RNA–Protein interactions for RNA: ENST00000469366.1

MACF1-212, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-212ENST00000469366 PLBD2Q8NHP8 589 aa15.24■□□□□ 0.03
MACF1-212ENST00000469366 PHAXQ9H814 394 aaKnown RBP15.24■□□□□ 0.03
MACF1-212ENST00000469366 GPBP1L1Q9HC44 474 aaPredicted RBP15.24■□□□□ 0.03
MACF1-212ENST00000469366 RNF181Q9P0P0 153 aa15.24■□□□□ 0.03
MACF1-212ENST00000469366 SLC10A5Q5PT55 438 aa15.23■□□□□ 0.03
MACF1-212ENST00000469366 PPP1R42Q7Z4L9 355 aa15.23■□□□□ 0.03
MACF1-212ENST00000469366 SYNE4Q8N205 404 aa15.23■□□□□ 0.03
MACF1-212ENST00000469366 LMNB1P20700 586 aa15.22■□□□□ 0.03
MACF1-212ENST00000469366 HSP90AB3PQ58FF7 597 aa15.22■□□□□ 0.03
MACF1-212ENST00000469366 OLFM4Q6UX06 510 aa15.22■□□□□ 0.03
MACF1-212ENST00000469366 WDR63Q8IWG1 891 aa15.22■□□□□ 0.03
MACF1-212ENST00000469366 ISCA1Q9BUE6 129 aa15.22■□□□□ 0.03
MACF1-212ENST00000469366 UTP14AQ9BVJ6 771 aaKnown RBP15.22■□□□□ 0.03
MACF1-212ENST00000469366 SPINK5Q9NQ38 1064 aaPredicted RBP15.22■□□□□ 0.03
MACF1-212ENST00000469366 HOXA10P31260 410 aaPredicted RBP15.21■□□□□ 0.03
MACF1-212ENST00000469366 C1QTNF8P60827 252 aa15.21■□□□□ 0.03
MACF1-212ENST00000469366 ZNF428Q96B54 188 aa15.21■□□□□ 0.03
MACF1-212ENST00000469366 CEP350Q5VT06 3117 aa15.21■□□□□ 0.02
MACF1-212ENST00000469366 DICER1Q9UPY3 1922 aaKnown RBP15.2■□□□□ 0.02
MACF1-212ENST00000469366 KIF3CO14782 793 aa15.2■□□□□ 0.02
MACF1-212ENST00000469366 ALDH1B1P30837 517 aa15.2■□□□□ 0.02
MACF1-212ENST00000469366 CCDC30Q5VVM6 783 aa15.2■□□□□ 0.02
MACF1-212ENST00000469366 LAMB2P55268 1798 aa15.2■□□□□ 0.02
MACF1-212ENST00000469366 LTBP3Q9NS15 1303 aa15.19■□□□□ 0.02
MACF1-212ENST00000469366 FANCIQ9NVI1 1328 aa15.19■□□□□ 0.02
MACF1-212ENST00000469366 ATP5J2-PTCD1G3V325 749 aa15.19■□□□□ 0.02
MACF1-212ENST00000469366 TWISTNBQ3B726 338 aaPredicted RBP15.19■□□□□ 0.02
MACF1-212ENST00000469366 SLC51AQ86UW1 340 aa15.19■□□□□ 0.02
MACF1-212ENST00000469366 TRMT112Q9UI30 125 aaKnown RBP15.19■□□□□ 0.02
MACF1-212ENST00000469366 RNF123Q5XPI4 1314 aa15.18■□□□□ 0.02
MACF1-212ENST00000469366 SNED1Q8TER0 1413 aa15.18■□□□□ 0.02
MACF1-212ENST00000469366 TCERG1O14776 1098 aaKnown RBP15.18■□□□□ 0.02
MACF1-212ENST00000469366 HCLS1P14317 486 aaPredicted RBP15.18■□□□□ 0.02
MACF1-212ENST00000469366 TRIM28Q13263 835 aaKnown RBP15.18■□□□□ 0.02
MACF1-212ENST00000469366 NLRP3Q96P20 1036 aa15.18■□□□□ 0.02
MACF1-212ENST00000469366 CRAMP1Q96RY5 1269 aa15.18■□□□□ 0.02
MACF1-212ENST00000469366 NMRK2Q9NPI5 230 aa15.18■□□□□ 0.02
MACF1-212ENST00000469366 ZNF521Q96K83 1311 aa15.17■□□□□ 0.02
MACF1-212ENST00000469366 TIAM2Q8IVF5 1701 aa15.17■□□□□ 0.02
MACF1-212ENST00000469366 CCDC93Q567U6 631 aa15.17■□□□□ 0.02
MACF1-212ENST00000469366 SOGA3Q5TF21 947 aa15.17■□□□□ 0.02
MACF1-212ENST00000469366 RIC3Q7Z5B4 369 aa15.17■□□□□ 0.02
MACF1-212ENST00000469366 RPGRQ92834 1020 aaKnown RBP15.17■□□□□ 0.02
MACF1-212ENST00000469366 TAOK3Q9H2K8 898 aa15.17■□□□□ 0.02
MACF1-212ENST00000469366 DDX60Q8IY21 1712 aaKnown RBP15.17■□□□□ 0.02
MACF1-212ENST00000469366 SH3TC1Q8TE82 1336 aa15.17■□□□□ 0.02
MACF1-212ENST00000469366 VAMP4O75379 141 aa15.16■□□□□ 0.02
MACF1-212ENST00000469366 EXOSC9Q06265 439 aaKnown RBP15.16■□□□□ 0.02
MACF1-212ENST00000469366 GOLGA2Q08379 1002 aa15.16■□□□□ 0.02
MACF1-212ENST00000469366 G2E3Q7L622 706 aa15.16■□□□□ 0.02
MACF1-212ENST00000469366 FAM89AQ96GI7 184 aa15.16■□□□□ 0.02
MACF1-212ENST00000469366 RBM17Q96I25 401 aaKnown RBP15.16■□□□□ 0.02
MACF1-212ENST00000469366 CHMP4AQ9BY43 222 aa15.16■□□□□ 0.02
MACF1-212ENST00000469366 TAF1P21675 1872 aa15.16■□□□□ 0.02
MACF1-212ENST00000469366 ZC3H4Q9UPT8 1303 aaKnown RBP15.16■□□□□ 0.02
MACF1-212ENST00000469366 MYD88Q99836 296 aa15.15■□□□□ 0.02
MACF1-212ENST00000469366 GLTPD2A6NH11 291 aa15.14■□□□□ 0.01
MACF1-212ENST00000469366 SLC4A2P04920 1241 aa15.14■□□□□ 0.01
MACF1-212ENST00000469366 FKBP4Q02790 459 aaKnown RBP eCLIP15.14■□□□□ 0.01
MACF1-212ENST00000469366 RTKN2Q8IZC4 609 aa15.14■□□□□ 0.01
MACF1-212ENST00000469366 METTL22Q9BUU2 404 aaPredicted RBP15.14■□□□□ 0.01
MACF1-212ENST00000469366 ABCC4O15439 1325 aa15.14■□□□□ 0.01
MACF1-212ENST00000469366 PI4KAP2A4QPH2 592 aa15.13■□□□□ 0.01
MACF1-212ENST00000469366 RTL5Q5HYW3 569 aaPredicted RBP15.13■□□□□ 0.01
MACF1-212ENST00000469366 KSR2Q6VAB6 950 aa15.13■□□□□ 0.01
MACF1-212ENST00000469366 PI4KAP1Q8N8J0 262 aa15.13■□□□□ 0.01
MACF1-212ENST00000469366 STK31Q9BXU1 1019 aa15.13■□□□□ 0.01
MACF1-212ENST00000469366 RRAGCQ9HB90 399 aa15.13■□□□□ 0.01
MACF1-212ENST00000469366 ZNF277Q9NRM2 450 aaPredicted RBP15.13■□□□□ 0.01
MACF1-212ENST00000469366 MAP3K2Q9Y2U5 619 aa15.13■□□□□ 0.01
MACF1-212ENST00000469366 KDM2BQ8NHM5 1336 aa15.13■□□□□ 0.01
MACF1-212ENST00000469366 CACNA1FO60840 1977 aa15.13■□□□□ 0.01
MACF1-212ENST00000469366 CCER2I3L3R5 266 aa15.12■□□□□ 0.01
MACF1-212ENST00000469366 PPEF1O14829 653 aaPredicted RBP15.12■□□□□ 0.01
MACF1-212ENST00000469366 DDX58O95786 925 aaKnown RBP15.12■□□□□ 0.01
MACF1-212ENST00000469366 IGKV5-2P06315 115 aa15.12■□□□□ 0.01
MACF1-212ENST00000469366 COL4A1P02462 1669 aa15.12■□□□□ 0.01
MACF1-212ENST00000469366 POTECB2RU33 542 aa15.11■□□□□ 0.01
MACF1-212ENST00000469366 SF3B3Q15393 1217 aaKnown RBP15.11■□□□□ 0.01
MACF1-212ENST00000469366 CC2D2BQ6DHV5 1058 aa15.11■□□□□ 0.01
MACF1-212ENST00000469366 ZBTB38Q8NAP3 1195 aaPredicted RBP15.11■□□□□ 0.01
MACF1-212ENST00000469366 CCDC191Q8NCU4 936 aa15.11■□□□□ 0.01
MACF1-212ENST00000469366 JARID2Q92833 1246 aaPredicted RBP15.11■□□□□ 0.01
MACF1-212ENST00000469366 PSMD1Q99460 953 aa15.11■□□□□ 0.01
MACF1-212ENST00000469366 MYH16Q9H6N6 1097 aa15.11■□□□□ 0.01
MACF1-212ENST00000469366 COL4A5P29400 1685 aa15.1■□□□□ 0.01
MACF1-212ENST00000469366 IRS4O14654 1257 aaPredicted RBP15.1■□□□□ 0.01
MACF1-212ENST00000469366 BBOX1O75936 387 aa15.1■□□□□ 0.01
MACF1-212ENST00000469366 TOMM70O94826 608 aa15.1■□□□□ 0.01
MACF1-212ENST00000469366 PCCAP05165 728 aaPredicted RBP15.1■□□□□ 0.01
MACF1-212ENST00000469366 FLIIQ13045 1269 aa15.1■□□□□ 0.01
MACF1-212ENST00000469366 ATP6V0A2Q9Y487 856 aa15.1■□□□□ 0.01
MACF1-212ENST00000469366 IARSP41252 1262 aaKnown RBP15.09■□□□□ 0.01
MACF1-212ENST00000469366 GRAPQ13588 217 aa15.09■□□□□ 0.01
MACF1-212ENST00000469366 DDX46Q7L014 1031 aaKnown RBP15.09■□□□□ 0.01
MACF1-212ENST00000469366 GRAPLQ8TC17 118 aaPredicted RBP15.09■□□□□ 0.01
MACF1-212ENST00000469366 CWC25Q9NXE8 425 aaPredicted RBP15.09■□□□□ 0.01
MACF1-212ENST00000469366 WDR90Q96KV7 1748 aa15.09■□□□□ 0.01
MACF1-212ENST00000469366 DDNO94850 711 aaPredicted RBP15.08■□□□□ 0
MACF1-212ENST00000469366 CWF19L2Q2TBE0 894 aaKnown RBP15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms