RNA–Protein interactions for RNA: ENST00000477377.1

COMMD6-209, Transcript of COMM domain containing 6, humanhuman

TSL 3

Gene COMMD6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-209ENST00000477377 KIF3CO14782 793 aa20.17■□□□□ 0.82
COMMD6-209ENST00000477377 ANKRD13DQ6ZTN6 518 aa20.17■□□□□ 0.82
COMMD6-209ENST00000477377 SYNE4Q8N205 404 aa20.17■□□□□ 0.82
COMMD6-209ENST00000477377 ISCA1Q9BUE6 129 aa20.17■□□□□ 0.82
COMMD6-209ENST00000477377 SALL2Q9Y467 1007 aaPredicted RBP20.17■□□□□ 0.82
COMMD6-209ENST00000477377 ANKRD36CQ5JPF3 1778 aa20.16■□□□□ 0.82
COMMD6-209ENST00000477377 GTF2E1P29083 439 aaPredicted RBP20.16■□□□□ 0.82
COMMD6-209ENST00000477377 C1QTNF8P60827 252 aa20.16■□□□□ 0.82
COMMD6-209ENST00000477377 HSP90AB3PQ58FF7 597 aa20.16■□□□□ 0.82
COMMD6-209ENST00000477377 OLFM4Q6UX06 510 aa20.16■□□□□ 0.82
COMMD6-209ENST00000477377 PPP1R42Q7Z4L9 355 aa20.16■□□□□ 0.82
COMMD6-209ENST00000477377 WDR63Q8IWG1 891 aa20.16■□□□□ 0.82
COMMD6-209ENST00000477377 UTP14AQ9BVJ6 771 aaKnown RBP20.16■□□□□ 0.82
COMMD6-209ENST00000477377 CACNA1SQ13698 1873 aa20.16■□□□□ 0.82
COMMD6-209ENST00000477377 LMNB1P20700 586 aa20.15■□□□□ 0.82
COMMD6-209ENST00000477377 HOXA10P31260 410 aaPredicted RBP20.15■□□□□ 0.82
COMMD6-209ENST00000477377 SNED1Q8TER0 1413 aa20.15■□□□□ 0.82
COMMD6-209ENST00000477377 LTBP3Q9NS15 1303 aa20.14■□□□□ 0.81
COMMD6-209ENST00000477377 SLC51AQ86UW1 340 aa20.14■□□□□ 0.81
COMMD6-209ENST00000477377 FANCIQ9NVI1 1328 aa20.13■□□□□ 0.81
COMMD6-209ENST00000477377 CCDC88AQ3V6T2 1871 aa20.13■□□□□ 0.81
COMMD6-209ENST00000477377 ZNF521Q96K83 1311 aa20.12■□□□□ 0.81
COMMD6-209ENST00000477377 ATP5J2-PTCD1G3V325 749 aa20.12■□□□□ 0.81
COMMD6-209ENST00000477377 ALDH1B1P30837 517 aa20.12■□□□□ 0.81
COMMD6-209ENST00000477377 TRIM28Q13263 835 aaKnown RBP20.12■□□□□ 0.81
COMMD6-209ENST00000477377 ZNF428Q96B54 188 aa20.12■□□□□ 0.81
COMMD6-209ENST00000477377 NMRK2Q9NPI5 230 aa20.12■□□□□ 0.81
COMMD6-209ENST00000477377 RNF123Q5XPI4 1314 aa20.11■□□□□ 0.81
COMMD6-209ENST00000477377 TWISTNBQ3B726 338 aaPredicted RBP20.11■□□□□ 0.81
COMMD6-209ENST00000477377 CCDC30Q5VVM6 783 aa20.11■□□□□ 0.81
COMMD6-209ENST00000477377 TCERG1O14776 1098 aaKnown RBP20.1■□□□□ 0.81
COMMD6-209ENST00000477377 VAMP4O75379 141 aa20.1■□□□□ 0.81
COMMD6-209ENST00000477377 HCLS1P14317 486 aaPredicted RBP20.1■□□□□ 0.81
COMMD6-209ENST00000477377 CRAMP1Q96RY5 1269 aa20.1■□□□□ 0.81
COMMD6-209ENST00000477377 TAOK3Q9H2K8 898 aa20.1■□□□□ 0.81
COMMD6-209ENST00000477377 ZC3H4Q9UPT8 1303 aaKnown RBP20.09■□□□□ 0.81
COMMD6-209ENST00000477377 CCDC93Q567U6 631 aa20.09■□□□□ 0.81
COMMD6-209ENST00000477377 SOGA3Q5TF21 947 aa20.09■□□□□ 0.81
COMMD6-209ENST00000477377 G2E3Q7L622 706 aa20.09■□□□□ 0.81
COMMD6-209ENST00000477377 NLRP3Q96P20 1036 aa20.09■□□□□ 0.81
COMMD6-209ENST00000477377 TRMT112Q9UI30 125 aaKnown RBP20.09■□□□□ 0.81
COMMD6-209ENST00000477377 SH3TC1Q8TE82 1336 aa20.08■□□□□ 0.81
COMMD6-209ENST00000477377 DICER1Q9UPY3 1922 aaKnown RBP20.08■□□□□ 0.81
COMMD6-209ENST00000477377 LAMB2P55268 1798 aa20.08■□□□□ 0.8
COMMD6-209ENST00000477377 EXOSC9Q06265 439 aaKnown RBP20.07■□□□□ 0.8
COMMD6-209ENST00000477377 RIC3Q7Z5B4 369 aa20.07■□□□□ 0.8
COMMD6-209ENST00000477377 RPGRQ92834 1020 aaKnown RBP20.07■□□□□ 0.8
COMMD6-209ENST00000477377 FAM89AQ96GI7 184 aa20.07■□□□□ 0.8
COMMD6-209ENST00000477377 RBM17Q96I25 401 aaKnown RBP20.07■□□□□ 0.8
COMMD6-209ENST00000477377 GLTPD2A6NH11 291 aa20.06■□□□□ 0.8
COMMD6-209ENST00000477377 POTECB2RU33 542 aa20.06■□□□□ 0.8
COMMD6-209ENST00000477377 FKBP4Q02790 459 aaKnown RBP eCLIP20.06■□□□□ 0.8
COMMD6-209ENST00000477377 GOLGA2Q08379 1002 aa20.06■□□□□ 0.8
COMMD6-209ENST00000477377 DDX60Q8IY21 1712 aaKnown RBP20.06■□□□□ 0.8
COMMD6-209ENST00000477377 ABCC4O15439 1325 aa20.05■□□□□ 0.8
COMMD6-209ENST00000477377 TIAM2Q8IVF5 1701 aa20.05■□□□□ 0.8
COMMD6-209ENST00000477377 RTKN2Q8IZC4 609 aa20.05■□□□□ 0.8
COMMD6-209ENST00000477377 MYD88Q99836 296 aa20.05■□□□□ 0.8
COMMD6-209ENST00000477377 METTL22Q9BUU2 404 aaPredicted RBP20.05■□□□□ 0.8
COMMD6-209ENST00000477377 SLC4A2P04920 1241 aa20.04■□□□□ 0.8
COMMD6-209ENST00000477377 KSR2Q6VAB6 950 aa20.04■□□□□ 0.8
COMMD6-209ENST00000477377 CHMP4AQ9BY43 222 aa20.04■□□□□ 0.8
COMMD6-209ENST00000477377 RRAGCQ9HB90 399 aa20.04■□□□□ 0.8
COMMD6-209ENST00000477377 ZNF277Q9NRM2 450 aaPredicted RBP20.04■□□□□ 0.8
COMMD6-209ENST00000477377 COL4A1P02462 1669 aa20.03■□□□□ 0.8
COMMD6-209ENST00000477377 PI4KAP2A4QPH2 592 aa20.03■□□□□ 0.8
COMMD6-209ENST00000477377 CCER2I3L3R5 266 aa20.03■□□□□ 0.8
COMMD6-209ENST00000477377 IGKV5-2P06315 115 aa20.03■□□□□ 0.8
COMMD6-209ENST00000477377 SF3B3Q15393 1217 aaKnown RBP20.03■□□□□ 0.8
COMMD6-209ENST00000477377 PI4KAP1Q8N8J0 262 aa20.03■□□□□ 0.8
COMMD6-209ENST00000477377 MAP3K2Q9Y2U5 619 aa20.03■□□□□ 0.8
COMMD6-209ENST00000477377 KDM2BQ8NHM5 1336 aa20.02■□□□□ 0.8
COMMD6-209ENST00000477377 PPEF1O14829 653 aaPredicted RBP20.02■□□□□ 0.8
COMMD6-209ENST00000477377 RTL5Q5HYW3 569 aaPredicted RBP20.02■□□□□ 0.8
COMMD6-209ENST00000477377 ZBTB38Q8NAP3 1195 aaPredicted RBP20.02■□□□□ 0.8
COMMD6-209ENST00000477377 PSMD1Q99460 953 aa20.02■□□□□ 0.8
COMMD6-209ENST00000477377 ATP6V0A2Q9Y487 856 aa20.02■□□□□ 0.8
COMMD6-209ENST00000477377 COL4A5P29400 1685 aa20.02■□□□□ 0.8
COMMD6-209ENST00000477377 TAF1P21675 1872 aa20.01■□□□□ 0.79
COMMD6-209ENST00000477377 CC2D2BQ6DHV5 1058 aa20.01■□□□□ 0.79
COMMD6-209ENST00000477377 CCDC191Q8NCU4 936 aa20.01■□□□□ 0.79
COMMD6-209ENST00000477377 STK31Q9BXU1 1019 aa20.01■□□□□ 0.79
COMMD6-209ENST00000477377 IRS4O14654 1257 aaPredicted RBP20■□□□□ 0.79
COMMD6-209ENST00000477377 TOMM70O94826 608 aa20■□□□□ 0.79
COMMD6-209ENST00000477377 DDX58O95786 925 aaKnown RBP20■□□□□ 0.79
COMMD6-209ENST00000477377 GRAPQ13588 217 aa20■□□□□ 0.79
COMMD6-209ENST00000477377 GRAPLQ8TC17 118 aaPredicted RBP20■□□□□ 0.79
COMMD6-209ENST00000477377 JARID2Q92833 1246 aaPredicted RBP20■□□□□ 0.79
COMMD6-209ENST00000477377 BBOX1O75936 387 aa19.99■□□□□ 0.79
COMMD6-209ENST00000477377 PCCAP05165 728 aaPredicted RBP19.99■□□□□ 0.79
COMMD6-209ENST00000477377 IARSP41252 1262 aaKnown RBP19.99■□□□□ 0.79
COMMD6-209ENST00000477377 FLIIQ13045 1269 aa19.99■□□□□ 0.79
COMMD6-209ENST00000477377 WDR90Q96KV7 1748 aa19.99■□□□□ 0.79
COMMD6-209ENST00000477377 DDNO94850 711 aaPredicted RBP19.98■□□□□ 0.79
COMMD6-209ENST00000477377 SP8Q8IXZ3 490 aa19.98■□□□□ 0.79
COMMD6-209ENST00000477377 CELF1Q92879 486 aaKnown RBP19.98■□□□□ 0.79
COMMD6-209ENST00000477377 MYH16Q9H6N6 1097 aa19.98■□□□□ 0.79
COMMD6-209ENST00000477377 CWC25Q9NXE8 425 aaPredicted RBP19.98■□□□□ 0.79
COMMD6-209ENST00000477377 FZD9O00144 591 aa19.97■□□□□ 0.79
COMMD6-209ENST00000477377 GRIPAP1Q4V328 841 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms