RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 LRFN2Q9ULH4 789 aa9.65□□□□□ -0.86
PTCD3-208ENST00000469585 CEP162Q5TB80 1403 aa9.65□□□□□ -0.87
PTCD3-208ENST00000469585 DIP2BQ9P265 1576 aa9.64□□□□□ -0.87
PTCD3-208ENST00000469585 A0A1B0GTH6 734 aa9.64□□□□□ -0.87
PTCD3-208ENST00000469585 DYRK1BQ9Y463 629 aa9.64□□□□□ -0.87
PTCD3-208ENST00000469585 CCDC18Q5T9S5 1454 aa9.64□□□□□ -0.87
PTCD3-208ENST00000469585 ABL1P00519 1130 aa9.63□□□□□ -0.87
PTCD3-208ENST00000469585 SNRPBP14678 240 aaKnown RBP9.63□□□□□ -0.87
PTCD3-208ENST00000469585 MSX1P28360 303 aa9.63□□□□□ -0.87
PTCD3-208ENST00000469585 PTSQ03393 145 aa9.63□□□□□ -0.87
PTCD3-208ENST00000469585 ZNF211Q13398 564 aaPredicted RBP9.63□□□□□ -0.87
PTCD3-208ENST00000469585 HELQQ8TDG4 1101 aa9.63□□□□□ -0.87
PTCD3-208ENST00000469585 GZF1Q9H116 711 aaPredicted RBP9.63□□□□□ -0.87
PTCD3-208ENST00000469585 SLC35F4A4IF30 521 aa9.62□□□□□ -0.87
PTCD3-208ENST00000469585 SOWAHDA6NJG2 315 aa9.62□□□□□ -0.87
PTCD3-208ENST00000469585 TNFRSF10BO14763 440 aa9.62□□□□□ -0.87
PTCD3-208ENST00000469585 ICMTO60725 284 aa9.62□□□□□ -0.87
PTCD3-208ENST00000469585 TATP17735 454 aaPredicted RBP9.62□□□□□ -0.87
PTCD3-208ENST00000469585 KLRG1Q96E93 195 aa9.62□□□□□ -0.87
PTCD3-208ENST00000469585 ANO2Q9NQ90 1003 aa9.62□□□□□ -0.87
PTCD3-208ENST00000469585 EPRSP07814 1512 aaKnown RBP9.61□□□□□ -0.87
PTCD3-208ENST00000469585 ATP10BO94823 1461 aa9.61□□□□□ -0.87
PTCD3-208ENST00000469585 NUP153P49790 1475 aaKnown RBP9.61□□□□□ -0.87
PTCD3-208ENST00000469585 FYCO1Q9BQS8 1478 aa9.61□□□□□ -0.87
PTCD3-208ENST00000469585 LOC105371045A0A1W2PR82 267 aa9.61□□□□□ -0.87
PTCD3-208ENST00000469585 POTECB2RU33 542 aa9.61□□□□□ -0.87
PTCD3-208ENST00000469585 MTMR3Q13615 1198 aa9.61□□□□□ -0.87
PTCD3-208ENST00000469585 GPC6Q9Y625 555 aaPredicted RBP9.61□□□□□ -0.87
PTCD3-208ENST00000469585 CD109Q6YHK3 1445 aa9.61□□□□□ -0.87
PTCD3-208ENST00000469585 CASKIN1Q8WXD9 1431 aa9.61□□□□□ -0.87
PTCD3-208ENST00000469585 GLI2P10070 1586 aa9.61□□□□□ -0.87
PTCD3-208ENST00000469585 TSPOAP1O95153 1857 aa9.6□□□□□ -0.87
PTCD3-208ENST00000469585 C11orf95C9JLR9 678 aaPredicted RBP9.6□□□□□ -0.87
PTCD3-208ENST00000469585 F11P03951 625 aa9.6□□□□□ -0.87
PTCD3-208ENST00000469585 NPR3P17342 541 aa9.6□□□□□ -0.87
PTCD3-208ENST00000469585 FKBP4Q02790 459 aaKnown RBP eCLIP9.6□□□□□ -0.87
PTCD3-208ENST00000469585 SF3B2Q13435 895 aaKnown RBP9.6□□□□□ -0.87
PTCD3-208ENST00000469585 DGKZQ13574 1117 aa9.6□□□□□ -0.87
PTCD3-208ENST00000469585 ECM1Q16610 540 aa9.6□□□□□ -0.87
PTCD3-208ENST00000469585 C11orf91Q3C1V1 193 aa9.6□□□□□ -0.87
PTCD3-208ENST00000469585 RHPN1Q8TCX5 695 aa9.6□□□□□ -0.87
PTCD3-208ENST00000469585 ZIC5Q96T25 663 aa9.6□□□□□ -0.87
PTCD3-208ENST00000469585 CRISPLD1Q9H336 500 aa9.6□□□□□ -0.87
PTCD3-208ENST00000469585 KIF13AQ9H1H9 1805 aa9.6□□□□□ -0.87
PTCD3-208ENST00000469585 CFAP43Q8NDM7 1665 aa9.59□□□□□ -0.87
PTCD3-208ENST00000469585 KLK14Q9P0G3 267 aa9.59□□□□□ -0.87
PTCD3-208ENST00000469585 BCS1LQ9Y276 419 aa9.59□□□□□ -0.87
PTCD3-208ENST00000469585 H3BRB1 525 aa9.58□□□□□ -0.88
PTCD3-208ENST00000469585 FAM26DQ5JW98 314 aa9.58□□□□□ -0.88
PTCD3-208ENST00000469585 SND1Q7KZF4 910 aaKnown RBP eCLIP9.58□□□□□ -0.88
PTCD3-208ENST00000469585 GAS2L1Q99501 681 aaPredicted RBP9.58□□□□□ -0.88
PTCD3-208ENST00000469585 TUT1Q9H6E5 874 aaKnown RBP9.58□□□□□ -0.88
PTCD3-208ENST00000469585 GPAMQ9HCL2 828 aa9.58□□□□□ -0.88
PTCD3-208ENST00000469585 STIM2Q9P246 746 aa9.58□□□□□ -0.88
PTCD3-208ENST00000469585 PHLDB1Q86UU1 1377 aa9.58□□□□□ -0.88
PTCD3-208ENST00000469585 BICDL1Q6ZP65 573 aa9.57□□□□□ -0.88
PTCD3-208ENST00000469585 CCDC155Q8N6L0 562 aa9.57□□□□□ -0.88
PTCD3-208ENST00000469585 SUSD3Q96L08 255 aa9.57□□□□□ -0.88
PTCD3-208ENST00000469585 MTUS2Q5JR59 1369 aa9.57□□□□□ -0.88
PTCD3-208ENST00000469585 PCF11O94913 1555 aaKnown RBP9.57□□□□□ -0.88
PTCD3-208ENST00000469585 CDK13Q14004 1512 aaKnown RBP9.56□□□□□ -0.88
PTCD3-208ENST00000469585 KIF14Q15058 1648 aa9.56□□□□□ -0.88
PTCD3-208ENST00000469585 A0A1W2PNR3 127 aa9.56□□□□□ -0.88
PTCD3-208ENST00000469585 MPSTP25325 297 aa9.56□□□□□ -0.88
PTCD3-208ENST00000469585 BRD2P25440 801 aaKnown RBP9.56□□□□□ -0.88
PTCD3-208ENST00000469585 ARSJQ5FYB0 599 aaPredicted RBP9.56□□□□□ -0.88
PTCD3-208ENST00000469585 GLYCTKQ8IVS8 523 aa9.56□□□□□ -0.88
PTCD3-208ENST00000469585 ETFBKMTQ8IXQ9 262 aa9.56□□□□□ -0.88
PTCD3-208ENST00000469585 ZNF280CQ8ND82 737 aa9.56□□□□□ -0.88
PTCD3-208ENST00000469585 RUBCNLQ9H714 662 aa9.56□□□□□ -0.88
PTCD3-208ENST00000469585 KDM6BO15054 1643 aa9.56□□□□□ -0.88
PTCD3-208ENST00000469585 CFAP74Q9C0B2 1584 aa9.55□□□□□ -0.88
PTCD3-208ENST00000469585 THBS1P07996 1170 aa9.55□□□□□ -0.88
PTCD3-208ENST00000469585 IFT43Q96FT9 208 aa9.55□□□□□ -0.88
PTCD3-208ENST00000469585 HSH2DQ96JZ2 352 aa9.55□□□□□ -0.88
PTCD3-208ENST00000469585 DMGDHQ9UI17 866 aaKnown RBP9.55□□□□□ -0.88
PTCD3-208ENST00000469585 MAP3K4Q9Y6R4 1608 aa9.55□□□□□ -0.88
PTCD3-208ENST00000469585 TROQ12816 1431 aaPredicted RBP9.55□□□□□ -0.88
PTCD3-208ENST00000469585 TGFBR3LH3BV60 316 aa9.54□□□□□ -0.88
PTCD3-208ENST00000469585 ZBTB39O15060 712 aa9.54□□□□□ -0.88
PTCD3-208ENST00000469585 FAM13AO94988 1023 aa9.54□□□□□ -0.88
PTCD3-208ENST00000469585 ARHGAP4P98171 946 aa9.54□□□□□ -0.88
PTCD3-208ENST00000469585 HIF1AQ16665 826 aa9.54□□□□□ -0.88
PTCD3-208ENST00000469585 IER5Q5VY09 327 aa9.54□□□□□ -0.88
PTCD3-208ENST00000469585 LRRC69Q6ZNQ3 347 aa9.54□□□□□ -0.88
PTCD3-208ENST00000469585 CUEDC1Q9NWM3 386 aaPredicted RBP9.54□□□□□ -0.88
PTCD3-208ENST00000469585 VPS8Q8N3P4 1428 aa9.54□□□□□ -0.88
PTCD3-208ENST00000469585 MAGI3Q5TCQ9 1506 aa9.53□□□□□ -0.88
PTCD3-208ENST00000469585 UBAP2LQ14157 1087 aaKnown RBP9.53□□□□□ -0.88
PTCD3-208ENST00000469585 LBRQ14739 615 aaKnown RBP9.53□□□□□ -0.88
PTCD3-208ENST00000469585 NLRP8Q86W28 1048 aa9.53□□□□□ -0.88
PTCD3-208ENST00000469585 PGBD3Q8N328 593 aa9.53□□□□□ -0.88
PTCD3-208ENST00000469585 ABTB2Q8N961 1025 aa9.53□□□□□ -0.88
PTCD3-208ENST00000469585 PODXL2Q9NZ53 605 aa9.53□□□□□ -0.88
PTCD3-208ENST00000469585 ANKIB1Q9P2G1 1089 aa9.53□□□□□ -0.88
PTCD3-208ENST00000469585 ABCA9Q8IUA7 1624 aa9.53□□□□□ -0.88
PTCD3-208ENST00000469585 ITGA6P23229 1130 aa9.52□□□□□ -0.89
PTCD3-208ENST00000469585 EIF1AXP47813 144 aaKnown RBP9.52□□□□□ -0.89
PTCD3-208ENST00000469585 DBN1Q16643 649 aa9.52□□□□□ -0.89
PTCD3-208ENST00000469585 EFCAB2Q5VUJ9 269 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms