RNA–Protein interactions for RNA: ENST00000477413.1

CNIH4-208, Transcript of cornichon family AMPA receptor auxiliary protein 4, humanhuman

TSL 5

Gene CNIH4, Length 820 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4-208ENST00000477413 HOXA10P31260 410 aaPredicted RBP29.4■■■□□ 2.3
CNIH4-208ENST00000477413 NECTIN2Q92692 538 aa29.4■■■□□ 2.3
CNIH4-208ENST00000477413 NMRK2Q9NPI5 230 aa29.4■■■□□ 2.3
CNIH4-208ENST00000477413 ALDH1B1P30837 517 aa29.39■■■□□ 2.3
CNIH4-208ENST00000477413 MRS2Q9HD23 443 aa29.39■■■□□ 2.3
CNIH4-208ENST00000477413 WDR90Q96KV7 1748 aa29.39■■■□□ 2.3
CNIH4-208ENST00000477413 CCDC93Q567U6 631 aa29.38■■■□□ 2.29
CNIH4-208ENST00000477413 SLC10A5Q5PT55 438 aa29.38■■■□□ 2.29
CNIH4-208ENST00000477413 HYPKQ9NX55 129 aa29.38■■■□□ 2.29
CNIH4-208ENST00000477413 TCIRG1Q13488 830 aa29.37■■■□□ 2.29
CNIH4-208ENST00000477413 PLBD2Q8NHP8 589 aa29.37■■■□□ 2.29
CNIH4-208ENST00000477413 SENP3-EIF4A1A0A087X0R7 540 aa29.36■■■□□ 2.29
CNIH4-208ENST00000477413 TOMM70O94826 608 aa29.36■■■□□ 2.29
CNIH4-208ENST00000477413 NLRP10Q86W26 655 aa29.36■■■□□ 2.29
CNIH4-208ENST00000477413 UTP14AQ9BVJ6 771 aaKnown RBP29.36■■■□□ 2.29
CNIH4-208ENST00000477413 IL16Q14005 1332 aa29.36■■■□□ 2.29
CNIH4-208ENST00000477413 GLTPD2A6NH11 291 aa29.35■■■□□ 2.29
CNIH4-208ENST00000477413 WWC1Q8IX03 1113 aa29.35■■■□□ 2.29
CNIH4-208ENST00000477413 AIMP1Q12904 312 aaKnown RBP29.34■■■□□ 2.29
CNIH4-208ENST00000477413 ZNF219Q9P2Y4 722 aaPredicted RBP29.34■■■□□ 2.29
CNIH4-208ENST00000477413 DDX60Q8IY21 1712 aaKnown RBP29.34■■■□□ 2.29
CNIH4-208ENST00000477413 CRAMP1Q96RY5 1269 aa29.33■■■□□ 2.29
CNIH4-208ENST00000477413 CHMP4AQ9BY43 222 aa29.33■■■□□ 2.29
CNIH4-208ENST00000477413 FKBP4Q02790 459 aaKnown RBP eCLIP29.32■■■□□ 2.28
CNIH4-208ENST00000477413 ANKRD13DQ6ZTN6 518 aa29.32■■■□□ 2.28
CNIH4-208ENST00000477413 RTKN2Q8IZC4 609 aa29.32■■■□□ 2.28
CNIH4-208ENST00000477413 CC2D2BQ6DHV5 1058 aa29.31■■■□□ 2.28
CNIH4-208ENST00000477413 RBM46Q8TBY0 533 aaKnown RBP29.31■■■□□ 2.28
CNIH4-208ENST00000477413 RPGRQ92834 1020 aaKnown RBP29.31■■■□□ 2.28
CNIH4-208ENST00000477413 HSPA6P17066 643 aa29.3■■■□□ 2.28
CNIH4-208ENST00000477413 C3orf67Q6ZVT6 689 aa29.3■■■□□ 2.28
CNIH4-208ENST00000477413 C8orf58Q8NAV2 365 aa29.3■■■□□ 2.28
CNIH4-208ENST00000477413 ISCA1Q9BUE6 129 aa29.3■■■□□ 2.28
CNIH4-208ENST00000477413 TRIM28Q13263 835 aaKnown RBP29.29■■■□□ 2.28
CNIH4-208ENST00000477413 GRIPAP1Q4V328 841 aa29.29■■■□□ 2.28
CNIH4-208ENST00000477413 PSMD1Q99460 953 aa29.29■■■□□ 2.28
CNIH4-208ENST00000477413 SH3TC1Q8TE82 1336 aa29.28■■■□□ 2.28
CNIH4-208ENST00000477413 NLRP3Q96P20 1036 aa29.28■■■□□ 2.28
CNIH4-208ENST00000477413 RBM17Q96I25 401 aaKnown RBP29.27■■■□□ 2.28
CNIH4-208ENST00000477413 LRRC37AA6NMS7 1700 aa29.26■■■□□ 2.27
CNIH4-208ENST00000477413 OLFM4Q6UX06 510 aa29.26■■■□□ 2.27
CNIH4-208ENST00000477413 CACNA1FO60840 1977 aa29.25■■■□□ 2.27
CNIH4-208ENST00000477413 RRAGCQ9HB90 399 aa29.25■■■□□ 2.27
CNIH4-208ENST00000477413 FSTL1Q12841 308 aa29.24■■■□□ 2.27
CNIH4-208ENST00000477413 CCDC30Q5VVM6 783 aa29.24■■■□□ 2.27
CNIH4-208ENST00000477413 DPY19L2Q6NUT2 758 aa29.24■■■□□ 2.27
CNIH4-208ENST00000477413 TRMT112Q9UI30 125 aaKnown RBP29.24■■■□□ 2.27
CNIH4-208ENST00000477413 SCN4AP35499 1836 aa29.23■■■□□ 2.27
CNIH4-208ENST00000477413 VEGFAP15692 232 aaPredicted RBP29.23■■■□□ 2.27
CNIH4-208ENST00000477413 TSPYL6Q8N831 410 aa29.23■■■□□ 2.27
CNIH4-208ENST00000477413 TSR2Q969E8 191 aaKnown RBP29.23■■■□□ 2.27
CNIH4-208ENST00000477413 ELL2O00472 640 aaPredicted RBP29.22■■■□□ 2.27
CNIH4-208ENST00000477413 PPEF1O14829 653 aaPredicted RBP29.22■■■□□ 2.27
CNIH4-208ENST00000477413 GOLGA2Q08379 1002 aa29.22■■■□□ 2.27
CNIH4-208ENST00000477413 WDR63Q8IWG1 891 aa29.22■■■□□ 2.27
CNIH4-208ENST00000477413 C16orf71Q8IYS4 520 aaPredicted RBP29.22■■■□□ 2.27
CNIH4-208ENST00000477413 ABCC4O15439 1325 aa29.21■■■□□ 2.27
CNIH4-208ENST00000477413 POTECB2RU33 542 aa29.21■■■□□ 2.27
CNIH4-208ENST00000477413 PHAXQ9H814 394 aaKnown RBP29.21■■■□□ 2.27
CNIH4-208ENST00000477413 IARSP41252 1262 aaKnown RBP29.2■■■□□ 2.26
CNIH4-208ENST00000477413 SYNE4Q8N205 404 aa29.2■■■□□ 2.26
CNIH4-208ENST00000477413 L3MBTL3Q96JM7 780 aaPredicted RBP29.2■■■□□ 2.26
CNIH4-208ENST00000477413 ZNF277Q9NRM2 450 aaPredicted RBP29.2■■■□□ 2.26
CNIH4-208ENST00000477413 COL4A5P29400 1685 aa29.2■■■□□ 2.26
CNIH4-208ENST00000477413 HCLS1P14317 486 aaPredicted RBP29.19■■■□□ 2.26
CNIH4-208ENST00000477413 ATP6V0A2Q9Y487 856 aa29.19■■■□□ 2.26
CNIH4-208ENST00000477413 FANCIQ9NVI1 1328 aa29.19■■■□□ 2.26
CNIH4-208ENST00000477413 FZD9O00144 591 aa29.17■■■□□ 2.26
CNIH4-208ENST00000477413 RIC3Q7Z5B4 369 aa29.17■■■□□ 2.26
CNIH4-208ENST00000477413 ATP5J2-PTCD1G3V325 749 aa29.16■■■□□ 2.26
CNIH4-208ENST00000477413 BBOX1O75936 387 aa29.16■■■□□ 2.26
CNIH4-208ENST00000477413 DDX58O95786 925 aaKnown RBP29.16■■■□□ 2.26
CNIH4-208ENST00000477413 SF3B3Q15393 1217 aaKnown RBP29.16■■■□□ 2.26
CNIH4-208ENST00000477413 TWISTNBQ3B726 338 aaPredicted RBP29.16■■■□□ 2.26
CNIH4-208ENST00000477413 TAF1P21675 1872 aa29.16■■■□□ 2.26
CNIH4-208ENST00000477413 APLP1P51693 650 aa29.15■■■□□ 2.26
CNIH4-208ENST00000477413 TMC4Q7Z404 712 aa29.15■■■□□ 2.26
CNIH4-208ENST00000477413 CCDC191Q8NCU4 936 aa29.15■■■□□ 2.26
CNIH4-208ENST00000477413 SMC1BQ8NDV3 1235 aa29.15■■■□□ 2.26
CNIH4-208ENST00000477413 VPS33BQ9H267 617 aa29.15■■■□□ 2.26
CNIH4-208ENST00000477413 GRAPQ13588 217 aa29.14■■■□□ 2.26
CNIH4-208ENST00000477413 ZBTB38Q8NAP3 1195 aaPredicted RBP29.14■■■□□ 2.26
CNIH4-208ENST00000477413 GRAPLQ8TC17 118 aaPredicted RBP29.14■■■□□ 2.26
CNIH4-208ENST00000477413 METTL22Q9BUU2 404 aaPredicted RBP29.14■■■□□ 2.26
CNIH4-208ENST00000477413 RTFDC1Q9BY42 306 aaPredicted RBP29.14■■■□□ 2.26
CNIH4-208ENST00000477413 LTBP1Q14766 1721 aa29.14■■■□□ 2.25
CNIH4-208ENST00000477413 DUOX1Q9NRD9 1551 aa29.13■■■□□ 2.25
CNIH4-208ENST00000477413 DDX46Q7L014 1031 aaKnown RBP29.13■■■□□ 2.25
CNIH4-208ENST00000477413 SLC51AQ86UW1 340 aa29.13■■■□□ 2.25
CNIH4-208ENST00000477413 FAM89AQ96GI7 184 aa29.13■■■□□ 2.25
CNIH4-208ENST00000477413 ZNF541Q9H0D2 1346 aa29.13■■■□□ 2.25
CNIH4-208ENST00000477413 ADAMTSL1Q8N6G6 1762 aa29.12■■■□□ 2.25
CNIH4-208ENST00000477413 DDNO94850 711 aaPredicted RBP29.12■■■□□ 2.25
CNIH4-208ENST00000477413 SP8Q8IXZ3 490 aa29.12■■■□□ 2.25
CNIH4-208ENST00000477413 STK31Q9BXU1 1019 aa29.12■■■□□ 2.25
CNIH4-208ENST00000477413 COL4A1P02462 1669 aa29.11■■■□□ 2.25
CNIH4-208ENST00000477413 HSP90B1P14625 803 aaKnown RBP29.1■■■□□ 2.25
CNIH4-208ENST00000477413 KSR2Q6VAB6 950 aa29.1■■■□□ 2.25
CNIH4-208ENST00000477413 ZNF521Q96K83 1311 aa29.1■■■□□ 2.25
CNIH4-208ENST00000477413 IQCA1LA6NCM1 817 aa29.09■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms