RNA–Protein interactions for RNA: ENST00000471910.1

CDHR3-208, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 392 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-208ENST00000471910 INPP5BP32019 993 aa8.38□□□□□ -1.07
CDHR3-208ENST00000471910 NFX1Q12986 1120 aaKnown RBP8.38□□□□□ -1.07
CDHR3-208ENST00000471910 GZF1Q9H116 711 aaPredicted RBP8.38□□□□□ -1.07
CDHR3-208ENST00000471910 ZBTB39O15060 712 aa8.37□□□□□ -1.07
CDHR3-208ENST00000471910 WFS1O76024 890 aa8.37□□□□□ -1.07
CDHR3-208ENST00000471910 KCNQ4P56696 695 aa8.37□□□□□ -1.07
CDHR3-208ENST00000471910 ZNF775Q96BV0 537 aaPredicted RBP8.37□□□□□ -1.07
CDHR3-208ENST00000471910 C11orf16Q9NQ32 467 aa8.37□□□□□ -1.07
CDHR3-208ENST00000471910 FNDC3AQ9Y2H6 1198 aaKnown RBP8.37□□□□□ -1.07
CDHR3-208ENST00000471910 OPLAHO14841 1288 aa8.36□□□□□ -1.07
CDHR3-208ENST00000471910 EFSO43281 561 aa8.36□□□□□ -1.07
CDHR3-208ENST00000471910 MX2P20592 715 aa8.36□□□□□ -1.07
CDHR3-208ENST00000471910 RGL4Q8IZJ4 473 aa8.36□□□□□ -1.07
CDHR3-208ENST00000471910 CMTR1Q8N1G2 835 aaKnown RBP8.36□□□□□ -1.07
CDHR3-208ENST00000471910 GPR152Q8TDT2 470 aa8.36□□□□□ -1.07
CDHR3-208ENST00000471910 BRPF3Q9ULD4 1205 aa8.36□□□□□ -1.07
CDHR3-208ENST00000471910 RTCBQ9Y3I0 505 aaKnown RBP8.36□□□□□ -1.07
CDHR3-208ENST00000471910 NDUFB5O43674 189 aa8.35□□□□□ -1.07
CDHR3-208ENST00000471910 BMP4P12644 408 aa8.35□□□□□ -1.07
CDHR3-208ENST00000471910 MZF1P28698 734 aaPredicted RBP8.35□□□□□ -1.07
CDHR3-208ENST00000471910 USP5P45974 858 aa8.35□□□□□ -1.07
CDHR3-208ENST00000471910 DNM1Q05193 864 aaKnown RBP8.35□□□□□ -1.07
CDHR3-208ENST00000471910 SFSWAPQ12872 951 aaKnown RBP8.35□□□□□ -1.07
CDHR3-208ENST00000471910 NEUROD1Q13562 356 aa8.35□□□□□ -1.07
CDHR3-208ENST00000471910 FAM26DQ5JW98 314 aa8.35□□□□□ -1.07
CDHR3-208ENST00000471910 FAM182BQ5T319 152 aa8.35□□□□□ -1.07
CDHR3-208ENST00000471910 GPR161Q8N6U8 529 aaKnown RBP8.35□□□□□ -1.07
CDHR3-208ENST00000471910 COL25A1Q9BXS0 654 aaPredicted RBP8.35□□□□□ -1.07
CDHR3-208ENST00000471910 PRR12Q9ULL5 1215 aa8.35□□□□□ -1.07
CDHR3-208ENST00000471910 CD33P20138 364 aa8.34□□□□□ -1.07
CDHR3-208ENST00000471910 SND1Q7KZF4 910 aaKnown RBP eCLIP8.34□□□□□ -1.07
CDHR3-208ENST00000471910 ATCAYQ86WG3 371 aa8.34□□□□□ -1.07
CDHR3-208ENST00000471910 EDEM1Q92611 657 aa8.34□□□□□ -1.07
CDHR3-208ENST00000471910 PNMA5Q96PV4 448 aa8.34□□□□□ -1.07
CDHR3-208ENST00000471910 EFCC1Q9HA90 598 aa8.34□□□□□ -1.07
CDHR3-208ENST00000471910 MBIPQ9NS73 344 aa8.34□□□□□ -1.07
CDHR3-208ENST00000471910 ERBB4Q15303 1308 aa8.33□□□□□ -1.08
CDHR3-208ENST00000471910 MAP2K3P46734 347 aa8.33□□□□□ -1.08
CDHR3-208ENST00000471910 TRIM26Q12899 539 aaPredicted RBP8.33□□□□□ -1.08
CDHR3-208ENST00000471910 TREML4Q6UXN2 200 aa8.33□□□□□ -1.08
CDHR3-208ENST00000471910 STRN4Q9NRL3 753 aa8.33□□□□□ -1.08
CDHR3-208ENST00000471910 ARHGAP4P98171 946 aa8.32□□□□□ -1.08
CDHR3-208ENST00000471910 CTBSQ01459 385 aa8.32□□□□□ -1.08
CDHR3-208ENST00000471910 EHHADHQ08426 723 aa8.32□□□□□ -1.08
CDHR3-208ENST00000471910 CCINQ13939 588 aa8.32□□□□□ -1.08
CDHR3-208ENST00000471910 NUDT16Q96DE0 195 aaKnown RBP8.32□□□□□ -1.08
CDHR3-208ENST00000471910 CITED4Q96RK1 184 aa8.32□□□□□ -1.08
CDHR3-208ENST00000471910 POLIQ9UNA4 740 aa8.32□□□□□ -1.08
CDHR3-208ENST00000471910 USP20Q9Y2K6 914 aa8.32□□□□□ -1.08
CDHR3-208ENST00000471910 UBAP1LF5GYI3 381 aa8.31□□□□□ -1.08
CDHR3-208ENST00000471910 FZD6O60353 706 aa8.31□□□□□ -1.08
CDHR3-208ENST00000471910 XYLBO75191 536 aa8.31□□□□□ -1.08
CDHR3-208ENST00000471910 PDGFAP04085 211 aa8.31□□□□□ -1.08
CDHR3-208ENST00000471910 SPEM2Q0P670 501 aa8.31□□□□□ -1.08
CDHR3-208ENST00000471910 GAS6Q14393 721 aa8.31□□□□□ -1.08
CDHR3-208ENST00000471910 ECM1Q16610 540 aa8.31□□□□□ -1.08
CDHR3-208ENST00000471910 C8orf34Q49A92 452 aa8.31□□□□□ -1.08
CDHR3-208ENST00000471910 TMC1Q8TDI8 760 aa8.31□□□□□ -1.08
CDHR3-208ENST00000471910 CCDC87Q9NVE4 849 aa8.31□□□□□ -1.08
CDHR3-208ENST00000471910 DCTN4Q9UJW0 460 aa8.31□□□□□ -1.08
CDHR3-208ENST00000471910 EGFRP00533 1210 aa8.3□□□□□ -1.08
CDHR3-208ENST00000471910 MAPK1P28482 360 aa8.3□□□□□ -1.08
CDHR3-208ENST00000471910 PDE3BQ13370 1112 aa8.3□□□□□ -1.08
CDHR3-208ENST00000471910 CNTNAP3BQ96NU0 1288 aa8.3□□□□□ -1.08
CDHR3-208ENST00000471910 CNTNAP3Q9BZ76 1288 aa8.3□□□□□ -1.08
CDHR3-208ENST00000471910 GSX2Q9BZM3 304 aa8.3□□□□□ -1.08
CDHR3-208ENST00000471910 GMPRP36959 345 aa8.29□□□□□ -1.08
CDHR3-208ENST00000471910 SRSF11Q05519 484 aaKnown RBP8.29□□□□□ -1.08
CDHR3-208ENST00000471910 TMCO4Q5TGY1 634 aa8.29□□□□□ -1.08
CDHR3-208ENST00000471910 AVENQ9NQS1 362 aaPredicted RBP8.29□□□□□ -1.08
CDHR3-208ENST00000471910 KCNMB2Q9Y691 235 aa8.29□□□□□ -1.08
CDHR3-208ENST00000471910 IGF1RP08069 1367 aa8.29□□□□□ -1.08
CDHR3-208ENST00000471910 MARSP56192 900 aaKnown RBP8.28□□□□□ -1.08
CDHR3-208ENST00000471910 CCDC27Q2M243 656 aa8.28□□□□□ -1.08
CDHR3-208ENST00000471910 RNFT1Q5M7Z0 435 aa8.28□□□□□ -1.08
CDHR3-208ENST00000471910 NLRP13Q86W25 1043 aa8.28□□□□□ -1.08
CDHR3-208ENST00000471910 ZSCAN29Q8IWY8 852 aaPredicted RBP8.28□□□□□ -1.08
CDHR3-208ENST00000471910 BHMTQ93088 406 aa8.28□□□□□ -1.08
CDHR3-208ENST00000471910 SLC30A3Q99726 388 aa8.28□□□□□ -1.08
CDHR3-208ENST00000471910 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.28□□□□□ -1.08
CDHR3-208ENST00000471910 C2CD2LO14523 706 aa8.27□□□□□ -1.09
CDHR3-208ENST00000471910 SASH3O75995 380 aa8.27□□□□□ -1.09
CDHR3-208ENST00000471910 NEFLP07196 543 aa8.27□□□□□ -1.09
CDHR3-208ENST00000471910 ARAFP10398 606 aa8.27□□□□□ -1.09
CDHR3-208ENST00000471910 GRNP28799 593 aaKnown RBP8.27□□□□□ -1.09
CDHR3-208ENST00000471910 PDE12Q6L8Q7 609 aaKnown RBP8.27□□□□□ -1.09
CDHR3-208ENST00000471910 KRT25Q7Z3Z0 450 aa8.27□□□□□ -1.09
CDHR3-208ENST00000471910 ZNF438Q7Z4V0 828 aa8.27□□□□□ -1.09
CDHR3-208ENST00000471910 RBCK1Q9BYM8 510 aa8.27□□□□□ -1.09
CDHR3-208ENST00000471910 RARAP10276 462 aa8.26□□□□□ -1.09
CDHR3-208ENST00000471910 ZNF468Q5VIY5 522 aaPredicted RBP8.26□□□□□ -1.09
CDHR3-208ENST00000471910 TTC39BQ5VTQ0 682 aaPredicted RBP8.26□□□□□ -1.09
CDHR3-208ENST00000471910 XKR5Q6UX68 686 aa8.26□□□□□ -1.09
CDHR3-208ENST00000471910 SYT9Q86SS6 491 aa8.26□□□□□ -1.09
CDHR3-208ENST00000471910 GJD3Q8N144 294 aa8.26□□□□□ -1.09
CDHR3-208ENST00000471910 DMRTB1Q96MA1 342 aa8.26□□□□□ -1.09
CDHR3-208ENST00000471910 GGNBP2Q9H3C7 697 aa8.26□□□□□ -1.09
CDHR3-208ENST00000471910 GDF2Q9UK05 429 aaPredicted RBP8.26□□□□□ -1.09
CDHR3-208ENST00000471910 HCN2Q9UL51 889 aa8.26□□□□□ -1.09
CDHR3-208ENST00000471910 ADAMTS2O95450 1211 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms