RNA–Protein interactions for RNA: ENST00000478459.5

EPHB4-205, Transcript of EPH receptor B4, humanhuman

TSL 2

Gene EPHB4, Length 965 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-205ENST00000478459 PPP1R42Q7Z4L9 355 aa24.74■■□□□ 1.55
EPHB4-205ENST00000478459 C16orf71Q8IYS4 520 aaPredicted RBP24.74■■□□□ 1.55
EPHB4-205ENST00000478459 UTP14AQ9BVJ6 771 aaKnown RBP24.74■■□□□ 1.55
EPHB4-205ENST00000478459 LAMB2P55268 1798 aa24.74■■□□□ 1.55
EPHB4-205ENST00000478459 CCDC93Q567U6 631 aa24.73■■□□□ 1.55
EPHB4-205ENST00000478459 C7orf43Q8WVR3 580 aa24.73■■□□□ 1.55
EPHB4-205ENST00000478459 DBF4Q9UBU7 674 aaPredicted RBP24.73■■□□□ 1.55
EPHB4-205ENST00000478459 ATP5J2-PTCD1G3V325 749 aa24.72■■□□□ 1.55
EPHB4-205ENST00000478459 HCLS1P14317 486 aaPredicted RBP24.72■■□□□ 1.55
EPHB4-205ENST00000478459 CALD1Q05682 793 aaKnown RBP24.72■■□□□ 1.55
EPHB4-205ENST00000478459 NLRP10Q86W26 655 aa24.72■■□□□ 1.55
EPHB4-205ENST00000478459 ZNF277Q9NRM2 450 aaPredicted RBP24.72■■□□□ 1.55
EPHB4-205ENST00000478459 TAF1P21675 1872 aa24.72■■□□□ 1.55
EPHB4-205ENST00000478459 ALDH1B1P30837 517 aa24.71■■□□□ 1.55
EPHB4-205ENST00000478459 TCIRG1Q13488 830 aa24.71■■□□□ 1.55
EPHB4-205ENST00000478459 PARP10Q53GL7 1025 aa24.71■■□□□ 1.55
EPHB4-205ENST00000478459 RTL5Q5HYW3 569 aaPredicted RBP24.71■■□□□ 1.55
EPHB4-205ENST00000478459 FAM9BQ8IZU0 186 aa24.71■■□□□ 1.55
EPHB4-205ENST00000478459 TSPYL6Q8N831 410 aa24.71■■□□□ 1.55
EPHB4-205ENST00000478459 PHAXQ9H814 394 aaKnown RBP24.71■■□□□ 1.55
EPHB4-205ENST00000478459 TOMM70O94826 608 aa24.7■■□□□ 1.54
EPHB4-205ENST00000478459 CRY2Q49AN0 593 aa24.7■■□□□ 1.54
EPHB4-205ENST00000478459 ANKRD13DQ6ZTN6 518 aa24.7■■□□□ 1.54
EPHB4-205ENST00000478459 TRMT112Q9UI30 125 aaKnown RBP24.7■■□□□ 1.54
EPHB4-205ENST00000478459 IBTKQ9P2D0 1353 aaPredicted RBP24.69■■□□□ 1.54
EPHB4-205ENST00000478459 GLTPD2A6NH11 291 aa24.69■■□□□ 1.54
EPHB4-205ENST00000478459 HOXB7P09629 217 aa24.69■■□□□ 1.54
EPHB4-205ENST00000478459 SOGA3Q5TF21 947 aa24.69■■□□□ 1.54
EPHB4-205ENST00000478459 HSP90AB3PQ58FF7 597 aa24.68■■□□□ 1.54
EPHB4-205ENST00000478459 PLBD2Q8NHP8 589 aa24.68■■□□□ 1.54
EPHB4-205ENST00000478459 NLRP3Q96P20 1036 aa24.68■■□□□ 1.54
