RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 DDX60Q8IY21 1712 aaKnown RBP20.2■□□□□ 0.82
COPS3-207ENST00000477299 NEURL1BA8MQ27 555 aa20.2■□□□□ 0.82
COPS3-207ENST00000477299 PLIN1O60240 522 aa20.2■□□□□ 0.82
COPS3-207ENST00000477299 TRIM28Q13263 835 aaKnown RBP20.2■□□□□ 0.82
COPS3-207ENST00000477299 FAM89AQ96GI7 184 aa20.2■□□□□ 0.82
COPS3-207ENST00000477299 C10orf71Q711Q0 1435 aa20.19■□□□□ 0.82
COPS3-207ENST00000477299 TRIM27P14373 513 aa20.19■□□□□ 0.82
COPS3-207ENST00000477299 PARP10Q53GL7 1025 aa20.19■□□□□ 0.82
COPS3-207ENST00000477299 TPTE2Q6XPS3 522 aa20.19■□□□□ 0.82
COPS3-207ENST00000477299 C3orf67Q6ZVT6 689 aa20.19■□□□□ 0.82
COPS3-207ENST00000477299 CNBD1Q8NA66 436 aa20.19■□□□□ 0.82
COPS3-207ENST00000477299 CLUAP1Q96AJ1 413 aa20.19■□□□□ 0.82
COPS3-207ENST00000477299 UTP14AQ9BVJ6 771 aaKnown RBP20.19■□□□□ 0.82
COPS3-207ENST00000477299 TRMT112Q9UI30 125 aaKnown RBP20.19■□□□□ 0.82
COPS3-207ENST00000477299 TAF1P21675 1872 aa20.19■□□□□ 0.82
COPS3-207ENST00000477299 SYT17Q9BSW7 474 aa20.18■□□□□ 0.82
COPS3-207ENST00000477299 WWC3Q9ULE0 1092 aa20.18■□□□□ 0.82
COPS3-207ENST00000477299 COL11A2P13942 1736 aaPredicted RBP20.18■□□□□ 0.82
COPS3-207ENST00000477299 HCLS1P14317 486 aaPredicted RBP20.17■□□□□ 0.82
COPS3-207ENST00000477299 CHRNA5P30532 468 aa20.17■□□□□ 0.82
COPS3-207ENST00000477299 NEXNQ0ZGT2 675 aa20.17■□□□□ 0.82
COPS3-207ENST00000477299 PPP1R42Q7Z4L9 355 aa20.17■□□□□ 0.82
COPS3-207ENST00000477299 CCDC191Q8NCU4 936 aa20.17■□□□□ 0.82
COPS3-207ENST00000477299 LINS1Q8NG48 757 aa20.17■□□□□ 0.82
COPS3-207ENST00000477299 CWC25Q9NXE8 425 aaPredicted RBP20.17■□□□□ 0.82
COPS3-207ENST00000477299 KIF16BQ96L93 1317 aa20.17■□□□□ 0.82
COPS3-207ENST00000477299 CACNA1SQ13698 1873 aa20.16■□□□□ 0.82
COPS3-207ENST00000477299 A0A0G2JLW4 131 aa20.16■□□□□ 0.82
COPS3-207ENST00000477299 NPHP1O15259 732 aa20.16■□□□□ 0.82
COPS3-207ENST00000477299 RLBP1P12271 317 aa20.16■□□□□ 0.82
COPS3-207ENST00000477299 GTF2E1P29083 439 aaPredicted RBP20.16■□□□□ 0.82
COPS3-207ENST00000477299 GCKRQ14397 625 aa20.16■□□□□ 0.82
COPS3-207ENST00000477299 ZKSCAN2Q63HK3 967 aa20.16■□□□□ 0.82
COPS3-207ENST00000477299 ATF7IPQ6VMQ6 1270 aa20.16■□□□□ 0.82
COPS3-207ENST00000477299 ARHGAP45Q92619 1136 aa20.16■□□□□ 0.82
COPS3-207ENST00000477299 DPEP1P16444 411 aa20.15■□□□□ 0.82
COPS3-207ENST00000477299 API5Q9BZZ5 524 aaKnown RBP20.15■□□□□ 0.82
COPS3-207ENST00000477299 SRCIN1Q9C0H9 1055 aa20.15■□□□□ 0.82
COPS3-207ENST00000477299 NYXQ9GZU5 481 aa20.15■□□□□ 0.82
COPS3-207ENST00000477299 CD2APQ9Y5K6 639 aa20.15■□□□□ 0.82
COPS3-207ENST00000477299 IBTKQ9P2D0 1353 aaPredicted RBP20.14■□□□□ 0.81
COPS3-207ENST00000477299 H7C1W4 665 aa20.14■□□□□ 0.81
COPS3-207ENST00000477299 KCNA3P22001 575 aa20.14■□□□□ 0.81
COPS3-207ENST00000477299 BRCA1P38398 1863 aaKnown RBP20.13■□□□□ 0.81
COPS3-207ENST00000477299 PXDNLA1KZ92 1463 aa20.13■□□□□ 0.81
COPS3-207ENST00000477299 ABCC4O15439 1325 aa20.13■□□□□ 0.81
COPS3-207ENST00000477299 SH3TC1Q8TE82 1336 aa20.13■□□□□ 0.81
COPS3-207ENST00000477299 IPO8O15397 1037 aaKnown RBP20.13■□□□□ 0.81
COPS3-207ENST00000477299 CASP7P55210 303 aa20.13■□□□□ 0.81
COPS3-207ENST00000477299 ST5P78524 1137 aa20.13■□□□□ 0.81
COPS3-207ENST00000477299 SLC10A5Q5PT55 438 aa20.13■□□□□ 0.81
COPS3-207ENST00000477299 C20orf194Q5TEA3 1177 aa20.13■□□□□ 0.81
COPS3-207ENST00000477299 UBE3BQ7Z3V4 1068 aa20.13■□□□□ 0.81
COPS3-207ENST00000477299 ZBTB38Q8NAP3 1195 aaPredicted RBP20.13■□□□□ 0.81
COPS3-207ENST00000477299 PANK1Q8TE04 598 aa20.13■□□□□ 0.81
COPS3-207ENST00000477299 BRIP1Q9BX63 1249 aa20.13■□□□□ 0.81
COPS3-207ENST00000477299 MYH3P11055 1940 aa20.12■□□□□ 0.81
COPS3-207ENST00000477299 PCCAP05165 728 aaPredicted RBP20.12■□□□□ 0.81
COPS3-207ENST00000477299 TMEM57Q8N5G2 664 aa20.12■□□□□ 0.81
COPS3-207ENST00000477299 DLEC1Q9Y238 1755 aa20.12■□□□□ 0.81
COPS3-207ENST00000477299 COL4A1P02462 1669 aa20.11■□□□□ 0.81
COPS3-207ENST00000477299 IRS4O14654 1257 aaPredicted RBP20.11■□□□□ 0.81
COPS3-207ENST00000477299 ALDH1L1O75891 902 aa20.11■□□□□ 0.81
COPS3-207ENST00000477299 NBPF7P0C2Y1 421 aaPredicted RBP20.11■□□□□ 0.81
COPS3-207ENST00000477299 C2CD5Q86YS7 1000 aa20.11■□□□□ 0.81
COPS3-207ENST00000477299 USP44Q9H0E7 712 aa20.1■□□□□ 0.81
COPS3-207ENST00000477299 SLX4Q8IY92 1834 aa20.09■□□□□ 0.81
COPS3-207ENST00000477299 KLRG2A4D1S0 409 aaPredicted RBP20.09■□□□□ 0.81
COPS3-207ENST00000477299 TGFB2P61812 414 aa20.09■□□□□ 0.81
COPS3-207ENST00000477299 EPHA10Q5JZY3 1008 aa20.09■□□□□ 0.81
COPS3-207ENST00000477299 INTS3Q68E01 1043 aaKnown RBP20.09■□□□□ 0.81
COPS3-207ENST00000477299 SLC51AQ86UW1 340 aa20.09■□□□□ 0.81
COPS3-207ENST00000477299 GRM8O00222 908 aa20.08■□□□□ 0.81
COPS3-207ENST00000477299 PDE6BP35913 854 aa20.08■□□□□ 0.81
COPS3-207ENST00000477299 CCT4P50991 539 aaKnown RBP20.08■□□□□ 0.81
COPS3-207ENST00000477299 DZIP1LQ8IYY4 767 aaKnown RBP20.08■□□□□ 0.81
COPS3-207ENST00000477299 KAZALD1Q96I82 304 aa20.08■□□□□ 0.81
COPS3-207ENST00000477299 CCDC85AQ96PX6 553 aaPredicted RBP20.08■□□□□ 0.81
COPS3-207ENST00000477299 C9orf78Q9NZ63 289 aaPredicted RBP20.08■□□□□ 0.81
COPS3-207ENST00000477299 CDHR2Q9BYE9 1310 aa20.07■□□□□ 0.8
COPS3-207ENST00000477299 SRGNP10124 158 aa20.07■□□□□ 0.8
COPS3-207ENST00000477299 RNF123Q5XPI4 1314 aa20.06■□□□□ 0.8
COPS3-207ENST00000477299 H0YIN7 160 aa20.06■□□□□ 0.8
COPS3-207ENST00000477299 ZNF622Q969S3 477 aaKnown RBP eCLIP20.06■□□□□ 0.8
COPS3-207ENST00000477299 SUCLG2Q96I99 432 aa20.06■□□□□ 0.8
COPS3-207ENST00000477299 NLRP3Q96P20 1036 aa20.06■□□□□ 0.8
COPS3-207ENST00000477299 MEIS3Q99687 375 aa20.06■□□□□ 0.8
COPS3-207ENST00000477299 RIC1Q4ADV7 1423 aa20.05■□□□□ 0.8
COPS3-207ENST00000477299 FOXO4P98177 505 aa20.05■□□□□ 0.8
COPS3-207ENST00000477299 CRY2Q49AN0 593 aa20.05■□□□□ 0.8
COPS3-207ENST00000477299 UTYO14607 1347 aa20.04■□□□□ 0.8
COPS3-207ENST00000477299 SPEF2Q9C093 1822 aa20.04■□□□□ 0.8
COPS3-207ENST00000477299 PDE8AO60658 829 aa20.04■□□□□ 0.8
COPS3-207ENST00000477299 RRP1P56182 461 aaKnown RBP20.04■□□□□ 0.8
COPS3-207ENST00000477299 FTSJ3Q8IY81 847 aaKnown RBP20.04■□□□□ 0.8
COPS3-207ENST00000477299 SEC31BQ9NQW1 1179 aa20.04■□□□□ 0.8
COPS3-207ENST00000477299 SUPT16HQ9Y5B9 1047 aaKnown RBP20.04■□□□□ 0.8
COPS3-207ENST00000477299 YBX3P16989 372 aaKnown RBP eCLIP20.03■□□□□ 0.86e-7■■■■□ 21.6
COPS3-207ENST00000477299 SF3B3Q15393 1217 aaKnown RBP20.03■□□□□ 0.8
COPS3-207ENST00000477299 TTLL11Q8NHH1 800 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms