□□□□ 0.87
GARNL3-215ENST00000478702 CST9Q5W186 159 aa20.5■□□□□ 0.87
GARNL3-215ENST00000478702 PPP1R42Q7Z4L9 355 aa20.5■□□□□ 0.87
GARNL3-215ENST00000478702 LRRC37AA6NMS7 1700 aa20.5■□□□□ 0.87
GARNL3-215ENST00000478702 TRAF5O00463 557 aa20.49■□□□□ 0.87
GARNL3-215ENST00000478702 PPIP5K2O43314 1243 aa20.49■□□□□ 0.87
GARNL3-215ENST00000478702 EIF2S2P20042 333 aaKnown RBP20.49■□□□□ 0.87
GARNL3-215ENST00000478702 GNAI1P63096 354 aa20.49■□□□□ 0.87
GARNL3-215ENST00000478702 CCDC27Q2M243 656 aa20.49■□□□□ 0.87
GARNL3-215ENST00000478702 PROSER3Q2NL68 480 aa20.49■□□□□ 0.87
GARNL3-215ENST00000478702 PARP10Q53GL7 1025 aa20.49■□□□□ 0.87
GARNL3-215ENST00000478702 SLC10A5Q5PT55 438 aa20.49■□□□□ 0.87
GARNL3-215ENST00000478702 USP50Q70EL3 339 aaPredicted RBP20.49■□□□□ 0.87
GARNL3-215ENST00000478702 NIM1KQ8IY84 436 aa20.49■□□□□ 0.87
GARNL3-215ENST00000478702 ATP6V0A2Q9Y487 856 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 119.5 ms