EPHB4-205ENST00000478459 HYPKQ9NX55 129 aa24.68■■□□□ 1.54
EPHB4-205ENST00000478459 HSPA6P17066 643 aa24.67■■□□□ 1.54
EPHB4-205ENST00000478459 WWC1Q8IX03 1113 aa24.67■■□□□ 1.54
EPHB4-205ENST00000478459 RBM17Q96I25 401 aaKnown RBP24.67■■□□□ 1.54
EPHB4-205ENST00000478459 LTBP3Q9NS15 1303 aa24.66■■□□□ 1.54
EPHB4-205ENST00000478459 DDNO94850 711 aaPredicted RBP24.66■■□□□ 1.54
EPHB4-205ENST00000478459 FKBP4Q02790 459 aaKnown RBP eCLIP24.66■■□□□ 1.54
EPHB4-205ENST00000478459 RIC3Q7Z5B4 369 aa24.66■■□□□ 1.54
EPHB4-205ENST00000478459 PPEF1O14829 653 aaPredicted RBP24.65■■□□□ 1.54
EPHB4-205ENST00000478459 DDX60Q8IY21 1712 aaKnown RBP24.65■■□□□ 1.54
EPHB4-205ENST00000478459 FAM89AQ96GI7 184 aa24.65■■□□□ 1.54
EPHB4-205ENST00000478459 ZC3H4Q9UPT8 1303 aaKnown RBP24.64■■□□□ 1.54
EPHB4-205ENST00000478459 RIC1Q4ADV7 1423 aa24.64■■□□□ 1.54
EPHB4-205ENST00000478459 HOXA10P31260 410 aaPredicted RBP24.64■■□□□ 1.54
EPHB4-205ENST00000478459 DPY19L2Q6NUT2 758 aa24.64■■□□□ 1.54
EPHB4-205ENST00000478459 ABCC4O15439 1325 aa24.63■■□□□ 1.53
EPHB4-205ENST00000478459 HTRA3P83110 453 aa24.63■■□□□ 1.53
EPHB4-205ENST00000478459 RTKN2Q8IZC4 609 aa24.63■■□□□ 1.53
EPHB4-205ENST00000478459 JARID2Q92833 1246 aaPredicted RBP24.63■■□□□ 1.53
EPHB4-205ENST00000478459 MYD88Q99836 296 aa24.63■■□□□ 1.53
EPHB4-205ENST00000478459 SH3TC1Q8TE82 1336 aa24.62■■□□□ 1.53
EPHB4-205ENST00000478459 GOLGA2Q08379 1002 aa24.62■■□□□ 1.53
EPHB4-205ENST00000478459 SLC10A5Q5PT55 438 aa24.62■■□□□ 1.53
EPHB4-205ENST00000478459 ISCA1Q9BUE6 129 aa24.62■■□□□ 1.53
EPHB4-205ENST00000478459 ZNF541Q9H0D2 1346 aa24.61■■□□□ 1.53
EPHB4-205ENST00000478459 POTECB2RU33 542 aa24.61■■□□□ 1.53
EPHB4-205ENST00000478459 VEGFAP15692 232 aaPredicted RBP24.61■■□□□ 1.53
EPHB4-205ENST00000478459 IARSP41252 1262 aaKnown RBP24.61■■□□□ 1.53
EPHB4-205ENST00000478459 RBM46Q8TBY0 533 aaKnown RBP24.61■■□□□ 1.53
EPHB4-205ENST00000478459 CRAMP1Q96RY5 1269 aa24.61■■□□□ 1.53
EPHB4-205ENST00000478459 CCDC27Q2M243 656 aa24.6■■□□□ 1.53
EPHB4-205ENST00000478459 WDR90Q96KV7 1748 aa24.6■■□□□ 1.53
EPHB4-205ENST00000478459 CCDC30Q5VVM6 783 aa24.59■■□□□ 1.53
EPHB4-205ENST00000478459 COL4A5P29400 1685 aa24.59■■□□□ 1.53
EPHB4-205ENST00000478459 TWISTNBQ3B726 338 aaPredicted RBP24.58■■□□□ 1.53
EPHB4-205ENST00000478459 SNED1Q8TER0 1413 aa24.58■■□□□ 1.53
EPHB4-205ENST00000478459 COL4A1P02462 1669 aa24.57■■□□□ 1.52
EPHB4-205ENST00000478459 G2E3Q7L622 706 aa24.57■■□□□ 1.52
EPHB4-205ENST00000478459 FANCIQ9NVI1 1328 aa24.57■■□□□ 1.52
EPHB4-205ENST00000478459 POTEIP0CG38 1075 aa24.56■■□□□ 1.52
EPHB4-205ENST00000478459 POTEJP0CG39 1038 aa24.56■■□□□ 1.52
EPHB4-205ENST00000478459 DDX46Q7L014 1031 aaKnown RBP24.56■■□□□ 1.52
EPHB4-205ENST00000478459 RNF123Q5XPI4 1314 aa24.56■■□□□ 1.52
EPHB4-205ENST00000478459 CCDC85AQ96PX6 553 aaPredicted RBP24.55■■□□□ 1.52
EPHB4-205ENST00000478459 SPINK5Q9NQ38 1064 aaPredicted RBP24.55■■□□□ 1.52
EPHB4-205ENST00000478459 MAP3K2Q9Y2U5 619 aa24.55■■□□□ 1.52
EPHB4-205ENST00000478459 IRS4O14654 1257 aaPredicted RBP24.54■■□□□ 1.52
EPHB4-205ENST00000478459 LARGE2Q8N3Y3 721 aa24.54■■□□□ 1.52
EPHB4-205ENST00000478459 PSMD1Q99460 953 aa24.54■■□□□ 1.52
EPHB4-205ENST00000478459 STK31Q9BXU1 1019 aa24.54■■□□□ 1.52
EPHB4-205ENST00000478459 TMX4Q9H1E5 349 aaPredicted RBP24.54■■□□□ 1.52
EPHB4-205ENST00000478459 ATP6V0A2Q9Y487 856 aa24.54■■□□□ 1.52
EPHB4-205ENST00000478459 GJA3Q9Y6H8 435 aa24.54■■□□□ 1.52
EPHB4-205ENST00000478459 EXOSC9Q06265 439 aaKnown RBP24.53■■□□□ 1.52
EPHB4-205ENST00000478459 AOC3Q16853 763 aa24.53■■□□□ 1.52
EPHB4-205ENST00000478459 CC2D2BQ6DHV5 1058 aa24.53■■□□□ 1.52
EPHB4-205ENST00000478459 SMC1BQ8NDV3 1235 aa24.53■■□□□ 1.52
EPHB4-205ENST00000478459 PI4KAP2A4QPH2 592 aa24.52■■□□□ 1.52
EPHB4-205ENST00000478459 APLP1P51693 650 aa24.52■■□□□ 1.52
EPHB4-205ENST00000478459 PI4KAP1Q8N8J0 262 aa24.52■■□□□ 1.52
EPHB4-205ENST00000478459 JDP2Q8WYK2 163 aa24.52■■□□□ 1.52
EPHB4-205ENST00000478459 IL16Q14005 1332 aa24.52■■□□□ 1.52
EPHB4-205ENST00000478459 PPIP5K2O43314 1243 aa24.51■■□□□ 1.51
EPHB4-205ENST00000478459 DDX58O95786 925 aaKnown RBP24.51■■□□□ 1.51
EPHB4-205ENST00000478459 SLC4A2P04920 1241 aa24.51■■□□□ 1.51
EPHB4-205ENST00000478459 FSTL1Q12841 308 aa24.51■■□□□ 1.51
EPHB4-205ENST00000478459 GRAPQ13588 217 aa24.51■■□□□ 1.51
EPHB4-205ENST00000478459 GRAPLQ8TC17 118 aaPredicted RBP24.51■■□□□ 1.51
EPHB4-205ENST00000478459 CELF1Q92879 486 aaKnown RBP24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms