RNA–Protein interactions for RNA: ENST00000474896.1

SRRT-209, Transcript of serrate, RNA effector molecule, humanhuman

TSL 3

Gene SRRT, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-209ENST00000474896 CC2D2BQ6DHV5 1058 aa20.62■□□□□ 0.89
SRRT-209ENST00000474896 PNMA8AQ86V59 439 aaPredicted RBP20.62■□□□□ 0.89
SRRT-209ENST00000474896 GPC2Q8N158 579 aa20.62■□□□□ 0.89
SRRT-209ENST00000474896 PNNQ9H307 717 aaKnown RBP20.62■□□□□ 0.89
SRRT-209ENST00000474896 UBN2Q6ZU65 1347 aa20.61■□□□□ 0.89
SRRT-209ENST00000474896 HOXA10P31260 410 aaPredicted RBP20.61■□□□□ 0.89
SRRT-209ENST00000474896 ZNF34Q8IZ26 560 aa20.61■□□□□ 0.89
SRRT-209ENST00000474896 CNTROBQ8N137 903 aa20.61■□□□□ 0.89
SRRT-209ENST00000474896 RBM17Q96I25 401 aaKnown RBP20.61■□□□□ 0.89
SRRT-209ENST00000474896 KDM3BQ7LBC6 1761 aa20.61■□□□□ 0.89
SRRT-209ENST00000474896 TCERG1O14776 1098 aaKnown RBP20.6■□□□□ 0.89
SRRT-209ENST00000474896 VEGFBP49765 207 aa20.6■□□□□ 0.89
SRRT-209ENST00000474896 EIF6P56537 245 aaKnown RBP20.6■□□□□ 0.89
SRRT-209ENST00000474896 MAP1SQ66K74 1059 aaPredicted RBP20.6■□□□□ 0.89
SRRT-209ENST00000474896 GJA3Q9Y6H8 435 aa20.6■□□□□ 0.89
SRRT-209ENST00000474896 MAPK8IP3Q9UPT6 1336 aa20.59■□□□□ 0.89
SRRT-209ENST00000474896 GIGYF2Q6Y7W6 1299 aaKnown RBP20.59■□□□□ 0.89
SRRT-209ENST00000474896 CRAMP1Q96RY5 1269 aa20.59■□□□□ 0.89
SRRT-209ENST00000474896 FOXN1O15353 648 aa20.58■□□□□ 0.89
SRRT-209ENST00000474896 GRIPAP1Q4V328 841 aa20.58■□□□□ 0.89
SRRT-209ENST00000474896 PPP1R42Q7Z4L9 355 aa20.58■□□□□ 0.89
SRRT-209ENST00000474896 TSPYL4Q9UJ04 414 aa20.58■□□□□ 0.89
SRRT-209ENST00000474896 SNED1Q8TER0 1413 aa20.58■□□□□ 0.88
SRRT-209ENST00000474896 NTSR2O95665 410 aa20.57■□□□□ 0.88
SRRT-209ENST00000474896 EIF2S2P20042 333 aaKnown RBP20.57■□□□□ 0.88
SRRT-209ENST00000474896 C3orf67Q6ZVT6 689 aa20.57■□□□□ 0.88
SRRT-209ENST00000474896 SLC51AQ86UW1 340 aa20.57■□□□□ 0.88
SRRT-209ENST00000474896 LARGE2Q8N3Y3 721 aa20.57■□□□□ 0.88
SRRT-209ENST00000474896 IBTKQ9P2D0 1353 aaPredicted RBP20.57■□□□□ 0.88
SRRT-209ENST00000474896 ERBB4Q15303 1308 aa20.56■□□□□ 0.88
SRRT-209ENST00000474896 PPEF1O14829 653 aaPredicted RBP20.56■□□□□ 0.88
SRRT-209ENST00000474896 NLRP3Q96P20 1036 aa20.56■□□□□ 0.88
SRRT-209ENST00000474896 LMOD1P29536 600 aaPredicted RBP20.55■□□□□ 0.88
SRRT-209ENST00000474896 RIPK4P57078 832 aa20.55■□□□□ 0.88
SRRT-209ENST00000474896 PDIA6Q15084 440 aa20.55■□□□□ 0.88
SRRT-209ENST00000474896 DEFB115Q30KQ5 88 aa20.55■□□□□ 0.88
SRRT-209ENST00000474896 PARP10Q53GL7 1025 aa20.55■□□□□ 0.88
SRRT-209ENST00000474896 AIDAQ96BJ3 306 aa20.55■□□□□ 0.88
SRRT-209ENST00000474896 ADAMTSL1Q8N6G6 1762 aa20.54■□□□□ 0.88
SRRT-209ENST00000474896 RIC1Q4ADV7 1423 aa20.54■□□□□ 0.88
SRRT-209ENST00000474896 EPS15P42566 896 aa20.54■□□□□ 0.88
SRRT-209ENST00000474896 LRP10Q7Z4F1 713 aa20.54■□□□□ 0.88
SRRT-209ENST00000474896 UTP14AQ9BVJ6 771 aaKnown RBP20.54■□□□□ 0.88
SRRT-209ENST00000474896 COL4A5P29400 1685 aa20.54■□□□□ 0.88
SRRT-209ENST00000474896 ANXA1P04083 346 aa20.53■□□□□ 0.88
SRRT-209ENST00000474896 CTCFP49711 727 aaPredicted RBP20.53■□□□□ 0.88
SRRT-209ENST00000474896 SLC10A5Q5PT55 438 aa20.53■□□□□ 0.88
SRRT-209ENST00000474896 TMX4Q9H1E5 349 aaPredicted RBP20.53■□□□□ 0.88
SRRT-209ENST00000474896 RASSF10A6NK89 507 aa20.52■□□□□ 0.88
SRRT-209ENST00000474896 SCNN1DP51172 638 aa20.52■□□□□ 0.88
SRRT-209ENST00000474896 PROSER3Q2NL68 480 aa20.52■□□□□ 0.88
SRRT-209ENST00000474896 NIM1KQ8IY84 436 aa20.52■□□□□ 0.88
SRRT-209ENST00000474896 PRDM10Q9NQV6 1147 aa20.52■□□□□ 0.88
SRRT-209ENST00000474896 DDX21Q9NR30 783 aaKnown RBP eCLIP20.52■□□□□ 0.88
SRRT-209ENST00000474896 WBP1LQ9NX94 342 aa20.52■□□□□ 0.88
SRRT-209ENST00000474896 ABT1Q9ULW3 272 aaKnown RBP20.52■□□□□ 0.88
SRRT-209ENST00000474896 PPIP5K2O43314 1243 aa20.51■□□□□ 0.87
SRRT-209ENST00000474896 NECTIN2Q92692 538 aa20.51■□□□□ 0.87
SRRT-209ENST00000474896 ATP6V0A2Q9Y487 856 aa20.51■□□□□ 0.87
SRRT-209ENST00000474896 FMR1Q06787 632 aaKnown RBP eCLIP20.5■□□□□ 0.87
SRRT-209ENST00000474896 AIMP1Q12904 312 aaKnown RBP20.5■□□□□ 0.87
SRRT-209ENST00000474896 AOC3Q16853 763 aa20.5■□□□□ 0.87
SRRT-209ENST00000474896 COPS6Q7L5N1 327 aa20.5■□□□□ 0.87
SRRT-209ENST00000474896 BABAM1Q9NWV8 329 aa20.5■□□□□ 0.87
SRRT-209ENST00000474896 WDR33Q9C0J8 1336 aaKnown RBP20.5■□□□□ 0.87
SRRT-209ENST00000474896 TMPOP42166 694 aaKnown RBP20.49■□□□□ 0.87
SRRT-209ENST00000474896 USP50Q70EL3 339 aaPredicted RBP20.49■□□□□ 0.87
SRRT-209ENST00000474896 VPS33BQ9H267 617 aa20.49■□□□□ 0.87
SRRT-209ENST00000474896 LTBP1Q14766 1721 aa20.49■□□□□ 0.87
SRRT-209ENST00000474896 BBOX1O75936 387 aa20.48■□□□□ 0.87
SRRT-209ENST00000474896 HCLS1P14317 486 aaPredicted RBP20.48■□□□□ 0.87
SRRT-209ENST00000474896 LBX1P52954 281 aa20.48■□□□□ 0.87
SRRT-209ENST00000474896 XAGE3Q8WTP9 111 aa20.48■□□□□ 0.87
SRRT-209ENST00000474896 ABCC4O15439 1325 aa20.48■□□□□ 0.87
SRRT-209ENST00000474896 NLRP10Q86W26 655 aa20.47■□□□□ 0.87
SRRT-209ENST00000474896 SP8Q8IXZ3 490 aa20.47■□□□□ 0.87
SRRT-209ENST00000474896 SUPT20HQ8NEM7 779 aa20.47■□□□□ 0.87
SRRT-209ENST00000474896 ZNRF3Q9ULT6 936 aa20.47■□□□□ 0.87
SRRT-209ENST00000474896 MAP2K1Q02750 393 aaPredicted RBP20.46■□□□□ 0.87
SRRT-209ENST00000474896 CXCL9Q07325 125 aa20.46■□□□□ 0.87
SRRT-209ENST00000474896 LMOD3Q0VAK6 560 aa20.46■□□□□ 0.87
SRRT-209ENST00000474896 RALBP1Q15311 655 aa20.46■□□□□ 0.87
SRRT-209ENST00000474896 NEUROD2Q15784 382 aa20.46■□□□□ 0.87
SRRT-209ENST00000474896 HSP90AB3PQ58FF7 597 aa20.46■□□□□ 0.87
SRRT-209ENST00000474896 RTFDC1Q9BY42 306 aaPredicted RBP20.46■□□□□ 0.87
SRRT-209ENST00000474896 TRAF5O00463 557 aa20.45■□□□□ 0.86
SRRT-209ENST00000474896 TCIRG1Q13488 830 aa20.45■□□□□ 0.86
SRRT-209ENST00000474896 CST9Q5W186 159 aa20.45■□□□□ 0.86
SRRT-209ENST00000474896 DPP8Q6V1X1 898 aaPredicted RBP20.45■□□□□ 0.86
SRRT-209ENST00000474896 MPNDQ8N594 471 aa20.45■□□□□ 0.86
SRRT-209ENST00000474896 GPRC5DQ9NZD1 345 aa20.45■□□□□ 0.86
SRRT-209ENST00000474896 TRMT112Q9UI30 125 aaKnown RBP20.45■□□□□ 0.86
SRRT-209ENST00000474896 PAXIP1Q6ZW49 1069 aaPredicted RBP20.44■□□□□ 0.86
SRRT-209ENST00000474896 DDX46Q7L014 1031 aaKnown RBP20.44■□□□□ 0.86
SRRT-209ENST00000474896 ADARB2Q9NS39 739 aaKnown RBP20.44■□□□□ 0.86
SRRT-209ENST00000474896 KRT24Q2M2I5 525 aa20.43■□□□□ 0.86
SRRT-209ENST00000474896 CCDC146Q8IYE0 955 aa20.43■□□□□ 0.86
SRRT-209ENST00000474896 ZNF428Q96B54 188 aa20.43■□□□□ 0.86
SRRT-209ENST00000474896 LAS1LQ9Y4W2 734 aaKnown RBP20.43■□□□□ 0.86
SRRT-209ENST00000474896 CHL1O00533 1208 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms