RNA–Protein interactions for RNA: ENST00000470563.5

RBM39-227, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 384 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-227ENST00000470563 PARP2Q9UGN5 583 aa8.75□□□□□ -1.01
RBM39-227ENST00000470563 PNMA6FA0A0J9YX94 578 aa8.74□□□□□ -1.01
RBM39-227ENST00000470563 EPB42P16452 691 aa8.74□□□□□ -1.01
RBM39-227ENST00000470563 MSX1P28360 303 aa8.74□□□□□ -1.01
RBM39-227ENST00000470563 MAPK8P45983 427 aa8.74□□□□□ -1.01
RBM39-227ENST00000470563 XPCQ01831 940 aaPredicted RBP8.74□□□□□ -1.01
RBM39-227ENST00000470563 GPR152Q8TDT2 470 aa8.74□□□□□ -1.01
RBM39-227ENST00000470563 SNX29Q8TEQ0 813 aa8.74□□□□□ -1.01
RBM39-227ENST00000470563 DUSP9Q99956 384 aaKnown RBP8.74□□□□□ -1.01
RBM39-227ENST00000470563 TIMMDC1Q9NPL8 285 aa8.74□□□□□ -1.01
RBM39-227ENST00000470563 PDZRN3Q9UPQ7 1066 aa8.74□□□□□ -1.01
RBM39-227ENST00000470563 POTECB2RU33 542 aa8.73□□□□□ -1.01
RBM39-227ENST00000470563 SORBS3O60504 671 aa8.73□□□□□ -1.01
RBM39-227ENST00000470563 TYRO3Q06418 890 aa8.73□□□□□ -1.01
RBM39-227ENST00000470563 ZNF280CQ8ND82 737 aa8.73□□□□□ -1.01
RBM39-227ENST00000470563 AIDAQ96BJ3 306 aa8.73□□□□□ -1.01
RBM39-227ENST00000470563 KCNMB2Q9Y691 235 aa8.73□□□□□ -1.01
RBM39-227ENST00000470563 EIF1AYO14602 144 aaKnown RBP8.72□□□□□ -1.01
RBM39-227ENST00000470563 CPNE3O75131 537 aaKnown RBP8.72□□□□□ -1.01
RBM39-227ENST00000470563 TRIM46Q7Z4K8 759 aa8.72□□□□□ -1.01
RBM39-227ENST00000470563 TTC16Q8NEE8 873 aa8.72□□□□□ -1.01
RBM39-227ENST00000470563 BACH2Q9BYV9 841 aa8.72□□□□□ -1.01
RBM39-227ENST00000470563 EFCC1Q9HA90 598 aa8.72□□□□□ -1.01
RBM39-227ENST00000470563 A0A1W2PNR3 127 aa8.71□□□□□ -1.02
RBM39-227ENST00000470563 F11P03951 625 aa8.71□□□□□ -1.02
RBM39-227ENST00000470563 BICDL1Q6ZP65 573 aa8.71□□□□□ -1.02
RBM39-227ENST00000470563 PRICKLE2Q7Z3G6 844 aa8.71□□□□□ -1.02
RBM39-227ENST00000470563 HSH2DQ96JZ2 352 aa8.71□□□□□ -1.02
RBM39-227ENST00000470563 RTCBQ9Y3I0 505 aaKnown RBP8.71□□□□□ -1.02
RBM39-227ENST00000470563 AK5Q9Y6K8 562 aa8.71□□□□□ -1.02
RBM39-227ENST00000470563 TNFRSF21O75509 655 aa8.7□□□□□ -1.02
RBM39-227ENST00000470563 PHKA2P46019 1235 aa8.7□□□□□ -1.02
RBM39-227ENST00000470563 PSMD2Q13200 908 aa8.7□□□□□ -1.02
RBM39-227ENST00000470563 LAMC2Q13753 1193 aa8.7□□□□□ -1.02
RBM39-227ENST00000470563 TRIP4Q15650 581 aaPredicted RBP8.7□□□□□ -1.02
RBM39-227ENST00000470563 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.7□□□□□ -1.026e-21■□□□□ 10.2
RBM39-227ENST00000470563 SRCIN1Q9C0H9 1055 aa8.7□□□□□ -1.02
RBM39-227ENST00000470563 SPG7Q9UQ90 795 aa8.7□□□□□ -1.02
RBM39-227ENST00000470563 NRG2O14511 850 aaPredicted RBP8.69□□□□□ -1.02
RBM39-227ENST00000470563 FAM157BP0CG42 384 aa8.69□□□□□ -1.02
RBM39-227ENST00000470563 GRNP28799 593 aaKnown RBP8.69□□□□□ -1.02
RBM39-227ENST00000470563 ZC3H6P61129 1189 aaKnown RBP8.69□□□□□ -1.02
RBM39-227ENST00000470563 KLRG1Q96E93 195 aa8.69□□□□□ -1.02
RBM39-227ENST00000470563 CRELD1Q96HD1 420 aa8.69□□□□□ -1.02
RBM39-227ENST00000470563 MRS2Q9HD23 443 aa8.69□□□□□ -1.02
RBM39-227ENST00000470563 NEUROD4Q9HD90 331 aa8.69□□□□□ -1.02
RBM39-227ENST00000470563 WWC3Q9ULE0 1092 aa8.69□□□□□ -1.02
RBM39-227ENST00000470563 FAM187AA6NFU0 413 aa8.68□□□□□ -1.02
RBM39-227ENST00000470563 VEGFBP49765 207 aa8.68□□□□□ -1.02
RBM39-227ENST00000470563 ORC1Q13415 861 aa8.68□□□□□ -1.02
RBM39-227ENST00000470563 TSNAXIP1Q2TAA8 658 aa8.68□□□□□ -1.02
RBM39-227ENST00000470563 C6orf118Q5T5N4 469 aa8.68□□□□□ -1.02
RBM39-227ENST00000470563 PMEPA1Q969W9 287 aa8.68□□□□□ -1.02
RBM39-227ENST00000470563 GMCL1Q96IK5 515 aa8.68□□□□□ -1.02
RBM39-227ENST00000470563 ZFYVE28Q9HCC9 887 aa8.68□□□□□ -1.02
RBM39-227ENST00000470563 EFSO43281 561 aa8.67□□□□□ -1.02
RBM39-227ENST00000470563 HOXD8P13378 290 aaPredicted RBP8.67□□□□□ -1.02
RBM39-227ENST00000470563 LAPTM4AQ15012 233 aa8.67□□□□□ -1.02
RBM39-227ENST00000470563 C8orf34Q49A92 452 aa8.67□□□□□ -1.02
RBM39-227ENST00000470563 ARSJQ5FYB0 599 aaPredicted RBP8.67□□□□□ -1.02
RBM39-227ENST00000470563 FIGNL1Q6PIW4 674 aa8.67□□□□□ -1.02
RBM39-227ENST00000470563 METTL16Q86W50 562 aaKnown RBP8.67□□□□□ -1.02
RBM39-227ENST00000470563 ANKRD24Q8TF21 1146 aa8.67□□□□□ -1.02
RBM39-227ENST00000470563 ELP3Q9H9T3 547 aa8.67□□□□□ -1.02
RBM39-227ENST00000470563 SENP3-EIF4A1A0A087X0R7 540 aa8.66□□□□□ -1.02
RBM39-227ENST00000470563 UBAP1LF5GYI3 381 aa8.66□□□□□ -1.02
RBM39-227ENST00000470563 LRRC69Q6ZNQ3 347 aa8.66□□□□□ -1.02
RBM39-227ENST00000470563 GALNT12Q8IXK2 581 aa8.66□□□□□ -1.02
RBM39-227ENST00000470563 HDLBPQ00341 1268 aaKnown RBP8.65□□□□□ -1.02
RBM39-227ENST00000470563 FANCCQ00597 558 aa8.65□□□□□ -1.02
RBM39-227ENST00000470563 EFHC2Q5JST6 749 aa8.65□□□□□ -1.02
RBM39-227ENST00000470563 ZNF438Q7Z4V0 828 aa8.65□□□□□ -1.02
RBM39-227ENST00000470563 NLRP13Q86W25 1043 aa8.65□□□□□ -1.02
RBM39-227ENST00000470563 PGBD3Q8N328 593 aa8.65□□□□□ -1.02
RBM39-227ENST00000470563 CCDC74AQ96AQ1 378 aa8.65□□□□□ -1.02
RBM39-227ENST00000470563 ZFP42Q96MM3 310 aa8.65□□□□□ -1.02
RBM39-227ENST00000470563 DNMT3LQ9UJW3 386 aa8.65□□□□□ -1.02
RBM39-227ENST00000470563 AXIN1O15169 862 aa8.64□□□□□ -1.03
RBM39-227ENST00000470563 IGSF3O75054 1194 aa8.64□□□□□ -1.03
RBM39-227ENST00000470563 ST13P50502 369 aaKnown RBP8.64□□□□□ -1.03
RBM39-227ENST00000470563 PTPN12Q05209 780 aaKnown RBP8.64□□□□□ -1.03
RBM39-227ENST00000470563 UBAP2LQ14157 1087 aaKnown RBP8.64□□□□□ -1.03
RBM39-227ENST00000470563 SETDB2Q96T68 719 aa8.64□□□□□ -1.03
RBM39-227ENST00000470563 CHRDQ9H2X0 955 aa8.64□□□□□ -1.03
RBM39-227ENST00000470563 C12orf49Q9H741 205 aa8.64□□□□□ -1.03
RBM39-227ENST00000470563 BRD7Q9NPI1 651 aa8.64□□□□□ -1.03
RBM39-227ENST00000470563 BMP1P13497 986 aa8.63□□□□□ -1.03
RBM39-227ENST00000470563 RHOQP17081 205 aa8.63□□□□□ -1.03
RBM39-227ENST00000470563 RAD51AP2Q09MP3 1159 aa8.63□□□□□ -1.03
RBM39-227ENST00000470563 CEP63Q96MT8 703 aa8.63□□□□□ -1.03
RBM39-227ENST00000470563 TGIF2Q9GZN2 237 aa8.63□□□□□ -1.03
RBM39-227ENST00000470563 ABI2Q9NYB9 513 aaPredicted RBP8.63□□□□□ -1.03
RBM39-227ENST00000470563 VTI1BQ9UEU0 232 aa8.63□□□□□ -1.03
RBM39-227ENST00000470563 GJA3Q9Y6H8 435 aa8.63□□□□□ -1.03
RBM39-227ENST00000470563 USP31Q70CQ4 1352 aa8.62□□□□□ -1.03
RBM39-227ENST00000470563 SLC35F4A4IF30 521 aa8.62□□□□□ -1.03
RBM39-227ENST00000470563 PHACTR2O75167 634 aa8.62□□□□□ -1.03
RBM39-227ENST00000470563 XYLBO75191 536 aa8.62□□□□□ -1.03
RBM39-227ENST00000470563 CTSHP09668 335 aa8.62□□□□□ -1.03
RBM39-227ENST00000470563 EIF4BP23588 611 aaKnown RBP8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms