RNA–Protein interactions for RNA: ENST00000476998.5

ATXN10-208, Transcript of ataxin 10, human

TSL 3

Gene ATXN10, Length 482 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN10-208	ENST00000476998	NYX	Q9GZU5	481 aa		11.67	□□□□□ -0.54
ATXN10-208	ENST00000476998	CREBZF	Q9NS37	354 aa		11.67	□□□□□ -0.54
ATXN10-208	ENST00000476998	IQCA1L	A6NCM1	817 aa		11.66	□□□□□ -0.54
ATXN10-208	ENST00000476998	EIF2S2	P20042	333 aa	Known RBP	11.66	□□□□□ -0.54
ATXN10-208	ENST00000476998	EAPP	Q56P03	285 aa	Predicted RBP	11.66	□□□□□ -0.54
ATXN10-208	ENST00000476998	GIGYF2	Q6Y7W6	1299 aa	Known RBP	11.66	□□□□□ -0.54
ATXN10-208	ENST00000476998	LDHD	Q86WU2	507 aa		11.66	□□□□□ -0.54
ATXN10-208	ENST00000476998	TSPYL4	Q9UJ04	414 aa		11.66	□□□□□ -0.54
ATXN10-208	ENST00000476998	RNF123	Q5XPI4	1314 aa		11.65	□□□□□ -0.54
ATXN10-208	ENST00000476998	MAPK8IP3	Q9UPT6	1336 aa		11.65	□□□□□ -0.54
ATXN10-208	ENST00000476998	ADAMTSL1	Q8N6G6	1762 aa		11.65	□□□□□ -0.54
ATXN10-208	ENST00000476998	EPHX2	P34913	555 aa		11.65	□□□□□ -0.54
ATXN10-208	ENST00000476998	TMPO	P42166	694 aa	Known RBP	11.65	□□□□□ -0.54
ATXN10-208	ENST00000476998	NECTIN2	Q92692	538 aa		11.65	□□□□□ -0.54
ATXN10-208	ENST00000476998	PSMD1	Q99460	953 aa		11.65	□□□□□ -0.54
ATXN10-208	ENST00000476998	PNN	Q9H307	717 aa	Known RBP	11.65	□□□□□ -0.54
ATXN10-208	ENST00000476998	HACL1	Q9UJ83	578 aa		11.65	□□□□□ -0.54
ATXN10-208	ENST00000476998	CLEC11A	Q9Y240	323 aa		11.65	□□□□□ -0.54
ATXN10-208	ENST00000476998	CAPN15	O75808	1086 aa		11.64	□□□□□ -0.55
ATXN10-208	ENST00000476998	KRT24	Q2M2I5	525 aa		11.64	□□□□□ -0.55
ATXN10-208	ENST00000476998	SLC10A5	Q5PT55	438 aa		11.64	□□□□□ -0.55
ATXN10-208	ENST00000476998	TNS4	Q8IZW8	715 aa		11.64	□□□□□ -0.55
ATXN10-208	ENST00000476998	GPC2	Q8N158	579 aa		11.64	□□□□□ -0.55
ATXN10-208	ENST00000476998	RPGR	Q92834	1020 aa	Known RBP	11.64	□□□□□ -0.55
ATXN10-208	ENST00000476998	CRAMP1	Q96RY5	1269 aa		11.64	□□□□□ -0.55
ATXN10-208	ENST00000476998	LTBP1	Q14766	1721 aa		11.63	□□□□□ -0.55
ATXN10-208	ENST00000476998	RIC1	Q4ADV7	1423 aa		11.63	□□□□□ -0.55
ATXN10-208	ENST00000476998	FMR1	Q06787	632 aa	Known RBP eCLIP	11.63	□□□□□ -0.55
ATXN10-208	ENST00000476998	MAP1S	Q66K74	1059 aa	Predicted RBP	11.63	□□□□□ -0.55
ATXN10-208	ENST00000476998	COPS6	Q7L5N1	327 aa		11.63	□□□□□ -0.55
ATXN10-208	ENST00000476998	CCDC146	Q8IYE0	955 aa		11.63	□□□□□ -0.55
ATXN10-208	ENST00000476998	CNTROB	Q8N137	903 aa		11.63	□□□□□ -0.55
ATXN10-208	ENST00000476998	ZNF428	Q96B54	188 aa		11.63	□□□□□ -0.55
ATXN10-208	ENST00000476998	RBM17	Q96I25	401 aa	Known RBP	11.63	□□□□□ -0.55
ATXN10-208	ENST00000476998	GJA3	Q9Y6H8	435 aa		11.63	□□□□□ -0.55
ATXN10-208	ENST00000476998	IBTK	Q9P2D0	1353 aa	Predicted RBP	11.63	□□□□□ -0.55
ATXN10-208	ENST00000476998	ERBB4	Q15303	1308 aa		11.62	□□□□□ -0.55
ATXN10-208	ENST00000476998	TMEM88B	A6NKF7	163 aa		11.62	□□□□□ -0.55
ATXN10-208	ENST00000476998	PPEF1	O14829	653 aa	Predicted RBP	11.62	□□□□□ -0.55
ATXN10-208	ENST00000476998	EPS15	P42566	896 aa		11.62	□□□□□ -0.55
ATXN10-208	ENST00000476998	VEGFB	P49765	207 aa		11.62	□□□□□ -0.55
ATXN10-208	ENST00000476998	AIMP1	Q12904	312 aa	Known RBP	11.62	□□□□□ -0.55
ATXN10-208	ENST00000476998	DDX10	Q13206	875 aa	Known RBP	11.62	□□□□□ -0.55
ATXN10-208	ENST00000476998	RALBP1	Q15311	655 aa		11.62	□□□□□ -0.55
ATXN10-208	ENST00000476998	NEUROD2	Q15784	382 aa		11.62	□□□□□ -0.55
ATXN10-208	ENST00000476998	CC2D2B	Q6DHV5	1058 aa		11.62	□□□□□ -0.55
ATXN10-208	ENST00000476998	PPP1R42	Q7Z4L9	355 aa		11.62	□□□□□ -0.55
ATXN10-208	ENST00000476998	JDP2	Q8WYK2	163 aa		11.62	□□□□□ -0.55
ATXN10-208	ENST00000476998	TRIM35	Q9UPQ4	493 aa		11.62	□□□□□ -0.55
ATXN10-208	ENST00000476998	CNTNAP1	P78357	1384 aa		11.62	□□□□□ -0.55
ATXN10-208	ENST00000476998	CHL1	O00533	1208 aa		11.61	□□□□□ -0.55
ATXN10-208	ENST00000476998	HCLS1	P14317	486 aa	Predicted RBP	11.61	□□□□□ -0.55
ATXN10-208	ENST00000476998	SCNN1D	P51172	638 aa		11.61	□□□□□ -0.55
ATXN10-208	ENST00000476998	PARP10	Q53GL7	1025 aa		11.61	□□□□□ -0.55
ATXN10-208	ENST00000476998	NLRP10	Q86W26	655 aa		11.61	□□□□□ -0.55
ATXN10-208	ENST00000476998	LARGE2	Q8N3Y3	721 aa		11.61	□□□□□ -0.55
ATXN10-208	ENST00000476998	XAGE3	Q8WTP9	111 aa		11.61	□□□□□ -0.55
ATXN10-208	ENST00000476998	NLRP3	Q96P20	1036 aa		11.61	□□□□□ -0.55
ATXN10-208	ENST00000476998	UTP14A	Q9BVJ6	771 aa	Known RBP	11.61	□□□□□ -0.55
ATXN10-208	ENST00000476998	BABAM1	Q9NWV8	329 aa		11.61	□□□□□ -0.55
ATXN10-208	ENST00000476998	TAF1	P21675	1872 aa		11.61	□□□□□ -0.55
ATXN10-208	ENST00000476998	LAMB2	P55268	1798 aa		11.6	□□□□□ -0.55
ATXN10-208	ENST00000476998	FOXN1	O15353	648 aa		11.6	□□□□□ -0.55
ATXN10-208	ENST00000476998	EIF6	P56537	245 aa	Known RBP	11.6	□□□□□ -0.55
ATXN10-208	ENST00000476998	PNMA8A	Q86V59	439 aa	Predicted RBP	11.6	□□□□□ -0.55
ATXN10-208	ENST00000476998	ATP6V0A2	Q9Y487	856 aa		11.6	□□□□□ -0.55
ATXN10-208	ENST00000476998	ABCC4	O15439	1325 aa		11.6	□□□□□ -0.55
ATXN10-208	ENST00000476998	TCIRG1	Q13488	830 aa		11.59	□□□□□ -0.55
ATXN10-208	ENST00000476998	AOC3	Q16853	763 aa		11.59	□□□□□ -0.55
ATXN10-208	ENST00000476998	ADAMTS8	Q9UP79	889 aa		11.59	□□□□□ -0.55
ATXN10-208	ENST00000476998	LAS1L	Q9Y4W2	734 aa	Known RBP	11.59	□□□□□ -0.55
ATXN10-208	ENST00000476998	PPIP5K2	O43314	1243 aa		11.58	□□□□□ -0.56
ATXN10-208	ENST00000476998	GRIPAP1	Q4V328	841 aa		11.58	□□□□□ -0.56
ATXN10-208	ENST00000476998	SP8	Q8IXZ3	490 aa		11.58	□□□□□ -0.56
ATXN10-208	ENST00000476998	RTFDC1	Q9BY42	306 aa	Predicted RBP	11.58	□□□□□ -0.56
ATXN10-208	ENST00000476998	DDX21	Q9NR30	783 aa	Known RBP eCLIP	11.58	□□□□□ -0.56
ATXN10-208	ENST00000476998	CHPF2	Q9P2E5	772 aa		11.58	□□□□□ -0.56
ATXN10-208	ENST00000476998	ANKRD36C	Q5JPF3	1778 aa		11.58	□□□□□ -0.56
ATXN10-208	ENST00000476998	RASSF10	A6NK89	507 aa		11.57	□□□□□ -0.56
ATXN10-208	ENST00000476998	TRAF5	O00463	557 aa		11.57	□□□□□ -0.56
ATXN10-208	ENST00000476998	BBOX1	O75936	387 aa		11.57	□□□□□ -0.56
ATXN10-208	ENST00000476998	CXCL9	Q07325	125 aa		11.57	□□□□□ -0.56
ATXN10-208	ENST00000476998	DEFB115	Q30KQ5	88 aa		11.57	□□□□□ -0.56
ATXN10-208	ENST00000476998	CST9	Q5W186	159 aa		11.57	□□□□□ -0.56
ATXN10-208	ENST00000476998	NIM1K	Q8IY84	436 aa		11.57	□□□□□ -0.56
ATXN10-208	ENST00000476998	RUNDC1	Q96C34	613 aa		11.57	□□□□□ -0.56
ATXN10-208	ENST00000476998	WBP1L	Q9NX94	342 aa		11.57	□□□□□ -0.56
ATXN10-208	ENST00000476998	TRMT112	Q9UI30	125 aa	Known RBP	11.57	□□□□□ -0.56
ATXN10-208	ENST00000476998	MYBBP1A	Q9BQG0	1328 aa	Known RBP	11.57	□□□□□ -0.56
ATXN10-208	ENST00000476998	COL4A1	P02462	1669 aa		11.56	□□□□□ -0.56
ATXN10-208	ENST00000476998	LMOD1	P29536	600 aa	Predicted RBP	11.56	□□□□□ -0.56
ATXN10-208	ENST00000476998	LMOD3	Q0VAK6	560 aa		11.56	□□□□□ -0.56
ATXN10-208	ENST00000476998	HSP90AB3P	Q58FF7	597 aa		11.56	□□□□□ -0.56
ATXN10-208	ENST00000476998	MPND	Q8N594	471 aa		11.56	□□□□□ -0.56
ATXN10-208	ENST00000476998	ZNRF3	Q9ULT6	936 aa		11.56	□□□□□ -0.56
ATXN10-208	ENST00000476998	ATP5J2-PTCD1	G3V325	749 aa		11.55	□□□□□ -0.56
ATXN10-208	ENST00000476998	DPP8	Q6V1X1	898 aa	Predicted RBP	11.55	□□□□□ -0.56
ATXN10-208	ENST00000476998	ANKRD13D	Q6ZTN6	518 aa		11.55	□□□□□ -0.56
ATXN10-208	ENST00000476998	USP50	Q70EL3	339 aa	Predicted RBP	11.55	□□□□□ -0.56
ATXN10-208	ENST00000476998	DDX46	Q7L014	1031 aa	Known RBP	11.55	□□□□□ -0.56

Retrieved 100 of 20,778 RNA–protein pairs in 192.3 ms