RNA–Protein interactions for RNA: ENST00000472045.1

IRF1-208, Transcript of interferon regulatory factor 1, humanhuman

TSL 2

Gene IRF1, Length 5,153 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-208ENST00000472045 NAA16Q6N069 864 aaPredicted RBP14.39□□□□□ -0.11
IRF1-208ENST00000472045 SOS1Q07889 1333 aaPredicted RBP14.38□□□□□ -0.11
IRF1-208ENST00000472045 CWF19L2Q2TBE0 894 aaKnown RBP14.38□□□□□ -0.11
IRF1-208ENST00000472045 SCLT1Q96NL6 688 aa14.38□□□□□ -0.11
IRF1-208ENST00000472045 RXRBP28702 533 aa14.38□□□□□ -0.11
IRF1-208ENST00000472045 FILIP1LQ4L180 1135 aa14.38□□□□□ -0.11
IRF1-208ENST00000472045 MFSD6Q6ZSS7 791 aa14.38□□□□□ -0.11
IRF1-208ENST00000472045 KAT14Q9H8E8 782 aa14.38□□□□□ -0.11
IRF1-208ENST00000472045 METP08581 1390 aa14.37□□□□□ -0.11
IRF1-208ENST00000472045 ERCC6L2Q5T890 1561 aa14.37□□□□□ -0.11
IRF1-208ENST00000472045 GOLGA8AA7E2F4 631 aa14.37□□□□□ -0.11
IRF1-208ENST00000472045 GOLGA8BA8MQT2 603 aa14.37□□□□□ -0.11
IRF1-208ENST00000472045 CCDC82Q8N4S0 544 aa14.37□□□□□ -0.11
IRF1-208ENST00000472045 ADGBQ8N7X0 1667 aa14.37□□□□□ -0.11
IRF1-208ENST00000472045 ZFYP08048 801 aaPredicted RBP14.37□□□□□ -0.11
IRF1-208ENST00000472045 MATR3P43243 847 aaKnown RBP eCLIP14.37□□□□□ -0.11
IRF1-208ENST00000472045 PICALMQ13492 652 aa14.37□□□□□ -0.11
IRF1-208ENST00000472045 KRT24Q2M2I5 525 aa14.37□□□□□ -0.11
IRF1-208ENST00000472045 CEP131Q9UPN4 1083 aa14.37□□□□□ -0.11
IRF1-208ENST00000472045 LETM1O95202 739 aaPredicted RBP14.37□□□□□ -0.11
IRF1-208ENST00000472045 SYCP1Q15431 976 aa14.37□□□□□ -0.11
IRF1-208ENST00000472045 KIF5BP33176 963 aa14.37□□□□□ -0.11
IRF1-208ENST00000472045 PDILTQ8N807 584 aa14.37□□□□□ -0.11
IRF1-208ENST00000472045 HELBQ8NG08 1087 aaPredicted RBP14.37□□□□□ -0.11
IRF1-208ENST00000472045 SH3TC1Q8TE82 1336 aa14.36□□□□□ -0.11
IRF1-208ENST00000472045 H0YIN7 160 aa14.36□□□□□ -0.11
IRF1-208ENST00000472045 GOLGA6L1Q8N7Z2 621 aa14.36□□□□□ -0.11
IRF1-208ENST00000472045 UPF3BQ9BZI7 483 aaKnown RBP14.36□□□□□ -0.11
IRF1-208ENST00000472045 BABAM1Q9NWV8 329 aa14.36□□□□□ -0.11
IRF1-208ENST00000472045 PRPF40AO75400 957 aaKnown RBP14.36□□□□□ -0.11
IRF1-208ENST00000472045 HOMER1Q86YM7 354 aa14.36□□□□□ -0.11
IRF1-208ENST00000472045 PLBD2Q8NHP8 589 aa14.36□□□□□ -0.11
IRF1-208ENST00000472045 CFAP45Q9UL16 551 aa14.36□□□□□ -0.11
IRF1-208ENST00000472045 GJA3Q9Y6H8 435 aa14.36□□□□□ -0.11
IRF1-208ENST00000472045 ERVK-7P63135 1459 aa14.35□□□□□ -0.11
IRF1-208ENST00000472045 DNAJC10Q8IXB1 793 aa14.35□□□□□ -0.11
IRF1-208ENST00000472045 HAND2P61296 217 aa14.35□□□□□ -0.11
IRF1-208ENST00000472045 TMEM67Q5HYA8 995 aa14.35□□□□□ -0.11
IRF1-208ENST00000472045 LGR6Q9HBX8 967 aa14.35□□□□□ -0.11
IRF1-208ENST00000472045 PDIA4P13667 645 aaKnown RBP14.35□□□□□ -0.11
IRF1-208ENST00000472045 PPP4R3AQ6IN85 833 aa14.35□□□□□ -0.11
IRF1-208ENST00000472045 ATP8B2P98198 1209 aa14.35□□□□□ -0.11
IRF1-208ENST00000472045 PPP4R3BQ5MIZ7 849 aa14.35□□□□□ -0.11
IRF1-208ENST00000472045 TSPYL6Q8N831 410 aa14.35□□□□□ -0.11
IRF1-208ENST00000472045 PDCL3Q9H2J4 239 aa14.35□□□□□ -0.11
IRF1-208ENST00000472045 SLC4A4Q9Y6R1 1079 aa14.35□□□□□ -0.11
IRF1-208ENST00000472045 ERVV-2B6SEH9 535 aa14.34□□□□□ -0.11
IRF1-208ENST00000472045 CCDC83Q8IWF9 413 aa14.34□□□□□ -0.11
IRF1-208ENST00000472045 DACH1Q9UI36 760 aa14.34□□□□□ -0.11
IRF1-208ENST00000472045 FAM89AQ96GI7 184 aa14.34□□□□□ -0.11
IRF1-208ENST00000472045 SPATA32Q96LK8 384 aa14.34□□□□□ -0.11
IRF1-208ENST00000472045 PLCG2P16885 1265 aa14.34□□□□□ -0.11
IRF1-208ENST00000472045 SSRP1Q08945 709 aaKnown RBP14.34□□□□□ -0.11
IRF1-208ENST00000472045 FLAD1Q8NFF5 587 aa14.34□□□□□ -0.11
IRF1-208ENST00000472045 MPHOSPH6Q99547 160 aaKnown RBP14.34□□□□□ -0.11
IRF1-208ENST00000472045 PHAXQ9H814 394 aaKnown RBP14.34□□□□□ -0.11
IRF1-208ENST00000472045 VAT1LQ9HCJ6 419 aa14.34□□□□□ -0.11
IRF1-208ENST00000472045 STX8Q9UNK0 236 aa14.34□□□□□ -0.11
IRF1-208ENST00000472045 UFL1O94874 794 aa14.34□□□□□ -0.11
IRF1-208ENST00000472045 A1BGP04217 495 aa14.34□□□□□ -0.11
IRF1-208ENST00000472045 BRPF1P55201 1214 aaPredicted RBP14.34□□□□□ -0.11
IRF1-208ENST00000472045 TSHZ3Q63HK5 1081 aa14.34□□□□□ -0.11
IRF1-208ENST00000472045 CCDC12Q8WUD4 166 aaPredicted RBP14.34□□□□□ -0.11
IRF1-208ENST00000472045 CCDC194A0A1B0GVG4 234 aa14.33□□□□□ -0.11
IRF1-208ENST00000472045 VAMP4O75379 141 aa14.33□□□□□ -0.11
IRF1-208ENST00000472045 TSPY3P0CV98 308 aa14.33□□□□□ -0.11
IRF1-208ENST00000472045 TSPY8P0CW00 308 aa14.33□□□□□ -0.11
IRF1-208ENST00000472045 NLRP5P59047 1200 aa14.33□□□□□ -0.11
IRF1-208ENST00000472045 PAF1Q8N7H5 531 aa14.33□□□□□ -0.11
IRF1-208ENST00000472045 PA2G4Q9UQ80 394 aaKnown RBP14.33□□□□□ -0.11
IRF1-208ENST00000472045 CEP57L1Q8IYX8 460 aa14.33□□□□□ -0.12
IRF1-208ENST00000472045 ZNF592Q92610 1267 aa14.33□□□□□ -0.12
IRF1-208ENST00000472045 HCLS1P14317 486 aaPredicted RBP14.33□□□□□ -0.12
IRF1-208ENST00000472045 SLC9C2Q5TAH2 1124 aa14.33□□□□□ -0.12
IRF1-208ENST00000472045 NCOA7Q8NI08 942 aa14.33□□□□□ -0.12
IRF1-208ENST00000472045 TANGO6Q9C0B7 1094 aa14.33□□□□□ -0.12
IRF1-208ENST00000472045 HOXB7P09629 217 aa14.32□□□□□ -0.12
IRF1-208ENST00000472045 C8orf76Q96K31 380 aa14.32□□□□□ -0.12
IRF1-208ENST00000472045 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.32□□□□□ -0.12
IRF1-208ENST00000472045 SMC2O95347 1197 aa14.32□□□□□ -0.12
IRF1-208ENST00000472045 LDHBP07195 334 aaKnown RBP14.32□□□□□ -0.12
IRF1-208ENST00000472045 CCDC178Q5BJE1 867 aa14.32□□□□□ -0.12
IRF1-208ENST00000472045 BACH2Q9BYV9 841 aa14.32□□□□□ -0.12
IRF1-208ENST00000472045 SH2B1Q9NRF2 756 aaPredicted RBP14.32□□□□□ -0.12
IRF1-208ENST00000472045 CAVIN1Q6NZI2 390 aaKnown RBP14.32□□□□□ -0.12
IRF1-208ENST00000472045 ANKRD44Q8N8A2 993 aa14.32□□□□□ -0.12
IRF1-208ENST00000472045 RAB34Q9BZG1 259 aa14.32□□□□□ -0.12
IRF1-208ENST00000472045 TNNI2P48788 182 aa14.32□□□□□ -0.12
IRF1-208ENST00000472045 PREX2Q70Z35 1606 aa14.32□□□□□ -0.12
IRF1-208ENST00000472045 KIAA0232Q92628 1395 aa14.32□□□□□ -0.12
IRF1-208ENST00000472045 GSE1Q14687 1217 aa14.31□□□□□ -0.12
IRF1-208ENST00000472045 PLXNC1O60486 1568 aa14.31□□□□□ -0.12
IRF1-208ENST00000472045 MAGEB6P1A0A0J9YX57 407 aa14.31□□□□□ -0.12
IRF1-208ENST00000472045 EIF6P56537 245 aaKnown RBP14.31□□□□□ -0.12
IRF1-208ENST00000472045 TMEM266Q2M3C6 531 aa14.31□□□□□ -0.12
IRF1-208ENST00000472045 CCDC191Q8NCU4 936 aa14.31□□□□□ -0.12
IRF1-208ENST00000472045 METTL22Q9BUU2 404 aaPredicted RBP14.31□□□□□ -0.12
IRF1-208ENST00000472045 GGA1Q9UJY5 639 aa14.31□□□□□ -0.12
IRF1-208ENST00000472045 PDE8AO60658 829 aa14.3□□□□□ -0.12
IRF1-208ENST00000472045 LARGE2Q8N3Y3 721 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms