RNA–Protein interactions for RNA: ENST00000469093.1

COL5A1-207, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 670 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-207ENST00000469093 SCN4AP35499 1836 aa16.17■□□□□ 0.18
COL5A1-207ENST00000469093 RNF123Q5XPI4 1314 aa16.17■□□□□ 0.18
COL5A1-207ENST00000469093 CNTNAP1P78357 1384 aa16.16■□□□□ 0.18
COL5A1-207ENST00000469093 TMEM88BA6NKF7 163 aa16.16■□□□□ 0.18
COL5A1-207ENST00000469093 GIGYF2Q6Y7W6 1299 aaKnown RBP16.16■□□□□ 0.18
COL5A1-207ENST00000469093 LRP10Q7Z4F1 713 aa16.16■□□□□ 0.18
COL5A1-207ENST00000469093 CNTROBQ8N137 903 aa16.16■□□□□ 0.18
COL5A1-207ENST00000469093 CRAMP1Q96RY5 1269 aa16.16■□□□□ 0.18
COL5A1-207ENST00000469093 NTSR2O95665 410 aa16.15■□□□□ 0.18
COL5A1-207ENST00000469093 PDIA6Q15084 440 aa16.15■□□□□ 0.18
COL5A1-207ENST00000469093 MAP1SQ66K74 1059 aaPredicted RBP16.15■□□□□ 0.18
COL5A1-207ENST00000469093 C3orf67Q6ZVT6 689 aa16.15■□□□□ 0.18
COL5A1-207ENST00000469093 RBM17Q96I25 401 aaKnown RBP16.15■□□□□ 0.18
COL5A1-207ENST00000469093 ERBB4Q15303 1308 aa16.15■□□□□ 0.18
COL5A1-207ENST00000469093 MAPK8IP3Q9UPT6 1336 aa16.15■□□□□ 0.18
COL5A1-207ENST00000469093 IBTKQ9P2D0 1353 aaPredicted RBP16.14■□□□□ 0.17
COL5A1-207ENST00000469093 TCERG1O14776 1098 aaKnown RBP16.14■□□□□ 0.17
COL5A1-207ENST00000469093 EIF2S2P20042 333 aaKnown RBP16.14■□□□□ 0.17
COL5A1-207ENST00000469093 VEGFBP49765 207 aa16.14■□□□□ 0.17
COL5A1-207ENST00000469093 EIF6P56537 245 aaKnown RBP16.14■□□□□ 0.17
COL5A1-207ENST00000469093 RIPK4P57078 832 aa16.14■□□□□ 0.17
COL5A1-207ENST00000469093 GRIPAP1Q4V328 841 aa16.14■□□□□ 0.17
COL5A1-207ENST00000469093 SLC51AQ86UW1 340 aa16.14■□□□□ 0.17
COL5A1-207ENST00000469093 TSPYL4Q9UJ04 414 aa16.14■□□□□ 0.17
COL5A1-207ENST00000469093 DLG5Q8TDM6 1919 aa16.13■□□□□ 0.17
COL5A1-207ENST00000469093 KDM3BQ7LBC6 1761 aa16.13■□□□□ 0.17
COL5A1-207ENST00000469093 NUP98P52948 1817 aa16.13■□□□□ 0.17
COL5A1-207ENST00000469093 FOXN1O15353 648 aa16.13■□□□□ 0.17
COL5A1-207ENST00000469093 SLC10A5Q5PT55 438 aa16.13■□□□□ 0.17
COL5A1-207ENST00000469093 PPP1R42Q7Z4L9 355 aa16.13■□□□□ 0.17
COL5A1-207ENST00000469093 LARGE2Q8N3Y3 721 aa16.13■□□□□ 0.17
COL5A1-207ENST00000469093 GJA3Q9Y6H8 435 aa16.13■□□□□ 0.17
COL5A1-207ENST00000469093 RIC1Q4ADV7 1423 aa16.12■□□□□ 0.17
COL5A1-207ENST00000469093 PPEF1O14829 653 aaPredicted RBP16.12■□□□□ 0.17
COL5A1-207ENST00000469093 PROSER3Q2NL68 480 aa16.12■□□□□ 0.17
COL5A1-207ENST00000469093 PARP10Q53GL7 1025 aa16.12■□□□□ 0.17
COL5A1-207ENST00000469093 NLRP3Q96P20 1036 aa16.12■□□□□ 0.17
COL5A1-207ENST00000469093 UTP14AQ9BVJ6 771 aaKnown RBP16.12■□□□□ 0.17
COL5A1-207ENST00000469093 LAMB4A4D0S4 1761 aa16.12■□□□□ 0.17
COL5A1-207ENST00000469093 ANXA1P04083 346 aa16.11■□□□□ 0.17
COL5A1-207ENST00000469093 EPS15P42566 896 aa16.11■□□□□ 0.17
COL5A1-207ENST00000469093 SCNN1DP51172 638 aa16.11■□□□□ 0.17
COL5A1-207ENST00000469093 BABAM1Q9NWV8 329 aa16.11■□□□□ 0.17
COL5A1-207ENST00000469093 COL4A5P29400 1685 aa16.11■□□□□ 0.17
COL5A1-207ENST00000469093 TMPOP42166 694 aaKnown RBP16.1■□□□□ 0.17
COL5A1-207ENST00000469093 DEFB115Q30KQ5 88 aa16.1■□□□□ 0.17
COL5A1-207ENST00000469093 WBP1LQ9NX94 342 aa16.1■□□□□ 0.17
COL5A1-207ENST00000469093 ATP6V0A2Q9Y487 856 aa16.1■□□□□ 0.17
COL5A1-207ENST00000469093 ADAMTSL1Q8N6G6 1762 aa16.09■□□□□ 0.17
COL5A1-207ENST00000469093 RASSF10A6NK89 507 aa16.09■□□□□ 0.17
COL5A1-207ENST00000469093 LMOD1P29536 600 aaPredicted RBP16.09■□□□□ 0.17
COL5A1-207ENST00000469093 COPS6Q7L5N1 327 aa16.09■□□□□ 0.17
COL5A1-207ENST00000469093 PRDM10Q9NQV6 1147 aa16.09■□□□□ 0.17
COL5A1-207ENST00000469093 DDX21Q9NR30 783 aaKnown RBP eCLIP16.09■□□□□ 0.17
COL5A1-207ENST00000469093 PPIP5K2O43314 1243 aa16.08■□□□□ 0.16
COL5A1-207ENST00000469093 RALBP1Q15311 655 aa16.08■□□□□ 0.16
COL5A1-207ENST00000469093 NIM1KQ8IY84 436 aa16.08■□□□□ 0.16
COL5A1-207ENST00000469093 NECTIN2Q92692 538 aa16.08■□□□□ 0.16
COL5A1-207ENST00000469093 TMX4Q9H1E5 349 aaPredicted RBP16.08■□□□□ 0.16
COL5A1-207ENST00000469093 VPS33BQ9H267 617 aa16.08■□□□□ 0.16
COL5A1-207ENST00000469093 BBOX1O75936 387 aa16.07■□□□□ 0.16
COL5A1-207ENST00000469093 CTCFP49711 727 aaPredicted RBP16.07■□□□□ 0.16
COL5A1-207ENST00000469093 FMR1Q06787 632 aaKnown RBP eCLIP16.07■□□□□ 0.16
COL5A1-207ENST00000469093 AIMP1Q12904 312 aaKnown RBP16.07■□□□□ 0.16
COL5A1-207ENST00000469093 AOC3Q16853 763 aa16.07■□□□□ 0.16
COL5A1-207ENST00000469093 USP50Q70EL3 339 aaPredicted RBP16.07■□□□□ 0.16
COL5A1-207ENST00000469093 NLRP10Q86W26 655 aa16.07■□□□□ 0.16
COL5A1-207ENST00000469093 XAGE3Q8WTP9 111 aa16.07■□□□□ 0.16
COL5A1-207ENST00000469093 AIDAQ96BJ3 306 aa16.07■□□□□ 0.16
COL5A1-207ENST00000469093 RTFDC1Q9BY42 306 aaPredicted RBP16.07■□□□□ 0.16
COL5A1-207ENST00000469093 ABCC4O15439 1325 aa16.07■□□□□ 0.16
COL5A1-207ENST00000469093 HCLS1P14317 486 aaPredicted RBP16.06■□□□□ 0.16
COL5A1-207ENST00000469093 CXCL9Q07325 125 aa16.06■□□□□ 0.16
COL5A1-207ENST00000469093 LMOD3Q0VAK6 560 aa16.06■□□□□ 0.16
COL5A1-207ENST00000469093 TCIRG1Q13488 830 aa16.06■□□□□ 0.16
COL5A1-207ENST00000469093 HSP90AB3PQ58FF7 597 aa16.06■□□□□ 0.16
COL5A1-207ENST00000469093 SP8Q8IXZ3 490 aa16.06■□□□□ 0.16
COL5A1-207ENST00000469093 ZNRF3Q9ULT6 936 aa16.06■□□□□ 0.16
COL5A1-207ENST00000469093 ABT1Q9ULW3 272 aaKnown RBP16.06■□□□□ 0.16
COL5A1-207ENST00000469093 WDR33Q9C0J8 1336 aaKnown RBP16.05■□□□□ 0.16
COL5A1-207ENST00000469093 CHL1O00533 1208 aa16.05■□□□□ 0.16
COL5A1-207ENST00000469093 LBX1P52954 281 aa16.05■□□□□ 0.16
COL5A1-207ENST00000469093 NEUROD2Q15784 382 aa16.05■□□□□ 0.16
COL5A1-207ENST00000469093 KRT24Q2M2I5 525 aa16.05■□□□□ 0.16
COL5A1-207ENST00000469093 TRAF5O00463 557 aa16.04■□□□□ 0.16
COL5A1-207ENST00000469093 CST9Q5W186 159 aa16.04■□□□□ 0.16
COL5A1-207ENST00000469093 MPNDQ8N594 471 aa16.04■□□□□ 0.16
COL5A1-207ENST00000469093 SUPT20HQ8NEM7 779 aa16.04■□□□□ 0.16
COL5A1-207ENST00000469093 GPRC5DQ9NZD1 345 aa16.04■□□□□ 0.16
COL5A1-207ENST00000469093 TRMT112Q9UI30 125 aaKnown RBP16.04■□□□□ 0.16
COL5A1-207ENST00000469093 LTBP1Q14766 1721 aa16.04■□□□□ 0.16
COL5A1-207ENST00000469093 MAP2K1Q02750 393 aaPredicted RBP16.03■□□□□ 0.16
COL5A1-207ENST00000469093 DPP8Q6V1X1 898 aaPredicted RBP16.03■□□□□ 0.16
COL5A1-207ENST00000469093 CCDC146Q8IYE0 955 aa16.03■□□□□ 0.16
COL5A1-207ENST00000469093 ADARB2Q9NS39 739 aaKnown RBP16.03■□□□□ 0.16
COL5A1-207ENST00000469093 TRIM35Q9UPQ4 493 aa16.03■□□□□ 0.16
COL5A1-207ENST00000469093 SH3TC1Q8TE82 1336 aa16.02■□□□□ 0.16
COL5A1-207ENST00000469093 KIAA2012Q0VF49 1180 aa16.02■□□□□ 0.16
COL5A1-207ENST00000469093 DDX46Q7L014 1031 aaKnown RBP16.02■□□□□ 0.16
COL5A1-207ENST00000469093 HSPA8P11142 646 aaKnown RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms