RNA–Protein interactions for RNA: ENST00000477169.5

SMARCD3-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 5

Gene SMARCD3, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-210ENST00000477169 FSTL1Q12841 308 aa22.31■■□□□ 1.16
SMARCD3-210ENST00000477169 PPP1R42Q7Z4L9 355 aa22.31■■□□□ 1.16
SMARCD3-210ENST00000477169 WDR63Q8IWG1 891 aa22.31■■□□□ 1.16
SMARCD3-210ENST00000477169 DDX21Q9NR30 783 aaKnown RBP eCLIP22.31■■□□□ 1.16
SMARCD3-210ENST00000477169 IL16Q14005 1332 aa22.31■■□□□ 1.16
SMARCD3-210ENST00000477169 ZNF521Q96K83 1311 aa22.31■■□□□ 1.16
SMARCD3-210ENST00000477169 ABCC12Q96J65 1359 aa22.3■■□□□ 1.16
SMARCD3-210ENST00000477169 HOXB7P09629 217 aa22.3■■□□□ 1.16
SMARCD3-210ENST00000477169 APLP1P51693 650 aa22.3■■□□□ 1.16
SMARCD3-210ENST00000477169 GNAI1P63096 354 aa22.3■■□□□ 1.16
SMARCD3-210ENST00000477169 KRT24Q2M2I5 525 aa22.3■■□□□ 1.16
SMARCD3-210ENST00000477169 COPS6Q7L5N1 327 aa22.3■■□□□ 1.16
SMARCD3-210ENST00000477169 NECTIN2Q92692 538 aa22.3■■□□□ 1.16
SMARCD3-210ENST00000477169 RIC1Q4ADV7 1423 aa22.3■■□□□ 1.16
SMARCD3-210ENST00000477169 NTSR2O95665 410 aa22.29■■□□□ 1.16
SMARCD3-210ENST00000477169 RTKN2Q8IZC4 609 aa22.29■■□□□ 1.16
SMARCD3-210ENST00000477169 MBIPQ9NS73 344 aa22.29■■□□□ 1.16
SMARCD3-210ENST00000477169 HOXA10P31260 410 aaPredicted RBP22.28■■□□□ 1.16
SMARCD3-210ENST00000477169 HSP90AB3PQ58FF7 597 aa22.28■■□□□ 1.16
SMARCD3-210ENST00000477169 XAGE3Q8WTP9 111 aa22.28■■□□□ 1.16
SMARCD3-210ENST00000477169 FKBP4Q02790 459 aaKnown RBP eCLIP22.27■■□□□ 1.16
SMARCD3-210ENST00000477169 AIMP1Q12904 312 aaKnown RBP22.27■■□□□ 1.16
SMARCD3-210ENST00000477169 RPGRQ92834 1020 aaKnown RBP22.27■■□□□ 1.16
SMARCD3-210ENST00000477169 SLC10A5Q5PT55 438 aa22.26■■□□□ 1.15
SMARCD3-210ENST00000477169 HDGFL1Q5TGJ6 251 aa22.26■■□□□ 1.15
SMARCD3-210ENST00000477169 UTP14AQ9BVJ6 771 aaKnown RBP22.26■■□□□ 1.15
SMARCD3-210ENST00000477169 POTECB2RU33 542 aa22.25■■□□□ 1.15
SMARCD3-210ENST00000477169 CC2D2BQ6DHV5 1058 aa22.25■■□□□ 1.15
SMARCD3-210ENST00000477169 OLFM4Q6UX06 510 aa22.25■■□□□ 1.15
SMARCD3-210ENST00000477169 SMC1BQ8NDV3 1235 aa22.25■■□□□ 1.15
SMARCD3-210ENST00000477169 NLRP3Q96P20 1036 aa22.25■■□□□ 1.15
SMARCD3-210ENST00000477169 WDR90Q96KV7 1748 aa22.24■■□□□ 1.15
SMARCD3-210ENST00000477169 TCIRG1Q13488 830 aa22.24■■□□□ 1.15
SMARCD3-210ENST00000477169 TSR2Q969E8 191 aaKnown RBP22.24■■□□□ 1.15
SMARCD3-210ENST00000477169 RBM17Q96I25 401 aaKnown RBP22.24■■□□□ 1.15
SMARCD3-210ENST00000477169 CRAMP1Q96RY5 1269 aa22.24■■□□□ 1.15
SMARCD3-210ENST00000477169 SPINK5Q9NQ38 1064 aaPredicted RBP22.24■■□□□ 1.15
SMARCD3-210ENST00000477169 CHPF2Q9P2E5 772 aa22.24■■□□□ 1.15
SMARCD3-210ENST00000477169 DBF4Q9UBU7 674 aaPredicted RBP22.24■■□□□ 1.15
SMARCD3-210ENST00000477169 RNF123Q5XPI4 1314 aa22.24■■□□□ 1.15
SMARCD3-210ENST00000477169 HNRNPUQ00839 825 aaKnown RBP eCLIP22.23■■□□□ 1.15
SMARCD3-210ENST00000477169 DUSP27Q5VZP5 1158 aa22.23■■□□□ 1.15
SMARCD3-210ENST00000477169 GRIPAP1Q4V328 841 aa22.22■■□□□ 1.15
SMARCD3-210ENST00000477169 NLRP10Q86W26 655 aa22.22■■□□□ 1.15
SMARCD3-210ENST00000477169 PSMD1Q99460 953 aa22.22■■□□□ 1.15
SMARCD3-210ENST00000477169 ZNF277Q9NRM2 450 aaPredicted RBP22.22■■□□□ 1.15
SMARCD3-210ENST00000477169 DDNO94850 711 aaPredicted RBP22.21■■□□□ 1.15
SMARCD3-210ENST00000477169 ANKRD13DQ6ZTN6 518 aa22.21■■□□□ 1.15
SMARCD3-210ENST00000477169 SYNE4Q8N205 404 aa22.21■■□□□ 1.15
SMARCD3-210ENST00000477169 HYPKQ9NX55 129 aa22.21■■□□□ 1.15
SMARCD3-210ENST00000477169 GOLGA2Q08379 1002 aa22.2■■□□□ 1.14
SMARCD3-210ENST00000477169 C3orf67Q6ZVT6 689 aa22.2■■□□□ 1.14
SMARCD3-210ENST00000477169 PLBD2Q8NHP8 589 aa22.2■■□□□ 1.14
SMARCD3-210ENST00000477169 FANCIQ9NVI1 1328 aa22.2■■□□□ 1.14
SMARCD3-210ENST00000477169 ANKRD36CQ5JPF3 1778 aa22.2■■□□□ 1.14
SMARCD3-210ENST00000477169 IARSP41252 1262 aaKnown RBP22.19■■□□□ 1.14
SMARCD3-210ENST00000477169 DNAJC5GQ8N7S2 189 aa22.19■■□□□ 1.14
SMARCD3-210ENST00000477169 SNED1Q8TER0 1413 aa22.19■■□□□ 1.14
SMARCD3-210ENST00000477169 C8orf58Q8NAV2 365 aa22.18■■□□□ 1.14
SMARCD3-210ENST00000477169 MYH16Q9H6N6 1097 aa22.18■■□□□ 1.14
SMARCD3-210ENST00000477169 TRMT112Q9UI30 125 aaKnown RBP22.18■■□□□ 1.14
SMARCD3-210ENST00000477169 SH3TC1Q8TE82 1336 aa22.17■■□□□ 1.14
SMARCD3-210ENST00000477169 PPEF1O14829 653 aaPredicted RBP22.17■■□□□ 1.14
SMARCD3-210ENST00000477169 L3MBTL3Q96JM7 780 aaPredicted RBP22.17■■□□□ 1.14
SMARCD3-210ENST00000477169 E9PSI1 815 aa22.16■■□□□ 1.14
SMARCD3-210ENST00000477169 FZD9O00144 591 aa22.16■■□□□ 1.14
SMARCD3-210ENST00000477169 SLFN5Q08AF3 891 aa22.16■■□□□ 1.14
SMARCD3-210ENST00000477169 CDCA7LQ96GN5 454 aa22.16■■□□□ 1.14
SMARCD3-210ENST00000477169 IQCA1LA6NCM1 817 aa22.15■■□□□ 1.14
SMARCD3-210ENST00000477169 HCLS1P14317 486 aaPredicted RBP22.15■■□□□ 1.14
SMARCD3-210ENST00000477169 TSPYL6Q8N831 410 aa22.15■■□□□ 1.14
SMARCD3-210ENST00000477169 JDP2Q8WYK2 163 aa22.15■■□□□ 1.14
SMARCD3-210ENST00000477169 ISCA1Q9BUE6 129 aa22.15■■□□□ 1.14
SMARCD3-210ENST00000477169 CHMP4AQ9BY43 222 aa22.15■■□□□ 1.14
SMARCD3-210ENST00000477169 TMX4Q9H1E5 349 aaPredicted RBP22.15■■□□□ 1.14
SMARCD3-210ENST00000477169 ELL2O00472 640 aaPredicted RBP22.14■■□□□ 1.13
SMARCD3-210ENST00000477169 TCERG1O14776 1098 aaKnown RBP22.14■■□□□ 1.13
SMARCD3-210ENST00000477169 BBOX1O75936 387 aa22.14■■□□□ 1.13
SMARCD3-210ENST00000477169 ATP6V0A2Q9Y487 856 aa22.14■■□□□ 1.13
SMARCD3-210ENST00000477169 ABCC4O15439 1325 aa22.13■■□□□ 1.13
SMARCD3-210ENST00000477169 ZNF541Q9H0D2 1346 aa22.13■■□□□ 1.13
SMARCD3-210ENST00000477169 TRIM28Q13263 835 aaKnown RBP22.13■■□□□ 1.13
SMARCD3-210ENST00000477169 ZBED9Q6R2W3 1325 aa22.12■■□□□ 1.13
SMARCD3-210ENST00000477169 HTRA3P83110 453 aa22.12■■□□□ 1.13
SMARCD3-210ENST00000477169 EXOSC9Q06265 439 aaKnown RBP22.12■■□□□ 1.13
SMARCD3-210ENST00000477169 TRMT2AQ8IZ69 625 aaKnown RBP22.12■■□□□ 1.13
SMARCD3-210ENST00000477169 SCN4AP35499 1836 aa22.12■■□□□ 1.13
SMARCD3-210ENST00000477169 ATP5J2-PTCD1G3V325 749 aa22.11■■□□□ 1.13
SMARCD3-210ENST00000477169 CHADLQ6NUI6 762 aa22.11■■□□□ 1.13
SMARCD3-210ENST00000477169 DDX46Q7L014 1031 aaKnown RBP22.11■■□□□ 1.13
SMARCD3-210ENST00000477169 RIC3Q7Z5B4 369 aa22.11■■□□□ 1.13
SMARCD3-210ENST00000477169 VPS33BQ9H267 617 aa22.11■■□□□ 1.13
SMARCD3-210ENST00000477169 TAF1DQ9H5J8 278 aaPredicted RBP22.11■■□□□ 1.13
SMARCD3-210ENST00000477169 PHAXQ9H814 394 aaKnown RBP22.11■■□□□ 1.13
SMARCD3-210ENST00000477169 LAMB2P55268 1798 aa22.1■■□□□ 1.13
SMARCD3-210ENST00000477169 TWISTNBQ3B726 338 aaPredicted RBP22.1■■□□□ 1.13
SMARCD3-210ENST00000477169 SP8Q8IXZ3 490 aa22.1■■□□□ 1.13
SMARCD3-210ENST00000477169 GPC2Q8N158 579 aa22.1■■□□□ 1.13
SMARCD3-210ENST00000477169 KLRG1Q96E93 195 aa22.1■■□□□ 1.13
SMARCD3-210ENST00000477169 FAM89AQ96GI7 184 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 112.1 ms