RNA–Protein interactions for RNA: ENST00000469528.5

GAPVD1-214, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 4

Gene GAPVD1, Length 466 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-214ENST00000469528 VPS33BQ9H267 617 aa16.68■□□□□ 0.26
GAPVD1-214ENST00000469528 BABAM1Q9NWV8 329 aa16.68■□□□□ 0.26
GAPVD1-214ENST00000469528 ARFGEF2Q9Y6D5 1785 aa16.68■□□□□ 0.26
GAPVD1-214ENST00000469528 CAPN15O75808 1086 aa16.67■□□□□ 0.26
GAPVD1-214ENST00000469528 ITGBL1O95965 494 aaPredicted RBP16.67■□□□□ 0.26
GAPVD1-214ENST00000469528 CNTROBQ8N137 903 aa16.67■□□□□ 0.26
GAPVD1-214ENST00000469528 CNTNAP1P78357 1384 aa16.66■□□□□ 0.26
GAPVD1-214ENST00000469528 SUSD4Q5VX71 490 aa16.66■□□□□ 0.26
GAPVD1-214ENST00000469528 OLFM4Q6UX06 510 aa16.66■□□□□ 0.26
GAPVD1-214ENST00000469528 TTLL7Q6ZT98 887 aa16.66■□□□□ 0.26
GAPVD1-214ENST00000469528 ZNF34Q8IZ26 560 aa16.66■□□□□ 0.26
GAPVD1-214ENST00000469528 LARGE2Q8N3Y3 721 aa16.66■□□□□ 0.26
GAPVD1-214ENST00000469528 ZBTB3Q9H5J0 574 aa16.66■□□□□ 0.26
GAPVD1-214ENST00000469528 TSPYL4Q9UJ04 414 aa16.66■□□□□ 0.26
GAPVD1-214ENST00000469528 ZNF541Q9H0D2 1346 aa16.66■□□□□ 0.26
GAPVD1-214ENST00000469528 IBTKQ9P2D0 1353 aaPredicted RBP16.65■□□□□ 0.26
GAPVD1-214ENST00000469528 CACNA1SQ13698 1873 aa16.65■□□□□ 0.26
GAPVD1-214ENST00000469528 GPTP24298 496 aa16.65■□□□□ 0.26
GAPVD1-214ENST00000469528 LMOD3Q0VAK6 560 aa16.65■□□□□ 0.26
GAPVD1-214ENST00000469528 DEFB115Q30KQ5 88 aa16.65■□□□□ 0.26
GAPVD1-214ENST00000469528 SUPT20HQ8NEM7 779 aa16.65■□□□□ 0.26
GAPVD1-214ENST00000469528 GJA3Q9Y6H8 435 aa16.65■□□□□ 0.26
GAPVD1-214ENST00000469528 CTCFP49711 727 aaPredicted RBP16.64■□□□□ 0.25
GAPVD1-214ENST00000469528 RIPK4P57078 832 aa16.64■□□□□ 0.25
GAPVD1-214ENST00000469528 HSP90AB3PQ58FF7 597 aa16.64■□□□□ 0.25
GAPVD1-214ENST00000469528 UTP14AQ9BVJ6 771 aaKnown RBP16.64■□□□□ 0.25
GAPVD1-214ENST00000469528 PRDM10Q9NQV6 1147 aa16.64■□□□□ 0.25
GAPVD1-214ENST00000469528 RNF123Q5XPI4 1314 aa16.64■□□□□ 0.25
GAPVD1-214ENST00000469528 PPEF1O14829 653 aaPredicted RBP16.63■□□□□ 0.25
GAPVD1-214ENST00000469528 EIF2S2P20042 333 aaKnown RBP16.63■□□□□ 0.25
GAPVD1-214ENST00000469528 VEGFBP49765 207 aa16.63■□□□□ 0.25
GAPVD1-214ENST00000469528 SLC10A5Q5PT55 438 aa16.63■□□□□ 0.25
GAPVD1-214ENST00000469528 NIM1KQ8IY84 436 aa16.63■□□□□ 0.25
GAPVD1-214ENST00000469528 RIC1Q4ADV7 1423 aa16.62■□□□□ 0.25
GAPVD1-214ENST00000469528 BBOX1O75936 387 aa16.62■□□□□ 0.25
GAPVD1-214ENST00000469528 MAP2K1Q02750 393 aaPredicted RBP16.62■□□□□ 0.25
GAPVD1-214ENST00000469528 RALBP1Q15311 655 aa16.62■□□□□ 0.25
GAPVD1-214ENST00000469528 MAP1SQ66K74 1059 aaPredicted RBP16.62■□□□□ 0.25
GAPVD1-214ENST00000469528 USP50Q70EL3 339 aaPredicted RBP16.62■□□□□ 0.25
GAPVD1-214ENST00000469528 THUMPD2Q9BTF0 503 aaKnown RBP16.62■□□□□ 0.25
GAPVD1-214ENST00000469528 NTSR2O95665 410 aa16.61■□□□□ 0.25
GAPVD1-214ENST00000469528 ABT1Q9ULW3 272 aaKnown RBP16.61■□□□□ 0.25
GAPVD1-214ENST00000469528 ATP6V0A2Q9Y487 856 aa16.61■□□□□ 0.25
GAPVD1-214ENST00000469528 UBN2Q6ZU65 1347 aa16.61■□□□□ 0.25
GAPVD1-214ENST00000469528 RASSF10A6NK89 507 aa16.6■□□□□ 0.25
GAPVD1-214ENST00000469528 TCERG1O14776 1098 aaKnown RBP16.6■□□□□ 0.25
GAPVD1-214ENST00000469528 NUP98P52948 1817 aa16.6■□□□□ 0.25
GAPVD1-214ENST00000469528 FOXN1O15353 648 aa16.59■□□□□ 0.25
GAPVD1-214ENST00000469528 PPIP5K2O43314 1243 aa16.59■□□□□ 0.25
GAPVD1-214ENST00000469528 ECE1P42892 770 aa16.59■□□□□ 0.25
GAPVD1-214ENST00000469528 DDX21Q9NR30 783 aaKnown RBP eCLIP16.59■□□□□ 0.25
GAPVD1-214ENST00000469528 WBP1LQ9NX94 342 aa16.59■□□□□ 0.25
GAPVD1-214ENST00000469528 ABCC12Q96J65 1359 aa16.59■□□□□ 0.25
GAPVD1-214ENST00000469528 LAMB4A4D0S4 1761 aa16.59■□□□□ 0.25
GAPVD1-214ENST00000469528 DDX46Q7L014 1031 aaKnown RBP16.58■□□□□ 0.24
GAPVD1-214ENST00000469528 SP8Q8IXZ3 490 aa16.58■□□□□ 0.24
GAPVD1-214ENST00000469528 BEGAINQ9BUH8 593 aa16.58■□□□□ 0.24
GAPVD1-214ENST00000469528 ZNRF3Q9ULT6 936 aa16.58■□□□□ 0.24
GAPVD1-214ENST00000469528 WDR33Q9C0J8 1336 aaKnown RBP16.58■□□□□ 0.24
GAPVD1-214ENST00000469528 TMPOP42166 694 aaKnown RBP16.57■□□□□ 0.24
GAPVD1-214ENST00000469528 EPS15P42566 896 aa16.57■□□□□ 0.24
GAPVD1-214ENST00000469528 TNIP1Q15025 636 aa16.57■□□□□ 0.24
GAPVD1-214ENST00000469528 PDIA6Q15084 440 aa16.57■□□□□ 0.24
GAPVD1-214ENST00000469528 DPP8Q6V1X1 898 aaPredicted RBP16.57■□□□□ 0.24
GAPVD1-214ENST00000469528 COPS6Q7L5N1 327 aa16.57■□□□□ 0.24
GAPVD1-214ENST00000469528 TMC4Q7Z404 712 aa16.57■□□□□ 0.24
GAPVD1-214ENST00000469528 MPNDQ8N594 471 aa16.57■□□□□ 0.24
GAPVD1-214ENST00000469528 RTFDC1Q9BY42 306 aaPredicted RBP16.57■□□□□ 0.24
GAPVD1-214ENST00000469528 ADARB2Q9NS39 739 aaKnown RBP16.57■□□□□ 0.24
GAPVD1-214ENST00000469528 DLG5Q8TDM6 1919 aa16.57■□□□□ 0.24
GAPVD1-214ENST00000469528 KDM3BQ7LBC6 1761 aa16.56■□□□□ 0.24
GAPVD1-214ENST00000469528 SCNN1DP51172 638 aa16.56■□□□□ 0.24
GAPVD1-214ENST00000469528 AIMP1Q12904 312 aaKnown RBP16.56■□□□□ 0.24
GAPVD1-214ENST00000469528 TCIRG1Q13488 830 aa16.56■□□□□ 0.24
GAPVD1-214ENST00000469528 TRMT112Q9UI30 125 aaKnown RBP16.56■□□□□ 0.24
GAPVD1-214ENST00000469528 SNED1Q8TER0 1413 aa16.55■□□□□ 0.24
GAPVD1-214ENST00000469528 AOC3Q16853 763 aa16.55■□□□□ 0.24
GAPVD1-214ENST00000469528 SH3TC1Q8TE82 1336 aa16.54■□□□□ 0.24
GAPVD1-214ENST00000469528 LBX1P52954 281 aa16.54■□□□□ 0.24
GAPVD1-214ENST00000469528 PAXIP1Q6ZW49 1069 aaPredicted RBP16.54■□□□□ 0.24
GAPVD1-214ENST00000469528 LRP10Q7Z4F1 713 aa16.54■□□□□ 0.24
GAPVD1-214ENST00000469528 NLRP10Q86W26 655 aa16.54■□□□□ 0.24
GAPVD1-214ENST00000469528 XAGE3Q8WTP9 111 aa16.54■□□□□ 0.24
GAPVD1-214ENST00000469528 GPRC5DQ9NZD1 345 aa16.54■□□□□ 0.24
GAPVD1-214ENST00000469528 ABCC4O15439 1325 aa16.53■□□□□ 0.24
GAPVD1-214ENST00000469528 CXCL9Q07325 125 aa16.53■□□□□ 0.24
GAPVD1-214ENST00000469528 NEUROD2Q15784 382 aa16.53■□□□□ 0.24
GAPVD1-214ENST00000469528 CIAPIN1Q6FI81 312 aa16.53■□□□□ 0.24
GAPVD1-214ENST00000469528 C3orf67Q6ZVT6 689 aa16.53■□□□□ 0.24
GAPVD1-214ENST00000469528 ZC3H15Q8WU90 426 aaKnown RBP16.53■□□□□ 0.24
GAPVD1-214ENST00000469528 BCL2L13Q9BXK5 485 aa16.53■□□□□ 0.24
GAPVD1-214ENST00000469528 CDHR2Q9BYE9 1310 aa16.52■□□□□ 0.24
GAPVD1-214ENST00000469528 CHL1O00533 1208 aa16.52■□□□□ 0.24
GAPVD1-214ENST00000469528 HOXB7P09629 217 aa16.52■□□□□ 0.24
GAPVD1-214ENST00000469528 HCLS1P14317 486 aaPredicted RBP16.52■□□□□ 0.24
GAPVD1-214ENST00000469528 MAP2K2P36507 400 aa16.52■□□□□ 0.24
GAPVD1-214ENST00000469528 KIAA2012Q0VF49 1180 aa16.52■□□□□ 0.24
GAPVD1-214ENST00000469528 GRAPQ13588 217 aa16.52■□□□□ 0.24
GAPVD1-214ENST00000469528 WDR43Q15061 677 aaKnown RBP eCLIP16.52■□□□□ 0.24
GAPVD1-214ENST00000469528 ANKRD13DQ6ZTN6 518 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms