RNA–Protein interactions for RNA: ENST00000467553.2

CCHCR1-211, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 589 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-211ENST00000467553 PSMD1Q99460 953 aa18.28■□□□□ 0.52
CCHCR1-211ENST00000467553 NECTIN2Q92692 538 aa18.27■□□□□ 0.52
CCHCR1-211ENST00000467553 SALL2Q9Y467 1007 aaPredicted RBP18.27■□□□□ 0.52
CCHCR1-211ENST00000467553 RNF123Q5XPI4 1314 aa18.26■□□□□ 0.51
CCHCR1-211ENST00000467553 PCNTO95613 3336 aa18.26■□□□□ 0.51
CCHCR1-211ENST00000467553 DDNO94850 711 aaPredicted RBP18.26■□□□□ 0.51
CCHCR1-211ENST00000467553 CALD1Q05682 793 aaKnown RBP18.26■□□□□ 0.51
CCHCR1-211ENST00000467553 KRT24Q2M2I5 525 aa18.26■□□□□ 0.51
CCHCR1-211ENST00000467553 CHADLQ6NUI6 762 aa18.26■□□□□ 0.51
CCHCR1-211ENST00000467553 RPGRQ92834 1020 aaKnown RBP18.26■□□□□ 0.51
CCHCR1-211ENST00000467553 CRAMP1Q96RY5 1269 aa18.26■□□□□ 0.51
CCHCR1-211ENST00000467553 GNAI1P63096 354 aa18.25■□□□□ 0.51
CCHCR1-211ENST00000467553 HSP90AB3PQ58FF7 597 aa18.25■□□□□ 0.51
CCHCR1-211ENST00000467553 RBM17Q96I25 401 aaKnown RBP18.25■□□□□ 0.51
CCHCR1-211ENST00000467553 ZBTB3Q9H5J0 574 aa18.25■□□□□ 0.51
CCHCR1-211ENST00000467553 IARSP41252 1262 aaKnown RBP18.24■□□□□ 0.51
CCHCR1-211ENST00000467553 SUSD4Q5VX71 490 aa18.24■□□□□ 0.51
CCHCR1-211ENST00000467553 LRP10Q7Z4F1 713 aa18.24■□□□□ 0.51
CCHCR1-211ENST00000467553 NUTM1Q86Y26 1132 aa18.24■□□□□ 0.51
CCHCR1-211ENST00000467553 SYNE4Q8N205 404 aa18.24■□□□□ 0.51
CCHCR1-211ENST00000467553 MBIPQ9NS73 344 aa18.24■□□□□ 0.51
CCHCR1-211ENST00000467553 IFT57Q9NWB7 429 aa18.24■□□□□ 0.51
CCHCR1-211ENST00000467553 UBN2Q6ZU65 1347 aa18.23■□□□□ 0.51
CCHCR1-211ENST00000467553 ABCC12Q96J65 1359 aa18.23■□□□□ 0.51
CCHCR1-211ENST00000467553 FZD9O00144 591 aa18.23■□□□□ 0.51
CCHCR1-211ENST00000467553 NTSR2O95665 410 aa18.23■□□□□ 0.51
CCHCR1-211ENST00000467553 ZNF853P0CG23 659 aa18.23■□□□□ 0.51
CCHCR1-211ENST00000467553 HTRA3P83110 453 aa18.23■□□□□ 0.51
CCHCR1-211ENST00000467553 PDIA6Q15084 440 aa18.23■□□□□ 0.51
CCHCR1-211ENST00000467553 SLC10A5Q5PT55 438 aa18.23■□□□□ 0.51
CCHCR1-211ENST00000467553 LDHDQ86WU2 507 aa18.23■□□□□ 0.51
CCHCR1-211ENST00000467553 JDP2Q8WYK2 163 aa18.23■□□□□ 0.51
CCHCR1-211ENST00000467553 NLRP3Q96P20 1036 aa18.23■□□□□ 0.51
CCHCR1-211ENST00000467553 TMX4Q9H1E5 349 aaPredicted RBP18.23■□□□□ 0.51
CCHCR1-211ENST00000467553 ZNF277Q9NRM2 450 aaPredicted RBP18.23■□□□□ 0.51
CCHCR1-211ENST00000467553 ANXA1P04083 346 aa18.22■□□□□ 0.51
CCHCR1-211ENST00000467553 HOXB7P09629 217 aa18.22■□□□□ 0.51
CCHCR1-211ENST00000467553 GPTP24298 496 aa18.22■□□□□ 0.51
CCHCR1-211ENST00000467553 WWC1Q8IX03 1113 aa18.22■□□□□ 0.51
CCHCR1-211ENST00000467553 UTP14AQ9BVJ6 771 aaKnown RBP18.22■□□□□ 0.51
CCHCR1-211ENST00000467553 VPS33BQ9H267 617 aa18.22■□□□□ 0.51
CCHCR1-211ENST00000467553 CREBZFQ9NS37 354 aa18.22■□□□□ 0.51
CCHCR1-211ENST00000467553 SNED1Q8TER0 1413 aa18.22■□□□□ 0.51
CCHCR1-211ENST00000467553 ELL2O00472 640 aaPredicted RBP18.21■□□□□ 0.51
CCHCR1-211ENST00000467553 CCDC27Q2M243 656 aa18.21■□□□□ 0.51
CCHCR1-211ENST00000467553 PNMA8AQ86V59 439 aaPredicted RBP18.21■□□□□ 0.51
CCHCR1-211ENST00000467553 GPC2Q8N158 579 aa18.21■□□□□ 0.51
CCHCR1-211ENST00000467553 TAF1DQ9H5J8 278 aaPredicted RBP18.21■□□□□ 0.51
CCHCR1-211ENST00000467553 DUSP27Q5VZP5 1158 aa18.2■□□□□ 0.5
CCHCR1-211ENST00000467553 DDX21Q9NR30 783 aaKnown RBP eCLIP18.2■□□□□ 0.5
CCHCR1-211ENST00000467553 HACL1Q9UJ83 578 aa18.2■□□□□ 0.5
CCHCR1-211ENST00000467553 AIMP1Q12904 312 aaKnown RBP18.19■□□□□ 0.5
CCHCR1-211ENST00000467553 PROSER3Q2NL68 480 aa18.19■□□□□ 0.5
CCHCR1-211ENST00000467553 HDGFL1Q5TGJ6 251 aa18.19■□□□□ 0.5
CCHCR1-211ENST00000467553 ANKRD36CQ5JPF3 1778 aa18.19■□□□□ 0.5
CCHCR1-211ENST00000467553 PPEF1O14829 653 aaPredicted RBP18.18■□□□□ 0.5
CCHCR1-211ENST00000467553 EIF6P56537 245 aaKnown RBP18.18■□□□□ 0.5
CCHCR1-211ENST00000467553 OLFM4Q6UX06 510 aa18.18■□□□□ 0.5
CCHCR1-211ENST00000467553 COPS6Q7L5N1 327 aa18.18■□□□□ 0.5
CCHCR1-211ENST00000467553 BBOX1O75936 387 aa18.17■□□□□ 0.5
CCHCR1-211ENST00000467553 TCIRG1Q13488 830 aa18.17■□□□□ 0.5
CCHCR1-211ENST00000467553 NCBP3Q53F19 620 aaKnown RBP18.17■□□□□ 0.5
CCHCR1-211ENST00000467553 TSR2Q969E8 191 aaKnown RBP18.17■□□□□ 0.5
CCHCR1-211ENST00000467553 ZNF541Q9H0D2 1346 aa18.17■□□□□ 0.5
CCHCR1-211ENST00000467553 EPHX2P34913 555 aa18.16■□□□□ 0.5
CCHCR1-211ENST00000467553 C8orf58Q8NAV2 365 aa18.16■□□□□ 0.5
CCHCR1-211ENST00000467553 SUPT20HQ8NEM7 779 aa18.16■□□□□ 0.5
CCHCR1-211ENST00000467553 CHPF2Q9P2E5 772 aa18.16■□□□□ 0.5
CCHCR1-211ENST00000467553 ATP6V0A2Q9Y487 856 aa18.16■□□□□ 0.5
CCHCR1-211ENST00000467553 PASKQ96RG2 1323 aa18.16■□□□□ 0.5
CCHCR1-211ENST00000467553 TMC4Q7Z404 712 aa18.15■□□□□ 0.5
CCHCR1-211ENST00000467553 NLRP10Q86W26 655 aa18.15■□□□□ 0.5
CCHCR1-211ENST00000467553 LARGE2Q8N3Y3 721 aa18.15■□□□□ 0.5
CCHCR1-211ENST00000467553 XAGE3Q8WTP9 111 aa18.15■□□□□ 0.5
CCHCR1-211ENST00000467553 CHMP4AQ9BY43 222 aa18.15■□□□□ 0.5
CCHCR1-211ENST00000467553 DBF4Q9UBU7 674 aaPredicted RBP18.15■□□□□ 0.5
CCHCR1-211ENST00000467553 POTEIP0CG38 1075 aa18.14■□□□□ 0.49
CCHCR1-211ENST00000467553 POTEJP0CG39 1038 aa18.14■□□□□ 0.49
CCHCR1-211ENST00000467553 DIEXFQ68CQ4 756 aaKnown RBP18.14■□□□□ 0.49
CCHCR1-211ENST00000467553 ADAMTSL1Q8N6G6 1762 aa18.13■□□□□ 0.49
CCHCR1-211ENST00000467553 LMOD1P29536 600 aaPredicted RBP18.13■□□□□ 0.49
CCHCR1-211ENST00000467553 EAPPQ56P03 285 aaPredicted RBP18.13■□□□□ 0.49
CCHCR1-211ENST00000467553 DDX46Q7L014 1031 aaKnown RBP18.13■□□□□ 0.49
CCHCR1-211ENST00000467553 WDR63Q8IWG1 891 aa18.13■□□□□ 0.49
CCHCR1-211ENST00000467553 SP8Q8IXZ3 490 aa18.13■□□□□ 0.49
CCHCR1-211ENST00000467553 PLBD2Q8NHP8 589 aa18.13■□□□□ 0.49
CCHCR1-211ENST00000467553 RTFDC1Q9BY42 306 aaPredicted RBP18.13■□□□□ 0.49
CCHCR1-211ENST00000467553 HYPKQ9NX55 129 aa18.13■□□□□ 0.49
CCHCR1-211ENST00000467553 TRMT112Q9UI30 125 aaKnown RBP18.13■□□□□ 0.49
CCHCR1-211ENST00000467553 CLEC11AQ9Y240 323 aa18.13■□□□□ 0.49
CCHCR1-211ENST00000467553 IL16Q14005 1332 aa18.13■□□□□ 0.49
CCHCR1-211ENST00000467553 SH3TC1Q8TE82 1336 aa18.13■□□□□ 0.49
CCHCR1-211ENST00000467553 TMEM88BA6NKF7 163 aa18.12■□□□□ 0.49
CCHCR1-211ENST00000467553 CCER2I3L3R5 266 aa18.12■□□□□ 0.49
CCHCR1-211ENST00000467553 ITGBL1O95965 494 aaPredicted RBP18.12■□□□□ 0.49
CCHCR1-211ENST00000467553 ANKRD13DQ6ZTN6 518 aa18.12■□□□□ 0.49
CCHCR1-211ENST00000467553 NIM1KQ8IY84 436 aa18.12■□□□□ 0.49
CCHCR1-211ENST00000467553 TSPYL6Q8N831 410 aa18.12■□□□□ 0.49
CCHCR1-211ENST00000467553 ABCC4O15439 1325 aa18.12■□□□□ 0.49
CCHCR1-211ENST00000467553 C3orf67Q6ZVT6 689 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms