RNA–Protein interactions for RNA: ENST00000471842.1

LTA-215, Transcript of lymphotoxin alpha, humanhuman

TSL 2

Gene LTA, Length 1,497 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTA-215ENST00000471842 DUSP27Q5VZP5 1158 aa17.08■□□□□ 0.32
LTA-215ENST00000471842 ZNF277Q9NRM2 450 aaPredicted RBP17.08■□□□□ 0.32
LTA-215ENST00000471842 LTBP3Q9NS15 1303 aa17.08■□□□□ 0.32
LTA-215ENST00000471842 HSP90AB3PQ58FF7 597 aa17.07■□□□□ 0.32
LTA-215ENST00000471842 RBM46Q8TBY0 533 aaKnown RBP17.07■□□□□ 0.32
LTA-215ENST00000471842 RBM17Q96I25 401 aaKnown RBP17.07■□□□□ 0.32
LTA-215ENST00000471842 MRS2Q9HD23 443 aa17.07■□□□□ 0.32
LTA-215ENST00000471842 GNAI1P63096 354 aa17.06■□□□□ 0.32
LTA-215ENST00000471842 FKBP4Q02790 459 aaKnown RBP eCLIP17.06■□□□□ 0.32
LTA-215ENST00000471842 C3orf67Q6ZVT6 689 aa17.06■□□□□ 0.32
LTA-215ENST00000471842 IFT57Q9NWB7 429 aa17.06■□□□□ 0.32
LTA-215ENST00000471842 VEGFAP15692 232 aaPredicted RBP17.05■□□□□ 0.32
LTA-215ENST00000471842 CRY2Q49AN0 593 aa17.05■□□□□ 0.32
LTA-215ENST00000471842 RTKN2Q8IZC4 609 aa17.05■□□□□ 0.32
LTA-215ENST00000471842 C7orf43Q8WVR3 580 aa17.05■□□□□ 0.32
LTA-215ENST00000471842 DBF4Q9UBU7 674 aaPredicted RBP17.05■□□□□ 0.32
LTA-215ENST00000471842 TRMT112Q9UI30 125 aaKnown RBP17.05■□□□□ 0.32
LTA-215ENST00000471842 PPEF1O14829 653 aaPredicted RBP17.05■□□□□ 0.32
LTA-215ENST00000471842 HOXB7P09629 217 aa17.05■□□□□ 0.32
LTA-215ENST00000471842 NLRP3Q96P20 1036 aa17.05■□□□□ 0.32
LTA-215ENST00000471842 ANKRD36CQ5JPF3 1778 aa17.04■□□□□ 0.32
LTA-215ENST00000471842 RIC1Q4ADV7 1423 aa17.04■□□□□ 0.32
LTA-215ENST00000471842 DDNO94850 711 aaPredicted RBP17.04■□□□□ 0.32
LTA-215ENST00000471842 HCLS1P14317 486 aaPredicted RBP17.04■□□□□ 0.32
LTA-215ENST00000471842 APLP1P51693 650 aa17.04■□□□□ 0.32
LTA-215ENST00000471842 SLC51AQ86UW1 340 aa17.04■□□□□ 0.32
LTA-215ENST00000471842 NLRP10Q86W26 655 aa17.04■□□□□ 0.32
LTA-215ENST00000471842 SYNE4Q8N205 404 aa17.04■□□□□ 0.32
LTA-215ENST00000471842 SMC1BQ8NDV3 1235 aa17.04■□□□□ 0.32
LTA-215ENST00000471842 TMX4Q9H1E5 349 aaPredicted RBP17.04■□□□□ 0.32
LTA-215ENST00000471842 ATP5J2-PTCD1G3V325 749 aa17.03■□□□□ 0.32
LTA-215ENST00000471842 TCIRG1Q13488 830 aa17.03■□□□□ 0.32
LTA-215ENST00000471842 PLBD2Q8NHP8 589 aa17.03■□□□□ 0.32
LTA-215ENST00000471842 HYPKQ9NX55 129 aa17.03■□□□□ 0.32
LTA-215ENST00000471842 SALL2Q9Y467 1007 aaPredicted RBP17.03■□□□□ 0.32
LTA-215ENST00000471842 ZNF853P0CG23 659 aa17.02■□□□□ 0.32
LTA-215ENST00000471842 IARSP41252 1262 aaKnown RBP17.02■□□□□ 0.32
LTA-215ENST00000471842 FSTL1Q12841 308 aa17.02■□□□□ 0.32
LTA-215ENST00000471842 RTL5Q5HYW3 569 aaPredicted RBP17.02■□□□□ 0.32
LTA-215ENST00000471842 ANKRD13DQ6ZTN6 518 aa17.02■□□□□ 0.32
LTA-215ENST00000471842 TSR2Q969E8 191 aaKnown RBP17.02■□□□□ 0.32
LTA-215ENST00000471842 HTRA3P83110 453 aa17.01■□□□□ 0.31
LTA-215ENST00000471842 GOLGA2Q08379 1002 aa17.01■□□□□ 0.31
LTA-215ENST00000471842 RIC3Q7Z5B4 369 aa17.01■□□□□ 0.31
LTA-215ENST00000471842 SH3TC1Q8TE82 1336 aa17.01■□□□□ 0.31
LTA-215ENST00000471842 DICER1Q9UPY3 1922 aaKnown RBP17■□□□□ 0.31
LTA-215ENST00000471842 HOXA10P31260 410 aaPredicted RBP17■□□□□ 0.31
LTA-215ENST00000471842 C8orf58Q8NAV2 365 aa17■□□□□ 0.31
LTA-215ENST00000471842 CRAMP1Q96RY5 1269 aa17■□□□□ 0.31
LTA-215ENST00000471842 ZNF541Q9H0D2 1346 aa17■□□□□ 0.31
LTA-215ENST00000471842 WDR90Q96KV7 1748 aa17■□□□□ 0.31
LTA-215ENST00000471842 JDP2Q8WYK2 163 aa16.99■□□□□ 0.31
LTA-215ENST00000471842 PHAXQ9H814 394 aaKnown RBP16.99■□□□□ 0.31
LTA-215ENST00000471842 ABCC4O15439 1325 aa16.99■□□□□ 0.31
LTA-215ENST00000471842 RNF123Q5XPI4 1314 aa16.99■□□□□ 0.31
LTA-215ENST00000471842 DDX46Q7L014 1031 aaKnown RBP16.99■□□□□ 0.31
LTA-215ENST00000471842 CEP350Q5VT06 3117 aa16.98■□□□□ 0.31
LTA-215ENST00000471842 POTECB2RU33 542 aa16.98■□□□□ 0.31
LTA-215ENST00000471842 SLC10A5Q5PT55 438 aa16.98■□□□□ 0.31
LTA-215ENST00000471842 CC2D2BQ6DHV5 1058 aa16.98■□□□□ 0.31
LTA-215ENST00000471842 LARGE2Q8N3Y3 721 aa16.98■□□□□ 0.31
LTA-215ENST00000471842 FAM89AQ96GI7 184 aa16.98■□□□□ 0.31
LTA-215ENST00000471842 PSMD1Q99460 953 aa16.98■□□□□ 0.31
LTA-215ENST00000471842 GJA3Q9Y6H8 435 aa16.98■□□□□ 0.31
LTA-215ENST00000471842 CCDC30Q5VVM6 783 aa16.97■□□□□ 0.31
LTA-215ENST00000471842 WWC1Q8IX03 1113 aa16.97■□□□□ 0.31
LTA-215ENST00000471842 TSPYL6Q8N831 410 aa16.97■□□□□ 0.31
LTA-215ENST00000471842 MYD88Q99836 296 aa16.97■□□□□ 0.31
LTA-215ENST00000471842 LAMB2P55268 1798 aa16.96■□□□□ 0.31
LTA-215ENST00000471842 IQCA1LA6NCM1 817 aa16.96■□□□□ 0.31
LTA-215ENST00000471842 EAPPQ56P03 285 aaPredicted RBP16.96■□□□□ 0.31
LTA-215ENST00000471842 FAM9BQ8IZU0 186 aa16.96■□□□□ 0.31
LTA-215ENST00000471842 PPIP5K2O43314 1243 aa16.95■□□□□ 0.3
LTA-215ENST00000471842 POTEIP0CG38 1075 aa16.95■□□□□ 0.3
LTA-215ENST00000471842 POTEJP0CG39 1038 aa16.95■□□□□ 0.3
LTA-215ENST00000471842 EIF6P56537 245 aaKnown RBP16.95■□□□□ 0.3
LTA-215ENST00000471842 ISCA1Q9BUE6 129 aa16.95■□□□□ 0.3
LTA-215ENST00000471842 STK31Q9BXU1 1019 aa16.95■□□□□ 0.3
LTA-215ENST00000471842 ATP6V0A2Q9Y487 856 aa16.95■□□□□ 0.3
LTA-215ENST00000471842 SNED1Q8TER0 1413 aa16.95■□□□□ 0.3
LTA-215ENST00000471842 DDX58O95786 925 aaKnown RBP16.94■□□□□ 0.3
LTA-215ENST00000471842 GRAPQ13588 217 aa16.94■□□□□ 0.3
LTA-215ENST00000471842 AOC3Q16853 763 aa16.94■□□□□ 0.3
LTA-215ENST00000471842 DPP8Q6V1X1 898 aaPredicted RBP16.94■□□□□ 0.3
LTA-215ENST00000471842 NIM1KQ8IY84 436 aa16.94■□□□□ 0.3
LTA-215ENST00000471842 GRAPLQ8TC17 118 aaPredicted RBP16.94■□□□□ 0.3
LTA-215ENST00000471842 CLEC11AQ9Y240 323 aa16.94■□□□□ 0.3
LTA-215ENST00000471842 COL4A5P29400 1685 aa16.94■□□□□ 0.3
LTA-215ENST00000471842 CCDC27Q2M243 656 aa16.93■□□□□ 0.3
LTA-215ENST00000471842 GRIPAP1Q4V328 841 aa16.93■□□□□ 0.3
LTA-215ENST00000471842 JARID2Q92833 1246 aaPredicted RBP16.93■□□□□ 0.3
LTA-215ENST00000471842 HACL1Q9UJ83 578 aa16.93■□□□□ 0.3
LTA-215ENST00000471842 DDX60Q8IY21 1712 aaKnown RBP16.93■□□□□ 0.3
LTA-215ENST00000471842 IRS4O14654 1257 aaPredicted RBP16.93■□□□□ 0.3
LTA-215ENST00000471842 BBOX1O75936 387 aa16.93■□□□□ 0.3
LTA-215ENST00000471842 TWISTNBQ3B726 338 aaPredicted RBP16.93■□□□□ 0.3
LTA-215ENST00000471842 CHADLQ6NUI6 762 aa16.93■□□□□ 0.3
LTA-215ENST00000471842 CHMP4AQ9BY43 222 aa16.93■□□□□ 0.3
LTA-215ENST00000471842 FZD9O00144 591 aa16.92■□□□□ 0.3
LTA-215ENST00000471842 GPC2Q8N158 579 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms