RNA–Protein interactions for RNA: ENST00000470737.1

SEMA3F-208, Transcript of semaphorin 3F, humanhuman

TSL 5

Gene SEMA3F, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-208ENST00000470737 TTLL7Q6ZT98 887 aa18.3■□□□□ 0.52
SEMA3F-208ENST00000470737 GPC2Q8N158 579 aa18.3■□□□□ 0.52
SEMA3F-208ENST00000470737 ZBTB3Q9H5J0 574 aa18.3■□□□□ 0.52
SEMA3F-208ENST00000470737 IBTKQ9P2D0 1353 aaPredicted RBP18.3■□□□□ 0.52
SEMA3F-208ENST00000470737 GPTP24298 496 aa18.29■□□□□ 0.52
SEMA3F-208ENST00000470737 LMOD1P29536 600 aaPredicted RBP18.29■□□□□ 0.52
SEMA3F-208ENST00000470737 RBM17Q96I25 401 aaKnown RBP18.29■□□□□ 0.52
SEMA3F-208ENST00000470737 TMX4Q9H1E5 349 aaPredicted RBP18.29■□□□□ 0.52
SEMA3F-208ENST00000470737 ITGBL1O95965 494 aaPredicted RBP18.28■□□□□ 0.52
SEMA3F-208ENST00000470737 GJA3Q9Y6H8 435 aa18.28■□□□□ 0.52
SEMA3F-208ENST00000470737 RIC1Q4ADV7 1423 aa18.28■□□□□ 0.52
SEMA3F-208ENST00000470737 ADAMTSL1Q8N6G6 1762 aa18.27■□□□□ 0.52
SEMA3F-208ENST00000470737 ERBB4Q15303 1308 aa18.27■□□□□ 0.52
SEMA3F-208ENST00000470737 PPP1R42Q7Z4L9 355 aa18.27■□□□□ 0.52
SEMA3F-208ENST00000470737 CNTROBQ8N137 903 aa18.27■□□□□ 0.52
SEMA3F-208ENST00000470737 LARGE2Q8N3Y3 721 aa18.27■□□□□ 0.52
SEMA3F-208ENST00000470737 PLEKHF1Q96S99 279 aa18.27■□□□□ 0.52
SEMA3F-208ENST00000470737 THUMPD2Q9BTF0 503 aaKnown RBP18.27■□□□□ 0.52
SEMA3F-208ENST00000470737 UBN2Q6ZU65 1347 aa18.26■□□□□ 0.51
SEMA3F-208ENST00000470737 PPEF1O14829 653 aaPredicted RBP18.26■□□□□ 0.51
SEMA3F-208ENST00000470737 HOXA10P31260 410 aaPredicted RBP18.26■□□□□ 0.51
SEMA3F-208ENST00000470737 VEGFBP49765 207 aa18.26■□□□□ 0.51
SEMA3F-208ENST00000470737 PARP10Q53GL7 1025 aa18.26■□□□□ 0.51
SEMA3F-208ENST00000470737 SUSD4Q5VX71 490 aa18.26■□□□□ 0.51
SEMA3F-208ENST00000470737 MAP1SQ66K74 1059 aaPredicted RBP18.26■□□□□ 0.51
SEMA3F-208ENST00000470737 CRAMP1Q96RY5 1269 aa18.26■□□□□ 0.51
SEMA3F-208ENST00000470737 TSPYL4Q9UJ04 414 aa18.26■□□□□ 0.51
SEMA3F-208ENST00000470737 TCERG1O14776 1098 aaKnown RBP18.25■□□□□ 0.51
SEMA3F-208ENST00000470737 FOXN1O15353 648 aa18.25■□□□□ 0.51
SEMA3F-208ENST00000470737 GIGYF2Q6Y7W6 1299 aaKnown RBP18.25■□□□□ 0.51
SEMA3F-208ENST00000470737 ZNF34Q8IZ26 560 aa18.25■□□□□ 0.51
SEMA3F-208ENST00000470737 SNED1Q8TER0 1413 aa18.24■□□□□ 0.51
SEMA3F-208ENST00000470737 NTSR2O95665 410 aa18.24■□□□□ 0.51
SEMA3F-208ENST00000470737 CTCFP49711 727 aaPredicted RBP18.24■□□□□ 0.51
SEMA3F-208ENST00000470737 NIM1KQ8IY84 436 aa18.24■□□□□ 0.51
SEMA3F-208ENST00000470737 NLRP3Q96P20 1036 aa18.24■□□□□ 0.51
SEMA3F-208ENST00000470737 PRDM10Q9NQV6 1147 aa18.24■□□□□ 0.51
SEMA3F-208ENST00000470737 EIF2S2P20042 333 aaKnown RBP18.23■□□□□ 0.51
SEMA3F-208ENST00000470737 DEFB115Q30KQ5 88 aa18.23■□□□□ 0.51
SEMA3F-208ENST00000470737 ABT1Q9ULW3 272 aaKnown RBP18.23■□□□□ 0.51
SEMA3F-208ENST00000470737 UTP14AQ9BVJ6 771 aaKnown RBP18.22■□□□□ 0.51
SEMA3F-208ENST00000470737 RASSF10A6NK89 507 aa18.21■□□□□ 0.51
SEMA3F-208ENST00000470737 PPIP5K2O43314 1243 aa18.21■□□□□ 0.51
SEMA3F-208ENST00000470737 COL4A5P29400 1685 aa18.2■□□□□ 0.5
SEMA3F-208ENST00000470737 RIPK4P57078 832 aa18.2■□□□□ 0.5
SEMA3F-208ENST00000470737 LMOD3Q0VAK6 560 aa18.2■□□□□ 0.5
SEMA3F-208ENST00000470737 HSP90AB3PQ58FF7 597 aa18.2■□□□□ 0.5
SEMA3F-208ENST00000470737 USP50Q70EL3 339 aaPredicted RBP18.2■□□□□ 0.5
SEMA3F-208ENST00000470737 SUPT20HQ8NEM7 779 aa18.2■□□□□ 0.5
SEMA3F-208ENST00000470737 SCNN1DP51172 638 aa18.19■□□□□ 0.5
SEMA3F-208ENST00000470737 MAP2K1Q02750 393 aaPredicted RBP18.19■□□□□ 0.5
SEMA3F-208ENST00000470737 LTBP1Q14766 1721 aa18.19■□□□□ 0.5
SEMA3F-208ENST00000470737 PAXIP1Q6ZW49 1069 aaPredicted RBP18.19■□□□□ 0.5
SEMA3F-208ENST00000470737 VPS33BQ9H267 617 aa18.19■□□□□ 0.5
SEMA3F-208ENST00000470737 DDX21Q9NR30 783 aaKnown RBP eCLIP18.19■□□□□ 0.5
SEMA3F-208ENST00000470737 BABAM1Q9NWV8 329 aa18.19■□□□□ 0.5
SEMA3F-208ENST00000470737 WBP1LQ9NX94 342 aa18.19■□□□□ 0.5
SEMA3F-208ENST00000470737 ANKRD36CQ5JPF3 1778 aa18.19■□□□□ 0.5
SEMA3F-208ENST00000470737 TRPM7Q96QT4 1865 aa18.18■□□□□ 0.5
SEMA3F-208ENST00000470737 EPS15P42566 896 aa18.18■□□□□ 0.5
SEMA3F-208ENST00000470737 AOC3Q16853 763 aa18.18■□□□□ 0.5
SEMA3F-208ENST00000470737 C3orf67Q6ZVT6 689 aa18.18■□□□□ 0.5
SEMA3F-208ENST00000470737 ATP6V0A2Q9Y487 856 aa18.18■□□□□ 0.5
SEMA3F-208ENST00000470737 WDR33Q9C0J8 1336 aaKnown RBP18.18■□□□□ 0.5
SEMA3F-208ENST00000470737 LBX1P52954 281 aa18.17■□□□□ 0.5
SEMA3F-208ENST00000470737 SLC10A5Q5PT55 438 aa18.17■□□□□ 0.5
SEMA3F-208ENST00000470737 ABCC4O15439 1325 aa18.17■□□□□ 0.5
SEMA3F-208ENST00000470737 ANXA1P04083 346 aa18.16■□□□□ 0.5
SEMA3F-208ENST00000470737 ECE1P42892 770 aa18.16■□□□□ 0.5
SEMA3F-208ENST00000470737 AIMP1Q12904 312 aaKnown RBP18.16■□□□□ 0.5
SEMA3F-208ENST00000470737 PDIA6Q15084 440 aa18.16■□□□□ 0.5
SEMA3F-208ENST00000470737 LAMB2P55268 1798 aa18.15■□□□□ 0.5
SEMA3F-208ENST00000470737 BBOX1O75936 387 aa18.15■□□□□ 0.5
SEMA3F-208ENST00000470737 RALBP1Q15311 655 aa18.15■□□□□ 0.5
SEMA3F-208ENST00000470737 PROSER3Q2NL68 480 aa18.15■□□□□ 0.5
SEMA3F-208ENST00000470737 DPP8Q6V1X1 898 aaPredicted RBP18.15■□□□□ 0.5
SEMA3F-208ENST00000470737 DDX46Q7L014 1031 aaKnown RBP18.15■□□□□ 0.5
SEMA3F-208ENST00000470737 COPS6Q7L5N1 327 aa18.15■□□□□ 0.5
SEMA3F-208ENST00000470737 LRP10Q7Z4F1 713 aa18.15■□□□□ 0.5
SEMA3F-208ENST00000470737 NECTIN2Q92692 538 aa18.15■□□□□ 0.5
SEMA3F-208ENST00000470737 BEGAINQ9BUH8 593 aa18.15■□□□□ 0.5
SEMA3F-208ENST00000470737 ADARB2Q9NS39 739 aaKnown RBP18.15■□□□□ 0.5
SEMA3F-208ENST00000470737 ZNRF3Q9ULT6 936 aa18.15■□□□□ 0.5
SEMA3F-208ENST00000470737 TMPOP42166 694 aaKnown RBP18.14■□□□□ 0.49
SEMA3F-208ENST00000470737 GRM1Q13255 1194 aa18.14■□□□□ 0.49
SEMA3F-208ENST00000470737 SLC51AQ86UW1 340 aa18.14■□□□□ 0.49
SEMA3F-208ENST00000470737 SP8Q8IXZ3 490 aa18.14■□□□□ 0.49
SEMA3F-208ENST00000470737 MPNDQ8N594 471 aa18.14■□□□□ 0.49
SEMA3F-208ENST00000470737 XAGE3Q8WTP9 111 aa18.14■□□□□ 0.49
SEMA3F-208ENST00000470737 GPRC5DQ9NZD1 345 aa18.14■□□□□ 0.49
SEMA3F-208ENST00000470737 TRMT112Q9UI30 125 aaKnown RBP18.14■□□□□ 0.49
SEMA3F-208ENST00000470737 CIAPIN1Q6FI81 312 aa18.13■□□□□ 0.49
SEMA3F-208ENST00000470737 NLRP10Q86W26 655 aa18.13■□□□□ 0.49
SEMA3F-208ENST00000470737 CAPNS2Q96L46 248 aa18.13■□□□□ 0.49
SEMA3F-208ENST00000470737 BCL2L13Q9BXK5 485 aa18.13■□□□□ 0.49
SEMA3F-208ENST00000470737 RTFDC1Q9BY42 306 aaPredicted RBP18.13■□□□□ 0.49
SEMA3F-208ENST00000470737 SH3TC1Q8TE82 1336 aa18.13■□□□□ 0.49
SEMA3F-208ENST00000470737 HSPA8P11142 646 aaKnown RBP18.12■□□□□ 0.49
SEMA3F-208ENST00000470737 HCLS1P14317 486 aaPredicted RBP18.12■□□□□ 0.49
SEMA3F-208ENST00000470737 CXCL9Q07325 125 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms