RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 GRIPAP1Q4V328 841 aa11.95□□□□□ -0.5
SF3A1-206ENST00000471037 EAPPQ56P03 285 aaPredicted RBP11.95□□□□□ -0.5
SF3A1-206ENST00000471037 PLEKHF1Q96S99 279 aa11.95□□□□□ -0.5
SF3A1-206ENST00000471037 DLG5Q8TDM6 1919 aa11.95□□□□□ -0.5
SF3A1-206ENST00000471037 NUP98P52948 1817 aa11.95□□□□□ -0.5
SF3A1-206ENST00000471037 COL4A5P29400 1685 aa11.94□□□□□ -0.5
SF3A1-206ENST00000471037 ERBB4Q15303 1308 aa11.94□□□□□ -0.5
SF3A1-206ENST00000471037 UBN2Q6ZU65 1347 aa11.94□□□□□ -0.5
SF3A1-206ENST00000471037 KIF6Q6ZMV9 814 aa11.94□□□□□ -0.5
SF3A1-206ENST00000471037 TTLL7Q6ZT98 887 aa11.94□□□□□ -0.5
SF3A1-206ENST00000471037 NUTM1Q86Y26 1132 aa11.94□□□□□ -0.5
SF3A1-206ENST00000471037 JDP2Q8WYK2 163 aa11.94□□□□□ -0.5
SF3A1-206ENST00000471037 RASSF10A6NK89 507 aa11.93□□□□□ -0.5
SF3A1-206ENST00000471037 FOXN1O15353 648 aa11.93□□□□□ -0.5
SF3A1-206ENST00000471037 VEGFBP49765 207 aa11.93□□□□□ -0.5
SF3A1-206ENST00000471037 NFE2L2Q16236 605 aa11.93□□□□□ -0.5
SF3A1-206ENST00000471037 ZNF34Q8IZ26 560 aa11.93□□□□□ -0.5
SF3A1-206ENST00000471037 RPGRQ92834 1020 aaKnown RBP11.93□□□□□ -0.5
SF3A1-206ENST00000471037 PRDM10Q9NQV6 1147 aa11.93□□□□□ -0.5
SF3A1-206ENST00000471037 LTBP1Q14766 1721 aa11.92□□□□□ -0.5
SF3A1-206ENST00000471037 NTSR2O95665 410 aa11.92□□□□□ -0.5
SF3A1-206ENST00000471037 EIF6P56537 245 aaKnown RBP11.92□□□□□ -0.5
SF3A1-206ENST00000471037 GIGYF2Q6Y7W6 1299 aaKnown RBP11.92□□□□□ -0.5
SF3A1-206ENST00000471037 CNTROBQ8N137 903 aa11.92□□□□□ -0.5
SF3A1-206ENST00000471037 NGEFQ8N5V2 710 aa11.92□□□□□ -0.5
SF3A1-206ENST00000471037 CRAMP1Q96RY5 1269 aa11.92□□□□□ -0.5
SF3A1-206ENST00000471037 CLEC11AQ9Y240 323 aa11.92□□□□□ -0.5
SF3A1-206ENST00000471037 RRP7AQ9Y3A4 280 aaKnown RBP11.92□□□□□ -0.5
SF3A1-206ENST00000471037 MYL6BP14649 208 aa11.91□□□□□ -0.5
SF3A1-206ENST00000471037 GPTP24298 496 aa11.91□□□□□ -0.5
SF3A1-206ENST00000471037 CTCFP49711 727 aaPredicted RBP11.91□□□□□ -0.5
SF3A1-206ENST00000471037 SUSD4Q5VX71 490 aa11.91□□□□□ -0.5
SF3A1-206ENST00000471037 MAP1SQ66K74 1059 aaPredicted RBP11.91□□□□□ -0.5
SF3A1-206ENST00000471037 LRP10Q7Z4F1 713 aa11.91□□□□□ -0.5
SF3A1-206ENST00000471037 AIDAQ96BJ3 306 aa11.91□□□□□ -0.5
SF3A1-206ENST00000471037 RBM17Q96I25 401 aaKnown RBP11.91□□□□□ -0.5
SF3A1-206ENST00000471037 ZBTB3Q9H5J0 574 aa11.91□□□□□ -0.5
SF3A1-206ENST00000471037 WBP1LQ9NX94 342 aa11.91□□□□□ -0.5
SF3A1-206ENST00000471037 THSD7BQ9C0I4 1608 aa11.9□□□□□ -0.5
SF3A1-206ENST00000471037 PPEF1O14829 653 aaPredicted RBP11.9□□□□□ -0.5
SF3A1-206ENST00000471037 SCNN1DP51172 638 aa11.9□□□□□ -0.5
SF3A1-206ENST00000471037 PARP10Q53GL7 1025 aa11.9□□□□□ -0.5
SF3A1-206ENST00000471037 LARGE2Q8N3Y3 721 aa11.9□□□□□ -0.5
SF3A1-206ENST00000471037 THUMPD2Q9BTF0 503 aaKnown RBP11.9□□□□□ -0.5
SF3A1-206ENST00000471037 PNNQ9H307 717 aaKnown RBP11.9□□□□□ -0.5
SF3A1-206ENST00000471037 MAPK8IP3Q9UPT6 1336 aa11.89□□□□□ -0.51
SF3A1-206ENST00000471037 LMOD1P29536 600 aaPredicted RBP11.89□□□□□ -0.51
SF3A1-206ENST00000471037 DEFB115Q30KQ5 88 aa11.89□□□□□ -0.51
SF3A1-206ENST00000471037 C3orf67Q6ZVT6 689 aa11.89□□□□□ -0.51
SF3A1-206ENST00000471037 PPP1R42Q7Z4L9 355 aa11.89□□□□□ -0.51
SF3A1-206ENST00000471037 VPS33BQ9H267 617 aa11.89□□□□□ -0.51
SF3A1-206ENST00000471037 DDX21Q9NR30 783 aaKnown RBP eCLIP11.89□□□□□ -0.51
SF3A1-206ENST00000471037 GJA3Q9Y6H8 435 aa11.89□□□□□ -0.51
SF3A1-206ENST00000471037 PDIA6Q15084 440 aa11.88□□□□□ -0.51
SF3A1-206ENST00000471037 SLC10A5Q5PT55 438 aa11.88□□□□□ -0.51
SF3A1-206ENST00000471037 USP50Q70EL3 339 aaPredicted RBP11.88□□□□□ -0.51
SF3A1-206ENST00000471037 SLC51AQ86UW1 340 aa11.88□□□□□ -0.51
SF3A1-206ENST00000471037 NIM1KQ8IY84 436 aa11.88□□□□□ -0.51
SF3A1-206ENST00000471037 NLRP3Q96P20 1036 aa11.88□□□□□ -0.51
SF3A1-206ENST00000471037 MRS2Q9HD23 443 aa11.88□□□□□ -0.51
SF3A1-206ENST00000471037 BABAM1Q9NWV8 329 aa11.88□□□□□ -0.51
SF3A1-206ENST00000471037 ATP6V0A2Q9Y487 856 aa11.88□□□□□ -0.51
SF3A1-206ENST00000471037 WDR33Q9C0J8 1336 aaKnown RBP11.87□□□□□ -0.51
SF3A1-206ENST00000471037 EPS15P42566 896 aa11.87□□□□□ -0.51
SF3A1-206ENST00000471037 MAP2K1Q02750 393 aaPredicted RBP11.87□□□□□ -0.51
SF3A1-206ENST00000471037 RTFDC1Q9BY42 306 aaPredicted RBP11.87□□□□□ -0.51
SF3A1-206ENST00000471037 TSPYL4Q9UJ04 414 aa11.87□□□□□ -0.51
SF3A1-206ENST00000471037 ABCC4O15439 1325 aa11.86□□□□□ -0.51
SF3A1-206ENST00000471037 PPIP5K2O43314 1243 aa11.86□□□□□ -0.51
SF3A1-206ENST00000471037 HSPA8P11142 646 aaKnown RBP11.86□□□□□ -0.51
SF3A1-206ENST00000471037 LBX1P52954 281 aa11.86□□□□□ -0.51
SF3A1-206ENST00000471037 UTP14AQ9BVJ6 771 aaKnown RBP11.86□□□□□ -0.51
SF3A1-206ENST00000471037 ABT1Q9ULW3 272 aaKnown RBP11.86□□□□□ -0.51
SF3A1-206ENST00000471037 ANKRD36CQ5JPF3 1778 aa11.86□□□□□ -0.51
SF3A1-206ENST00000471037 CDHR2Q9BYE9 1310 aa11.86□□□□□ -0.51
SF3A1-206ENST00000471037 TCERG1O14776 1098 aaKnown RBP11.85□□□□□ -0.51
SF3A1-206ENST00000471037 AOC3Q16853 763 aa11.85□□□□□ -0.51
SF3A1-206ENST00000471037 PROSER3Q2NL68 480 aa11.85□□□□□ -0.51
SF3A1-206ENST00000471037 HSP90AB3PQ58FF7 597 aa11.85□□□□□ -0.51
SF3A1-206ENST00000471037 SUPT20HQ8NEM7 779 aa11.85□□□□□ -0.51
SF3A1-206ENST00000471037 TMX4Q9H1E5 349 aaPredicted RBP11.85□□□□□ -0.51
SF3A1-206ENST00000471037 ADARB2Q9NS39 739 aaKnown RBP11.85□□□□□ -0.51
SF3A1-206ENST00000471037 GPRC5DQ9NZD1 345 aa11.85□□□□□ -0.51
SF3A1-206ENST00000471037 BBOX1O75936 387 aa11.84□□□□□ -0.51
SF3A1-206ENST00000471037 EIF2S2P20042 333 aaKnown RBP11.84□□□□□ -0.51
SF3A1-206ENST00000471037 ECE1P42892 770 aa11.84□□□□□ -0.51
SF3A1-206ENST00000471037 RIPK4P57078 832 aa11.84□□□□□ -0.51
SF3A1-206ENST00000471037 FMR1Q06787 632 aaKnown RBP eCLIP11.84□□□□□ -0.512e-9■□□□□ 10.5
SF3A1-206ENST00000471037 CXCL9Q07325 125 aa11.84□□□□□ -0.51
SF3A1-206ENST00000471037 CCDC184Q52MB2 194 aa11.84□□□□□ -0.51
SF3A1-206ENST00000471037 NLRP10Q86W26 655 aa11.84□□□□□ -0.51
SF3A1-206ENST00000471037 SP8Q8IXZ3 490 aa11.84□□□□□ -0.51
SF3A1-206ENST00000471037 PIAS4Q8N2W9 510 aaPredicted RBP11.84□□□□□ -0.51
SF3A1-206ENST00000471037 ZNRF3Q9ULT6 936 aa11.84□□□□□ -0.51
SF3A1-206ENST00000471037 TLL2Q9Y6L7 1015 aa11.84□□□□□ -0.51
SF3A1-206ENST00000471037 LAMB2P55268 1798 aa11.84□□□□□ -0.51
SF3A1-206ENST00000471037 TRPM7Q96QT4 1865 aa11.83□□□□□ -0.52
SF3A1-206ENST00000471037 ANXA1P04083 346 aa11.83□□□□□ -0.52
SF3A1-206ENST00000471037 LMOD3Q0VAK6 560 aa11.83□□□□□ -0.52
SF3A1-206ENST00000471037 KIAA2012Q0VF49 1180 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms