RNA–Protein interactions for RNA: ENST00000475955.1

SEMA3C-208, Transcript of semaphorin 3C, humanhuman

TSL 4

Gene SEMA3C, Length 383 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3C-208ENST00000475955 KLRG2A4D1S0 409 aaPredicted RBP12.16□□□□□ -0.46
SEMA3C-208ENST00000475955 NFKBIEO00221 500 aa12.16□□□□□ -0.46
SEMA3C-208ENST00000475955 ZNF34Q8IZ26 560 aa12.16□□□□□ -0.46
SEMA3C-208ENST00000475955 CFAP44Q96MT7 982 aa12.16□□□□□ -0.46
SEMA3C-208ENST00000475955 GPBP1L1Q9HC44 474 aaPredicted RBP12.16□□□□□ -0.46
SEMA3C-208ENST00000475955 MBIPQ9NS73 344 aa12.16□□□□□ -0.46
SEMA3C-208ENST00000475955 TAF1P21675 1872 aa12.16□□□□□ -0.46
SEMA3C-208ENST00000475955 ABCC12Q96J65 1359 aa12.16□□□□□ -0.46
SEMA3C-208ENST00000475955 KIF3CO14782 793 aa12.15□□□□□ -0.46
SEMA3C-208ENST00000475955 GPTP24298 496 aa12.15□□□□□ -0.46
SEMA3C-208ENST00000475955 ST5P78524 1137 aa12.15□□□□□ -0.46
SEMA3C-208ENST00000475955 PDE3AQ14432 1141 aa12.15□□□□□ -0.46
SEMA3C-208ENST00000475955 TPTE2Q6XPS3 522 aa12.15□□□□□ -0.46
SEMA3C-208ENST00000475955 KIF6Q6ZMV9 814 aa12.15□□□□□ -0.46
SEMA3C-208ENST00000475955 NUTM1Q86Y26 1132 aa12.15□□□□□ -0.46
SEMA3C-208ENST00000475955 ZNF219Q9P2Y4 722 aaPredicted RBP12.15□□□□□ -0.46
SEMA3C-208ENST00000475955 C21orf2O43822 256 aa12.14□□□□□ -0.47
SEMA3C-208ENST00000475955 ERFEQ4G0M1 354 aa12.14□□□□□ -0.47
SEMA3C-208ENST00000475955 SUSD4Q5VX71 490 aa12.14□□□□□ -0.47
SEMA3C-208ENST00000475955 STYK1Q6J9G0 422 aa12.14□□□□□ -0.47
SEMA3C-208ENST00000475955 GIGYF2Q6Y7W6 1299 aaKnown RBP12.14□□□□□ -0.47
SEMA3C-208ENST00000475955 COPS6Q7L5N1 327 aa12.14□□□□□ -0.47
SEMA3C-208ENST00000475955 RNF181Q9P0P0 153 aa12.14□□□□□ -0.47
SEMA3C-208ENST00000475955 PDZRN3Q9UPQ7 1066 aa12.14□□□□□ -0.47
SEMA3C-208ENST00000475955 NPHP1O15259 732 aa12.13□□□□□ -0.47
SEMA3C-208ENST00000475955 PRPF40BQ6NWY9 871 aaKnown RBP12.13□□□□□ -0.47
SEMA3C-208ENST00000475955 XAGE3Q8WTP9 111 aa12.13□□□□□ -0.47
SEMA3C-208ENST00000475955 C7orf43Q8WVR3 580 aa12.13□□□□□ -0.47
SEMA3C-208ENST00000475955 MASTLQ96GX5 879 aa12.13□□□□□ -0.47
SEMA3C-208ENST00000475955 NMRK2Q9NPI5 230 aa12.13□□□□□ -0.47
SEMA3C-208ENST00000475955 DDX21Q9NR30 783 aaKnown RBP eCLIP12.13□□□□□ -0.47
SEMA3C-208ENST00000475955 CHPF2Q9P2E5 772 aa12.13□□□□□ -0.47
SEMA3C-208ENST00000475955 DDX60Q8IY21 1712 aaKnown RBP12.12□□□□□ -0.47
SEMA3C-208ENST00000475955 PLIN1O60240 522 aa12.12□□□□□ -0.47
SEMA3C-208ENST00000475955 NTSR2O95665 410 aa12.12□□□□□ -0.47
SEMA3C-208ENST00000475955 AIMP1Q12904 312 aaKnown RBP12.12□□□□□ -0.47
SEMA3C-208ENST00000475955 OLFM4Q6UX06 510 aa12.12□□□□□ -0.47
SEMA3C-208ENST00000475955 C3orf67Q6ZVT6 689 aa12.12□□□□□ -0.47
SEMA3C-208ENST00000475955 SLC51AQ86UW1 340 aa12.12□□□□□ -0.47
SEMA3C-208ENST00000475955 CNKSR1Q969H4 720 aa12.12□□□□□ -0.47
SEMA3C-208ENST00000475955 IFT57Q9NWB7 429 aa12.12□□□□□ -0.47
SEMA3C-208ENST00000475955 IBTKQ9P2D0 1353 aaPredicted RBP12.12□□□□□ -0.47
SEMA3C-208ENST00000475955 HOXB7P09629 217 aa12.11□□□□□ -0.47
SEMA3C-208ENST00000475955 NPR1P16066 1061 aa12.11□□□□□ -0.47
SEMA3C-208ENST00000475955 LMNB1P20700 586 aa12.11□□□□□ -0.47
SEMA3C-208ENST00000475955 CRY2Q49AN0 593 aa12.11□□□□□ -0.47
SEMA3C-208ENST00000475955 HDGFL1Q5TGJ6 251 aa12.11□□□□□ -0.47
SEMA3C-208ENST00000475955 C8orf58Q8NAV2 365 aa12.11□□□□□ -0.47
SEMA3C-208ENST00000475955 RIC1Q4ADV7 1423 aa12.11□□□□□ -0.47
SEMA3C-208ENST00000475955 ELL2O00472 640 aaPredicted RBP12.1□□□□□ -0.47
SEMA3C-208ENST00000475955 GNAI1P63096 354 aa12.1□□□□□ -0.47
SEMA3C-208ENST00000475955 SYNE4Q8N205 404 aa12.1□□□□□ -0.47
SEMA3C-208ENST00000475955 ZNF428Q96B54 188 aa12.1□□□□□ -0.47
SEMA3C-208ENST00000475955 NYXQ9GZU5 481 aa12.1□□□□□ -0.47
SEMA3C-208ENST00000475955 SNED1Q8TER0 1413 aa12.1□□□□□ -0.47
SEMA3C-208ENST00000475955 GTF2E1P29083 439 aaPredicted RBP12.09□□□□□ -0.47
SEMA3C-208ENST00000475955 WWC1Q8IX03 1113 aa12.09□□□□□ -0.47
SEMA3C-208ENST00000475955 TSPYL6Q8N831 410 aa12.09□□□□□ -0.47
SEMA3C-208ENST00000475955 LTBP3Q9NS15 1303 aa12.09□□□□□ -0.47
SEMA3C-208ENST00000475955 CACNA1FO60840 1977 aa12.09□□□□□ -0.47
SEMA3C-208ENST00000475955 COL4A1P02462 1669 aa12.08□□□□□ -0.48
SEMA3C-208ENST00000475955 TCIRG1Q13488 830 aa12.08□□□□□ -0.48
SEMA3C-208ENST00000475955 CCDC27Q2M243 656 aa12.08□□□□□ -0.48
SEMA3C-208ENST00000475955 SLC10A5Q5PT55 438 aa12.08□□□□□ -0.48
SEMA3C-208ENST00000475955 NLRP10Q86W26 655 aa12.08□□□□□ -0.48
SEMA3C-208ENST00000475955 TSR2Q969E8 191 aaKnown RBP12.08□□□□□ -0.48
SEMA3C-208ENST00000475955 DBF4Q9UBU7 674 aaPredicted RBP12.08□□□□□ -0.48
SEMA3C-208ENST00000475955 HOXA10P31260 410 aaPredicted RBP12.07□□□□□ -0.48
SEMA3C-208ENST00000475955 CALD1Q05682 793 aaKnown RBP12.07□□□□□ -0.48
SEMA3C-208ENST00000475955 PARP10Q53GL7 1025 aa12.07□□□□□ -0.48
SEMA3C-208ENST00000475955 WDR63Q8IWG1 891 aa12.07□□□□□ -0.48
SEMA3C-208ENST00000475955 PLBD2Q8NHP8 589 aa12.07□□□□□ -0.48
SEMA3C-208ENST00000475955 WDR90Q96KV7 1748 aa12.07□□□□□ -0.48
SEMA3C-208ENST00000475955 UTP14AQ9BVJ6 771 aaKnown RBP12.07□□□□□ -0.48
SEMA3C-208ENST00000475955 TAOK3Q9H2K8 898 aa12.07□□□□□ -0.48
SEMA3C-208ENST00000475955 PHAXQ9H814 394 aaKnown RBP12.07□□□□□ -0.48
SEMA3C-208ENST00000475955 RRAGCQ9HB90 399 aa12.07□□□□□ -0.48
SEMA3C-208ENST00000475955 COL4A5P29400 1685 aa12.06□□□□□ -0.48
SEMA3C-208ENST00000475955 POTECB2RU33 542 aa12.06□□□□□ -0.48
SEMA3C-208ENST00000475955 CT47B1P0C2W7 299 aaPredicted RBP12.06□□□□□ -0.48
SEMA3C-208ENST00000475955 BECN1Q14457 450 aa12.06□□□□□ -0.48
SEMA3C-208ENST00000475955 ANKRD13DQ6ZTN6 518 aa12.06□□□□□ -0.48
SEMA3C-208ENST00000475955 PPP1R42Q7Z4L9 355 aa12.06□□□□□ -0.48
SEMA3C-208ENST00000475955 ISCA1Q9BUE6 129 aa12.06□□□□□ -0.48
SEMA3C-208ENST00000475955 HYPKQ9NX55 129 aa12.06□□□□□ -0.48
SEMA3C-208ENST00000475955 ZC3H4Q9UPT8 1303 aaKnown RBP12.06□□□□□ -0.48
SEMA3C-208ENST00000475955 CEP350Q5VT06 3117 aa12.06□□□□□ -0.48
SEMA3C-208ENST00000475955 GLTPD2A6NH11 291 aa12.05□□□□□ -0.48
SEMA3C-208ENST00000475955 ATP5J2-PTCD1G3V325 749 aa12.05□□□□□ -0.48
SEMA3C-208ENST00000475955 HCLS1P14317 486 aaPredicted RBP12.05□□□□□ -0.48
SEMA3C-208ENST00000475955 ALDH1B1P30837 517 aa12.05□□□□□ -0.48
SEMA3C-208ENST00000475955 C8orf34Q49A92 452 aa12.05□□□□□ -0.48
SEMA3C-208ENST00000475955 CCDC93Q567U6 631 aa12.05□□□□□ -0.48
SEMA3C-208ENST00000475955 HSP90AB3PQ58FF7 597 aa12.05□□□□□ -0.48
SEMA3C-208ENST00000475955 C20orf194Q5TEA3 1177 aa12.05□□□□□ -0.48
SEMA3C-208ENST00000475955 TOMM70O94826 608 aa12.04□□□□□ -0.48
SEMA3C-208ENST00000475955 FKBP4Q02790 459 aaKnown RBP eCLIP12.04□□□□□ -0.48
SEMA3C-208ENST00000475955 SOGA3Q5TF21 947 aa12.04□□□□□ -0.48
SEMA3C-208ENST00000475955 CRAMP1Q96RY5 1269 aa12.04□□□□□ -0.48
SEMA3C-208ENST00000475955 UPF2Q9HAU5 1272 aaKnown RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms