RNA–Protein interactions for RNA: ENST00000475158.1

CDH23-211, Transcript of cadherin related 23, humanhuman

TSL 1 (best)

Gene CDH23, Length 4,114 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-211ENST00000475158 USP48Q86UV5 1035 aa11.24□□□□□ -0.61
CDH23-211ENST00000475158 CHAMP1Q96JM3 812 aa11.24□□□□□ -0.61
CDH23-211ENST00000475158 MAGI2Q86UL8 1455 aa11.24□□□□□ -0.61
CDH23-211ENST00000475158 ADCY5O95622 1261 aa11.24□□□□□ -0.61
CDH23-211ENST00000475158 TNNT1P13805 278 aa11.24□□□□□ -0.61
CDH23-211ENST00000475158 AKAP4Q5JQC9 854 aa11.24□□□□□ -0.61
CDH23-211ENST00000475158 CAGE1Q8TC20 777 aa11.24□□□□□ -0.61
CDH23-211ENST00000475158 NGLY1Q96IV0 654 aa11.24□□□□□ -0.61
CDH23-211ENST00000475158 CCDC94Q9BW85 323 aaPredicted RBP11.24□□□□□ -0.61
CDH23-211ENST00000475158 CDKL5O76039 1030 aa11.23□□□□□ -0.61
CDH23-211ENST00000475158 ZNF165P49910 485 aa11.23□□□□□ -0.61
CDH23-211ENST00000475158 AK2P54819 239 aa11.23□□□□□ -0.61
CDH23-211ENST00000475158 MAP3K12Q12852 859 aa11.23□□□□□ -0.61
CDH23-211ENST00000475158 CADPS2Q86UW7 1296 aa11.23□□□□□ -0.61
CDH23-211ENST00000475158 LINS1Q8NG48 757 aa11.23□□□□□ -0.61
CDH23-211ENST00000475158 TIGD1Q96MW7 591 aa11.23□□□□□ -0.61
CDH23-211ENST00000475158 CALCOCO1Q9P1Z2 691 aa11.23□□□□□ -0.61
CDH23-211ENST00000475158 ANKIB1Q9P2G1 1089 aa11.23□□□□□ -0.61
CDH23-211ENST00000475158 CHMLP26374 656 aa11.23□□□□□ -0.61
CDH23-211ENST00000475158 CCDC70Q6NSX1 233 aa11.23□□□□□ -0.61
CDH23-211ENST00000475158 PHF23Q9BUL5 403 aaPredicted RBP11.23□□□□□ -0.61
CDH23-211ENST00000475158 SBNO2Q9Y2G9 1366 aa11.23□□□□□ -0.61
CDH23-211ENST00000475158 ZCRB1Q8TBF4 217 aaKnown RBP11.23□□□□□ -0.61
CDH23-211ENST00000475158 IPO4Q8TEX9 1081 aaKnown RBP11.23□□□□□ -0.61
CDH23-211ENST00000475158 CPLX3Q8WVH0 158 aa11.23□□□□□ -0.61
CDH23-211ENST00000475158 USP26Q9BXU7 913 aa11.23□□□□□ -0.61
CDH23-211ENST00000475158 KCNQ3O43525 872 aa11.22□□□□□ -0.61
CDH23-211ENST00000475158 TRMT1LQ7Z2T5 733 aaKnown RBP11.22□□□□□ -0.61
CDH23-211ENST00000475158 BICC1Q9H694 974 aaKnown RBP11.22□□□□□ -0.61
CDH23-211ENST00000475158 ARGLU1Q9NWB6 273 aaPredicted RBP11.22□□□□□ -0.61
CDH23-211ENST00000475158 RXRAP19793 462 aa11.22□□□□□ -0.61
CDH23-211ENST00000475158 PPFIBP1Q86W92 1011 aa11.22□□□□□ -0.61
CDH23-211ENST00000475158 GTPBP4Q9BZE4 634 aaKnown RBP11.22□□□□□ -0.61
CDH23-211ENST00000475158 SLC12A7Q9Y666 1083 aa11.22□□□□□ -0.61
CDH23-211ENST00000475158 ADGRL2O95490 1459 aa11.22□□□□□ -0.61
CDH23-211ENST00000475158 KLF18A0A0U1RQI7 1052 aa11.22□□□□□ -0.61
CDH23-211ENST00000475158 GOLGA8AA7E2F4 631 aa11.22□□□□□ -0.61
CDH23-211ENST00000475158 CHL1O00533 1208 aa11.22□□□□□ -0.61
CDH23-211ENST00000475158 ZSCAN22P10073 491 aaPredicted RBP11.22□□□□□ -0.61
CDH23-211ENST00000475158 TANGO6Q9C0B7 1094 aa11.22□□□□□ -0.61
CDH23-211ENST00000475158 DEF6Q9H4E7 631 aa11.22□□□□□ -0.61
CDH23-211ENST00000475158 TTC12Q9H892 705 aaPredicted RBP11.22□□□□□ -0.61
CDH23-211ENST00000475158 MKNK2Q9HBH9 465 aa11.22□□□□□ -0.61
CDH23-211ENST00000475158 JAG2Q9Y219 1238 aa11.22□□□□□ -0.61
CDH23-211ENST00000475158 LTKP29376 864 aa11.21□□□□□ -0.61
CDH23-211ENST00000475158 GTF2F1P35269 517 aaKnown RBP eCLIP11.21□□□□□ -0.61
CDH23-211ENST00000475158 CCDC129Q6ZRS4 1044 aa11.21□□□□□ -0.61
CDH23-211ENST00000475158 EDC3Q96F86 508 aaKnown RBP11.21□□□□□ -0.61
CDH23-211ENST00000475158 CAVIN4Q5BKX8 364 aa11.21□□□□□ -0.61
CDH23-211ENST00000475158 SOGA3Q5TF21 947 aa11.21□□□□□ -0.61
CDH23-211ENST00000475158 NBPF6Q5VWK0 638 aa11.21□□□□□ -0.61
CDH23-211ENST00000475158 ZBTB9Q96C00 473 aa11.21□□□□□ -0.61
CDH23-211ENST00000475158 NBPF4Q96M43 638 aa11.21□□□□□ -0.61
CDH23-211ENST00000475158 DACT1Q9NYF0 836 aa11.21□□□□□ -0.61
CDH23-211ENST00000475158 ABCC2Q92887 1545 aa11.21□□□□□ -0.61
CDH23-211ENST00000475158 SOS1Q07889 1333 aaPredicted RBP11.21□□□□□ -0.61
CDH23-211ENST00000475158 ZPR1O75312 459 aa11.21□□□□□ -0.62
CDH23-211ENST00000475158 TFCP2Q12800 502 aa11.21□□□□□ -0.62
CDH23-211ENST00000475158 ZFYVE27Q5T4F4 411 aa11.21□□□□□ -0.62
CDH23-211ENST00000475158 Q6ZUG5 572 aa11.21□□□□□ -0.62
CDH23-211ENST00000475158 MAGEC2Q9UBF1 373 aaPredicted RBP11.21□□□□□ -0.62
CDH23-211ENST00000475158 TMEM67Q5HYA8 995 aa11.2□□□□□ -0.62
CDH23-211ENST00000475158 CCAR1Q8IX12 1150 aaKnown RBP11.2□□□□□ -0.62
CDH23-211ENST00000475158 FAM89AQ96GI7 184 aa11.2□□□□□ -0.62
CDH23-211ENST00000475158 ZFP91Q96JP5 570 aaPredicted RBP11.2□□□□□ -0.62
CDH23-211ENST00000475158 CLIP2Q9UDT6 1046 aa11.2□□□□□ -0.62
CDH23-211ENST00000475158 WWC3Q9ULE0 1092 aa11.2□□□□□ -0.62
CDH23-211ENST00000475158 USP19O94966 1318 aa11.2□□□□□ -0.62
CDH23-211ENST00000475158 DZIP1Q86YF9 867 aaKnown RBP11.2□□□□□ -0.62
CDH23-211ENST00000475158 VAT1LQ9HCJ6 419 aa11.2□□□□□ -0.62
CDH23-211ENST00000475158 SAMD9Q5K651 1589 aa11.2□□□□□ -0.62
CDH23-211ENST00000475158 UGGT1Q9NYU2 1555 aa11.2□□□□□ -0.62
CDH23-211ENST00000475158 SFPQP23246 707 aaKnown RBP eCLIP11.2□□□□□ -0.62
CDH23-211ENST00000475158 MARCKSP29966 332 aaPredicted RBP11.2□□□□□ -0.62
CDH23-211ENST00000475158 ATP2B3Q16720 1220 aa11.2□□□□□ -0.62
CDH23-211ENST00000475158 SLC9C2Q5TAH2 1124 aa11.2□□□□□ -0.62
CDH23-211ENST00000475158 ZNF526Q8TF50 670 aaPredicted RBP11.2□□□□□ -0.62
CDH23-211ENST00000475158 SLC26A6Q9BXS9 759 aa11.2□□□□□ -0.62
CDH23-211ENST00000475158 NOL7Q9UMY1 257 aaKnown RBP11.2□□□□□ -0.62
CDH23-211ENST00000475158 MBD5Q9P267 1494 aa11.2□□□□□ -0.62
CDH23-211ENST00000475158 ABCA5Q8WWZ7 1642 aa11.2□□□□□ -0.62
CDH23-211ENST00000475158 MPHOSPH10O00566 681 aaKnown RBP11.2□□□□□ -0.62
CDH23-211ENST00000475158 UBE2HP62256 183 aa11.2□□□□□ -0.62
CDH23-211ENST00000475158 RAB3GAP1Q15042 981 aa11.2□□□□□ -0.62
CDH23-211ENST00000475158 SNX21Q969T3 373 aa11.2□□□□□ -0.62
CDH23-211ENST00000475158 PUS7Q96PZ0 661 aaKnown RBP11.2□□□□□ -0.62
CDH23-211ENST00000475158 KIF20AO95235 890 aa11.19□□□□□ -0.62
CDH23-211ENST00000475158 SLC5A1P13866 664 aa11.19□□□□□ -0.62
CDH23-211ENST00000475158 IARSP41252 1262 aaKnown RBP11.19□□□□□ -0.62
CDH23-211ENST00000475158 HSP90B2PQ58FF3 399 aa11.19□□□□□ -0.62
CDH23-211ENST00000475158 CERS3Q8IU89 383 aa11.19□□□□□ -0.62
CDH23-211ENST00000475158 ZNF594Q96JF6 807 aaPredicted RBP11.19□□□□□ -0.62
CDH23-211ENST00000475158 FAM227BQ96M60 508 aa11.19□□□□□ -0.62
CDH23-211ENST00000475158 MAP3K5Q99683 1374 aa11.19□□□□□ -0.62
CDH23-211ENST00000475158 ENOX2Q16206 610 aaKnown RBP11.19□□□□□ -0.62
CDH23-211ENST00000475158 CT47A1Q5JQC4 288 aaPredicted RBP11.19□□□□□ -0.62
CDH23-211ENST00000475158 RNMTO43148 476 aaKnown RBP11.19□□□□□ -0.62
CDH23-211ENST00000475158 A1BGP04217 495 aa11.19□□□□□ -0.62
CDH23-211ENST00000475158 APOBRQ0VD83 1088 aa11.19□□□□□ -0.62
CDH23-211ENST00000475158 TSC1Q92574 1164 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms