RNA–Protein interactions for RNA: ENST00000469867.1

FAM228B-203, Transcript of family with sequence similarity 228 member B, humanhuman

TSL 1 (best)

Gene FAM228B, Length 2,495 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-203ENST00000469867 SMC1BQ8NDV3 1235 aa15.09■□□□□ 0.01
FAM228B-203ENST00000469867 DEKP35659 375 aaKnown RBP15.08■□□□□ 0.01
FAM228B-203ENST00000469867 SUSD4Q5VX71 490 aa15.08■□□□□ 0.01
FAM228B-203ENST00000469867 NYXQ9GZU5 481 aa15.08■□□□□ 0.01
FAM228B-203ENST00000469867 ZNF277Q9NRM2 450 aaPredicted RBP15.08■□□□□ 0.01
FAM228B-203ENST00000469867 GIGYF2Q6Y7W6 1299 aaKnown RBP15.08■□□□□ 0
FAM228B-203ENST00000469867 LRP10Q7Z4F1 713 aa15.08■□□□□ 0
FAM228B-203ENST00000469867 DICER1Q9UPY3 1922 aaKnown RBP15.08■□□□□ 0
FAM228B-203ENST00000469867 AIMP1Q12904 312 aaKnown RBP15.07■□□□□ 0
FAM228B-203ENST00000469867 TRIM35Q9UPQ4 493 aa15.07■□□□□ 0
FAM228B-203ENST00000469867 ALDH1B1P30837 517 aa15.07■□□□□ 0
FAM228B-203ENST00000469867 CRY2Q49AN0 593 aa15.07■□□□□ 0
FAM228B-203ENST00000469867 ZNF428Q96B54 188 aa15.07■□□□□ 0
FAM228B-203ENST00000469867 RUNDC1Q96C34 613 aa15.07■□□□□ 0
FAM228B-203ENST00000469867 ERBB4Q15303 1308 aa15.06■□□□□ 0
FAM228B-203ENST00000469867 ARFGEF2Q9Y6D5 1785 aa15.06■□□□□ 0
FAM228B-203ENST00000469867 SLC51AQ86UW1 340 aa15.06■□□□□ 0
FAM228B-203ENST00000469867 ZNF34Q8IZ26 560 aa15.06■□□□□ 0
FAM228B-203ENST00000469867 ZBED9Q6R2W3 1325 aa15.06■□□□□ 0
FAM228B-203ENST00000469867 TCERG1O14776 1098 aaKnown RBP15.06■□□□□ 0
FAM228B-203ENST00000469867 NBR1Q14596 966 aa15.06■□□□□ 0
FAM228B-203ENST00000469867 WDR90Q96KV7 1748 aa15.06■□□□□ 0
FAM228B-203ENST00000469867 FKBP4Q02790 459 aaKnown RBP eCLIP15.05■□□□□ 0
FAM228B-203ENST00000469867 COPS6Q7L5N1 327 aa15.05■□□□□ 0
FAM228B-203ENST00000469867 RPGRQ92834 1020 aaKnown RBP15.05■□□□□ 0
FAM228B-203ENST00000469867 CHL1O00533 1208 aa15.05■□□□□ -0
FAM228B-203ENST00000469867 NTSR2O95665 410 aa15.05■□□□□ -0
FAM228B-203ENST00000469867 POTEIP0CG38 1075 aa15.05■□□□□ -0
FAM228B-203ENST00000469867 POTEJP0CG39 1038 aa15.05■□□□□ -0
FAM228B-203ENST00000469867 C3orf67Q6ZVT6 689 aa15.05■□□□□ -0
FAM228B-203ENST00000469867 BABAM1Q9NWV8 329 aa15.05■□□□□ -0
FAM228B-203ENST00000469867 RTKN2Q8IZC4 609 aa15.04■□□□□ -0
FAM228B-203ENST00000469867 XAGE3Q8WTP9 111 aa15.04■□□□□ -0
FAM228B-203ENST00000469867 FANCIQ9NVI1 1328 aa15.03■□□□□ -0
FAM228B-203ENST00000469867 PPP1R42Q7Z4L9 355 aa15.03■□□□□ -0
FAM228B-203ENST00000469867 CHPF2Q9P2E5 772 aa15.03■□□□□ -0
FAM228B-203ENST00000469867 ZNF541Q9H0D2 1346 aa15.03■□□□□ -0
FAM228B-203ENST00000469867 SYNE4Q8N205 404 aa15.02■□□□□ -0
FAM228B-203ENST00000469867 KLRG1Q96E93 195 aa15.02■□□□□ -0
FAM228B-203ENST00000469867 PARP10Q53GL7 1025 aa15.02□□□□□ -0.01
FAM228B-203ENST00000469867 HOXA10P31260 410 aaPredicted RBP15.01□□□□□ -0.01
FAM228B-203ENST00000469867 IARSP41252 1262 aaKnown RBP15.01□□□□□ -0.01
FAM228B-203ENST00000469867 HDGFL1Q5TGJ6 251 aa15.01□□□□□ -0.01
FAM228B-203ENST00000469867 NLRP3Q96P20 1036 aa15.01□□□□□ -0.01
FAM228B-203ENST00000469867 UTP14AQ9BVJ6 771 aaKnown RBP15.01□□□□□ -0.01
FAM228B-203ENST00000469867 DDX21Q9NR30 783 aaKnown RBP eCLIP15.01□□□□□ -0.01
FAM228B-203ENST00000469867 IBTKQ9P2D0 1353 aaPredicted RBP15.01□□□□□ -0.01
FAM228B-203ENST00000469867 APAF1O14727 1248 aa15.01□□□□□ -0.01
FAM228B-203ENST00000469867 HCLS1P14317 486 aaPredicted RBP15□□□□□ -0.01
FAM228B-203ENST00000469867 JDP2Q8WYK2 163 aa15□□□□□ -0.01
FAM228B-203ENST00000469867 CFAP44Q96MT7 982 aa15□□□□□ -0.01
FAM228B-203ENST00000469867 RNF123Q5XPI4 1314 aa15□□□□□ -0.01
FAM228B-203ENST00000469867 SNED1Q8TER0 1413 aa14.99□□□□□ -0.01
FAM228B-203ENST00000469867 NLRP10Q86W26 655 aa14.99□□□□□ -0.01
FAM228B-203ENST00000469867 RBM17Q96I25 401 aaKnown RBP14.99□□□□□ -0.01
FAM228B-203ENST00000469867 PSMD1Q99460 953 aa14.99□□□□□ -0.01
FAM228B-203ENST00000469867 MBIPQ9NS73 344 aa14.99□□□□□ -0.01
FAM228B-203ENST00000469867 IQCA1LA6NCM1 817 aa14.99□□□□□ -0.01
FAM228B-203ENST00000469867 PPEF1O14829 653 aaPredicted RBP14.99□□□□□ -0.01
FAM228B-203ENST00000469867 B4GALNT3Q6L9W6 998 aa14.99□□□□□ -0.01
FAM228B-203ENST00000469867 L3MBTL3Q96JM7 780 aaPredicted RBP14.99□□□□□ -0.01
FAM228B-203ENST00000469867 CRAMP1Q96RY5 1269 aa14.99□□□□□ -0.01
FAM228B-203ENST00000469867 TRMT112Q9UI30 125 aaKnown RBP14.99□□□□□ -0.01
FAM228B-203ENST00000469867 ELL2O00472 640 aaPredicted RBP14.98□□□□□ -0.01
FAM228B-203ENST00000469867 TCIRG1Q13488 830 aa14.98□□□□□ -0.01
FAM228B-203ENST00000469867 EAPPQ56P03 285 aaPredicted RBP14.98□□□□□ -0.01
FAM228B-203ENST00000469867 TAF1DQ9H5J8 278 aaPredicted RBP14.98□□□□□ -0.01
FAM228B-203ENST00000469867 RIC1Q4ADV7 1423 aa14.98□□□□□ -0.01
FAM228B-203ENST00000469867 FZD9O00144 591 aa14.98□□□□□ -0.01
FAM228B-203ENST00000469867 DUSP27Q5VZP5 1158 aa14.98□□□□□ -0.01
FAM228B-203ENST00000469867 CHADLQ6NUI6 762 aa14.98□□□□□ -0.01
FAM228B-203ENST00000469867 COL4A5P29400 1685 aa14.97□□□□□ -0.01
FAM228B-203ENST00000469867 HSP90AB3PQ58FF7 597 aa14.97□□□□□ -0.01
FAM228B-203ENST00000469867 CC2D2BQ6DHV5 1058 aa14.97□□□□□ -0.01
FAM228B-203ENST00000469867 DBF4Q9UBU7 674 aaPredicted RBP14.97□□□□□ -0.01
FAM228B-203ENST00000469867 RTL5Q5HYW3 569 aaPredicted RBP14.97□□□□□ -0.01
FAM228B-203ENST00000469867 SLC10A5Q5PT55 438 aa14.97□□□□□ -0.01
FAM228B-203ENST00000469867 ANKRD13DQ6ZTN6 518 aa14.97□□□□□ -0.01
FAM228B-203ENST00000469867 LARGE2Q8N3Y3 721 aa14.97□□□□□ -0.01
FAM228B-203ENST00000469867 ABCC4O15439 1325 aa14.96□□□□□ -0.01
FAM228B-203ENST00000469867 ATP5J2-PTCD1G3V325 749 aa14.96□□□□□ -0.01
FAM228B-203ENST00000469867 IFFO2Q5TF58 517 aa14.96□□□□□ -0.01
FAM228B-203ENST00000469867 GJA3Q9Y6H8 435 aa14.96□□□□□ -0.01
FAM228B-203ENST00000469867 SH3TC1Q8TE82 1336 aa14.96□□□□□ -0.02
FAM228B-203ENST00000469867 JMYQ8N9B5 988 aa14.95□□□□□ -0.02
FAM228B-203ENST00000469867 CDCA7LQ96GN5 454 aa14.95□□□□□ -0.02
FAM228B-203ENST00000469867 HACL1Q9UJ83 578 aa14.95□□□□□ -0.02
FAM228B-203ENST00000469867 HOXB7P09629 217 aa14.95□□□□□ -0.02
FAM228B-203ENST00000469867 GPC2Q8N158 579 aa14.95□□□□□ -0.02
FAM228B-203ENST00000469867 PLBD2Q8NHP8 589 aa14.95□□□□□ -0.02
FAM228B-203ENST00000469867 CLEC11AQ9Y240 323 aa14.95□□□□□ -0.02
FAM228B-203ENST00000469867 SCN4AP35499 1836 aa14.95□□□□□ -0.02
FAM228B-203ENST00000469867 ANKRD36CQ5JPF3 1778 aa14.95□□□□□ -0.02
FAM228B-203ENST00000469867 EPHX2P34913 555 aa14.94□□□□□ -0.02
FAM228B-203ENST00000469867 LDHDQ86WU2 507 aa14.94□□□□□ -0.02
FAM228B-203ENST00000469867 FAM89AQ96GI7 184 aa14.94□□□□□ -0.02
FAM228B-203ENST00000469867 TMX4Q9H1E5 349 aaPredicted RBP14.94□□□□□ -0.02
FAM228B-203ENST00000469867 ATP6V0A2Q9Y487 856 aa14.94□□□□□ -0.02
FAM228B-203ENST00000469867 AOC3Q16853 763 aa14.94□□□□□ -0.02
FAM228B-203ENST00000469867 TAF1P21675 1872 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms