RNA–Protein interactions for RNA: ENST00000472659.1

PKD1-209, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 3

Gene PKD1, Length 661 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-209ENST00000472659 C7orf43Q8WVR3 580 aa24.08■■□□□ 1.45
PKD1-209ENST00000472659 RNF181Q9P0P0 153 aa24.08■■□□□ 1.45
PKD1-209ENST00000472659 RNF123Q5XPI4 1314 aa24.08■■□□□ 1.44
PKD1-209ENST00000472659 ZNF526Q8TF50 670 aaPredicted RBP24.07■■□□□ 1.44
PKD1-209ENST00000472659 HSPA6P17066 643 aa24.06■■□□□ 1.44
PKD1-209ENST00000472659 ANKRD13DQ6ZTN6 518 aa24.06■■□□□ 1.44
PKD1-209ENST00000472659 WDR63Q8IWG1 891 aa24.06■■□□□ 1.44
PKD1-209ENST00000472659 UTP14AQ9BVJ6 771 aaKnown RBP24.06■■□□□ 1.44
PKD1-209ENST00000472659 ZNF219Q9P2Y4 722 aaPredicted RBP24.06■■□□□ 1.44
PKD1-209ENST00000472659 TIAM2Q8IVF5 1701 aa24.06■■□□□ 1.44
PKD1-209ENST00000472659 LTBP3Q9NS15 1303 aa24.06■■□□□ 1.44
PKD1-209ENST00000472659 LMNB1P20700 586 aa24.05■■□□□ 1.44
PKD1-209ENST00000472659 FANCIQ9NVI1 1328 aa24.05■■□□□ 1.44
PKD1-209ENST00000472659 HOXA10P31260 410 aaPredicted RBP24.04■■□□□ 1.44
PKD1-209ENST00000472659 SLC10A5Q5PT55 438 aa24.04■■□□□ 1.44
PKD1-209ENST00000472659 C3orf67Q6ZVT6 689 aa24.04■■□□□ 1.44
PKD1-209ENST00000472659 SALL2Q9Y467 1007 aaPredicted RBP24.04■■□□□ 1.44
PKD1-209ENST00000472659 SNED1Q8TER0 1413 aa24.03■■□□□ 1.44
PKD1-209ENST00000472659 SOGA3Q5TF21 947 aa24.03■■□□□ 1.44
PKD1-209ENST00000472659 CCDC30Q5VVM6 783 aa24.03■■□□□ 1.44
PKD1-209ENST00000472659 ISCA1Q9BUE6 129 aa24.03■■□□□ 1.44
PKD1-209ENST00000472659 PHAXQ9H814 394 aaKnown RBP24.03■■□□□ 1.44
PKD1-209ENST00000472659 ZC3H4Q9UPT8 1303 aaKnown RBP24.03■■□□□ 1.44
PKD1-209ENST00000472659 LAMB2P55268 1798 aa24.03■■□□□ 1.44
PKD1-209ENST00000472659 CCDC88AQ3V6T2 1871 aa24.02■■□□□ 1.44
PKD1-209ENST00000472659 TOMM70O94826 608 aa24.02■■□□□ 1.44
PKD1-209ENST00000472659 CHMP4AQ9BY43 222 aa24.02■■□□□ 1.44
PKD1-209ENST00000472659 ALDH1B1P30837 517 aa24.01■■□□□ 1.43
PKD1-209ENST00000472659 TWISTNBQ3B726 338 aaPredicted RBP24.01■■□□□ 1.43
PKD1-209ENST00000472659 TAOK3Q9H2K8 898 aa24.01■■□□□ 1.43
PKD1-209ENST00000472659 DICER1Q9UPY3 1922 aaKnown RBP24■■□□□ 1.43
PKD1-209ENST00000472659 SPINK5Q9NQ38 1064 aaPredicted RBP24■■□□□ 1.43
PKD1-209ENST00000472659 DDX60Q8IY21 1712 aaKnown RBP24■■□□□ 1.43
PKD1-209ENST00000472659 GOLGA2Q08379 1002 aa23.99■■□□□ 1.43
PKD1-209ENST00000472659 TRIM28Q13263 835 aaKnown RBP23.99■■□□□ 1.43
PKD1-209ENST00000472659 CCDC93Q567U6 631 aa23.99■■□□□ 1.43
PKD1-209ENST00000472659 OLFM4Q6UX06 510 aa23.99■■□□□ 1.43
PKD1-209ENST00000472659 SYNE4Q8N205 404 aa23.99■■□□□ 1.43
PKD1-209ENST00000472659 RPGRQ92834 1020 aaKnown RBP23.99■■□□□ 1.43
PKD1-209ENST00000472659 TRMT112Q9UI30 125 aaKnown RBP23.99■■□□□ 1.43
PKD1-209ENST00000472659 SH3TC1Q8TE82 1336 aa23.99■■□□□ 1.43
PKD1-209ENST00000472659 ZNF521Q96K83 1311 aa23.99■■□□□ 1.43
PKD1-209ENST00000472659 NLRP3Q96P20 1036 aa23.98■■□□□ 1.43
PKD1-209ENST00000472659 CRAMP1Q96RY5 1269 aa23.98■■□□□ 1.43
PKD1-209ENST00000472659 ATP5J2-PTCD1G3V325 749 aa23.97■■□□□ 1.43
PKD1-209ENST00000472659 RIC3Q7Z5B4 369 aa23.97■■□□□ 1.43
PKD1-209ENST00000472659 HCLS1P14317 486 aaPredicted RBP23.96■■□□□ 1.43
PKD1-209ENST00000472659 NMRK2Q9NPI5 230 aa23.96■■□□□ 1.43
PKD1-209ENST00000472659 KDM2BQ8NHM5 1336 aa23.95■■□□□ 1.42
PKD1-209ENST00000472659 RBM46Q8TBY0 533 aaKnown RBP23.95■■□□□ 1.42
PKD1-209ENST00000472659 ZNF428Q96B54 188 aa23.95■■□□□ 1.42
PKD1-209ENST00000472659 RBM17Q96I25 401 aaKnown RBP23.95■■□□□ 1.42
PKD1-209ENST00000472659 STK31Q9BXU1 1019 aa23.95■■□□□ 1.42
PKD1-209ENST00000472659 FKBP4Q02790 459 aaKnown RBP eCLIP23.94■■□□□ 1.42
PKD1-209ENST00000472659 ABCC4O15439 1325 aa23.93■■□□□ 1.42
PKD1-209ENST00000472659 CCER2I3L3R5 266 aa23.93■■□□□ 1.42
PKD1-209ENST00000472659 TCERG1O14776 1098 aaKnown RBP23.93■■□□□ 1.42
PKD1-209ENST00000472659 VAMP4O75379 141 aa23.93■■□□□ 1.42
PKD1-209ENST00000472659 DDX58O95786 925 aaKnown RBP23.93■■□□□ 1.42
PKD1-209ENST00000472659 EXOSC9Q06265 439 aaKnown RBP23.93■■□□□ 1.42
PKD1-209ENST00000472659 SLC51AQ86UW1 340 aa23.93■■□□□ 1.42
PKD1-209ENST00000472659 RTKN2Q8IZC4 609 aa23.93■■□□□ 1.42
PKD1-209ENST00000472659 FAM89AQ96GI7 184 aa23.93■■□□□ 1.42
PKD1-209ENST00000472659 APLP1P51693 650 aa23.92■■□□□ 1.42
PKD1-209ENST00000472659 CC2D2BQ6DHV5 1058 aa23.92■■□□□ 1.42
PKD1-209ENST00000472659 G2E3Q7L622 706 aa23.92■■□□□ 1.42
PKD1-209ENST00000472659 MYD88Q99836 296 aa23.92■■□□□ 1.42
PKD1-209ENST00000472659 METTL22Q9BUU2 404 aaPredicted RBP23.92■■□□□ 1.42
PKD1-209ENST00000472659 MYH16Q9H6N6 1097 aa23.92■■□□□ 1.42
PKD1-209ENST00000472659 GLTPD2A6NH11 291 aa23.91■■□□□ 1.42
PKD1-209ENST00000472659 PPEF1O14829 653 aaPredicted RBP23.91■■□□□ 1.42
PKD1-209ENST00000472659 SLC4A2P04920 1241 aa23.9■■□□□ 1.42
PKD1-209ENST00000472659 KSR2Q6VAB6 950 aa23.9■■□□□ 1.42
PKD1-209ENST00000472659 CCDC191Q8NCU4 936 aa23.9■■□□□ 1.42
PKD1-209ENST00000472659 PSMD1Q99460 953 aa23.9■■□□□ 1.42
PKD1-209ENST00000472659 MAP3K2Q9Y2U5 619 aa23.9■■□□□ 1.42
PKD1-209ENST00000472659 CACNA1FO60840 1977 aa23.9■■□□□ 1.42
PKD1-209ENST00000472659 PI4KAP2A4QPH2 592 aa23.89■■□□□ 1.41
PKD1-209ENST00000472659 FSTL1Q12841 308 aa23.89■■□□□ 1.41
PKD1-209ENST00000472659 PI4KAP1Q8N8J0 262 aa23.89■■□□□ 1.41
PKD1-209ENST00000472659 ZBTB38Q8NAP3 1195 aaPredicted RBP23.89■■□□□ 1.41
PKD1-209ENST00000472659 ZNF277Q9NRM2 450 aaPredicted RBP23.89■■□□□ 1.41
PKD1-209ENST00000472659 WDR90Q96KV7 1748 aa23.88■■□□□ 1.41
PKD1-209ENST00000472659 LRRC37AA6NMS7 1700 aa23.87■■□□□ 1.41
PKD1-209ENST00000472659 COL4A1P02462 1669 aa23.87■■□□□ 1.41
PKD1-209ENST00000472659 IGKV5-2P06315 115 aa23.87■■□□□ 1.41
PKD1-209ENST00000472659 FLIIQ13045 1269 aa23.87■■□□□ 1.41
PKD1-209ENST00000472659 SF3B3Q15393 1217 aaKnown RBP23.87■■□□□ 1.41
PKD1-209ENST00000472659 GRIPAP1Q4V328 841 aa23.87■■□□□ 1.41
PKD1-209ENST00000472659 RTL5Q5HYW3 569 aaPredicted RBP23.87■■□□□ 1.41
PKD1-209ENST00000472659 CWC25Q9NXE8 425 aaPredicted RBP23.87■■□□□ 1.41
PKD1-209ENST00000472659 ATP6V0A2Q9Y487 856 aa23.87■■□□□ 1.41
PKD1-209ENST00000472659 TAF1P21675 1872 aa23.87■■□□□ 1.41
PKD1-209ENST00000472659 COL4A5P29400 1685 aa23.86■■□□□ 1.41
PKD1-209ENST00000472659 IRS4O14654 1257 aaPredicted RBP23.86■■□□□ 1.41
PKD1-209ENST00000472659 DNAJC5GQ8N7S2 189 aa23.86■■□□□ 1.41
PKD1-209ENST00000472659 BBOX1O75936 387 aa23.85■■□□□ 1.41
PKD1-209ENST00000472659 PCCAP05165 728 aaPredicted RBP23.85■■□□□ 1.41
PKD1-209ENST00000472659 IARSP41252 1262 aaKnown RBP23.85■■□□□ 1.41
PKD1-209ENST00000472659 GRAPQ13588 217 aa23.85■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms