RNA–Protein interactions for RNA: ENST00000467371.1

SPTBN1-204, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTBN1, Length 3,332 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-204ENST00000467371 UBE2Q1Q7Z7E8 422 aa9.19□□□□□ -0.94
SPTBN1-204ENST00000467371 PRR7Q8TB68 274 aa9.19□□□□□ -0.94
SPTBN1-204ENST00000467371 CD248Q9HCU0 757 aa9.19□□□□□ -0.94
SPTBN1-204ENST00000467371 A0A1W2PRQ8 180 aa9.19□□□□□ -0.94
SPTBN1-204ENST00000467371 HSP90AB1P08238 724 aaKnown RBP9.19□□□□□ -0.94
SPTBN1-204ENST00000467371 DMTNQ08495 405 aa9.19□□□□□ -0.94
SPTBN1-204ENST00000467371 TAF11Q15544 211 aa9.19□□□□□ -0.94
SPTBN1-204ENST00000467371 EXOC6Q8TAG9 804 aa9.19□□□□□ -0.94
SPTBN1-204ENST00000467371 RNF34Q969K3 372 aa9.19□□□□□ -0.94
SPTBN1-204ENST00000467371 GOLGA6L3A6NEY3 463 aa9.18□□□□□ -0.94
SPTBN1-204ENST00000467371 MYL1P05976 194 aa9.18□□□□□ -0.94
SPTBN1-204ENST00000467371 HNRNPMP52272 730 aaKnown RBP eCLIP9.18□□□□□ -0.94
SPTBN1-204ENST00000467371 SEC13P55735 322 aa9.18□□□□□ -0.94
SPTBN1-204ENST00000467371 TBC1D9Q6ZT07 1266 aa9.18□□□□□ -0.94
SPTBN1-204ENST00000467371 ZNF132P52740 706 aa9.18□□□□□ -0.94
SPTBN1-204ENST00000467371 RIPK4P57078 832 aa9.18□□□□□ -0.94
SPTBN1-204ENST00000467371 VAC14Q08AM6 782 aa9.18□□□□□ -0.94
SPTBN1-204ENST00000467371 BRD3Q15059 726 aa9.18□□□□□ -0.94
SPTBN1-204ENST00000467371 Q3C1V9 767 aa9.18□□□□□ -0.94
SPTBN1-204ENST00000467371 PGBD3Q8N328 593 aa9.18□□□□□ -0.94
SPTBN1-204ENST00000467371 FAM212AQ96EL1 285 aa9.18□□□□□ -0.94
SPTBN1-204ENST00000467371 PPCSQ9HAB8 311 aa9.18□□□□□ -0.94
SPTBN1-204ENST00000467371 TMCC3Q9ULS5 477 aa9.18□□□□□ -0.94
SPTBN1-204ENST00000467371 NOVA2Q9UNW9 492 aaKnown RBP9.18□□□□□ -0.94
SPTBN1-204ENST00000467371 CFAP43Q8NDM7 1665 aa9.18□□□□□ -0.94
SPTBN1-204ENST00000467371 SLC26A4O43511 780 aa9.18□□□□□ -0.94
SPTBN1-204ENST00000467371 LMNB1P20700 586 aa9.18□□□□□ -0.94
SPTBN1-204ENST00000467371 C16orf54Q6UWD8 224 aa9.18□□□□□ -0.94
SPTBN1-204ENST00000467371 L3MBTL3Q96JM7 780 aaPredicted RBP9.18□□□□□ -0.94
SPTBN1-204ENST00000467371 PHOX2BQ99453 314 aa9.18□□□□□ -0.94
SPTBN1-204ENST00000467371 TMX1Q9H3N1 280 aa9.18□□□□□ -0.94
SPTBN1-204ENST00000467371 KMT5AQ9NQR1 393 aa9.18□□□□□ -0.94
SPTBN1-204ENST00000467371 LIMD1Q9UGP4 676 aa9.18□□□□□ -0.94
SPTBN1-204ENST00000467371 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.18□□□□□ -0.94
SPTBN1-204ENST00000467371 MYOM3Q5VTT5 1437 aa9.17□□□□□ -0.94
SPTBN1-204ENST00000467371 PRRT4C9JH25 899 aa9.17□□□□□ -0.94
SPTBN1-204ENST00000467371 HOXC13P31276 330 aa9.17□□□□□ -0.94
SPTBN1-204ENST00000467371 GNL2Q13823 731 aaKnown RBP9.17□□□□□ -0.94
SPTBN1-204ENST00000467371 FMNL2Q96PY5 1086 aa9.17□□□□□ -0.94
SPTBN1-204ENST00000467371 C22orf23Q9BZE7 217 aa9.17□□□□□ -0.94
SPTBN1-204ENST00000467371 PDGFDQ9GZP0 370 aaPredicted RBP9.17□□□□□ -0.94
SPTBN1-204ENST00000467371 HOMER2Q9NSB8 354 aa9.17□□□□□ -0.94
SPTBN1-204ENST00000467371 IPO5O00410 1097 aaKnown RBP9.17□□□□□ -0.94
SPTBN1-204ENST00000467371 DPYSL4O14531 572 aa9.17□□□□□ -0.94
SPTBN1-204ENST00000467371 FAM160A1Q05DH4 1040 aa9.17□□□□□ -0.94
SPTBN1-204ENST00000467371 DCTN1Q14203 1278 aa9.17□□□□□ -0.94
SPTBN1-204ENST00000467371 NBPF8Q3BBV2 869 aa9.17□□□□□ -0.94
SPTBN1-204ENST00000467371 TMEM87BQ96K49 555 aa9.17□□□□□ -0.94
SPTBN1-204ENST00000467371 FAM210AQ96ND0 272 aa9.17□□□□□ -0.94
SPTBN1-204ENST00000467371 PGAP2Q9UHJ9 254 aa9.17□□□□□ -0.94
SPTBN1-204ENST00000467371 FYCO1Q9BQS8 1478 aa9.17□□□□□ -0.94
SPTBN1-204ENST00000467371 MYL3P08590 195 aa9.16□□□□□ -0.94
SPTBN1-204ENST00000467371 CASQ1P31415 396 aa9.16□□□□□ -0.94
SPTBN1-204ENST00000467371 TAF3Q5VWG9 929 aa9.16□□□□□ -0.94
SPTBN1-204ENST00000467371 PANK2Q9BZ23 570 aa9.16□□□□□ -0.94
SPTBN1-204ENST00000467371 HDAC9Q9UKV0 1011 aa9.16□□□□□ -0.94
SPTBN1-204ENST00000467371 E2F5Q15329 346 aa9.16□□□□□ -0.94
SPTBN1-204ENST00000467371 C8orf34Q49A92 452 aa9.16□□□□□ -0.94
SPTBN1-204ENST00000467371 PLPP6Q8IY26 295 aa9.16□□□□□ -0.94
SPTBN1-204ENST00000467371 ACRBPQ8NEB7 543 aa9.16□□□□□ -0.94
SPTBN1-204ENST00000467371 E2F7Q96AV8 911 aa9.16□□□□□ -0.94
SPTBN1-204ENST00000467371 JPH4Q96JJ6 628 aa9.16□□□□□ -0.94
SPTBN1-204ENST00000467371 SLX1AQ9BQ83 275 aa9.16□□□□□ -0.94
SPTBN1-204ENST00000467371 CCDC7Q96M83 1385 aa9.16□□□□□ -0.94
SPTBN1-204ENST00000467371 PYGBP11216 843 aa9.16□□□□□ -0.94
SPTBN1-204ENST00000467371 MAPK1P28482 360 aa9.16□□□□□ -0.94
SPTBN1-204ENST00000467371 MRE11P49959 708 aa9.16□□□□□ -0.94
SPTBN1-204ENST00000467371 SEPT2Q15019 361 aa9.16□□□□□ -0.94
SPTBN1-204ENST00000467371 BRDTQ58F21 947 aaPredicted RBP9.16□□□□□ -0.94
SPTBN1-204ENST00000467371 PDXDC2PQ6P474 469 aa9.16□□□□□ -0.94
SPTBN1-204ENST00000467371 MTERF4Q7Z6M4 381 aaKnown RBP9.16□□□□□ -0.94
SPTBN1-204ENST00000467371 HELQQ8TDG4 1101 aa9.16□□□□□ -0.94
SPTBN1-204ENST00000467371 NELL1Q92832 810 aa9.16□□□□□ -0.94
SPTBN1-204ENST00000467371 PARP2Q9UGN5 583 aa9.16□□□□□ -0.94
SPTBN1-204ENST00000467371 ZNF652Q9Y2D9 606 aa9.16□□□□□ -0.94
SPTBN1-204ENST00000467371 NAIPQ13075 1403 aa9.15□□□□□ -0.94
SPTBN1-204ENST00000467371 CDKN1CP49918 316 aaPredicted RBP9.15□□□□□ -0.94
SPTBN1-204ENST00000467371 SLC20A2Q08357 652 aa9.15□□□□□ -0.94
SPTBN1-204ENST00000467371 CLP1Q92989 425 aaKnown RBP9.15□□□□□ -0.94
SPTBN1-204ENST00000467371 STK26Q9P289 416 aa9.15□□□□□ -0.94
SPTBN1-204ENST00000467371 TAGLN3Q9UI15 199 aa9.15□□□□□ -0.94
SPTBN1-204ENST00000467371 NR1I2O75469 434 aa9.15□□□□□ -0.94
SPTBN1-204ENST00000467371 FCHSD2O94868 740 aa9.15□□□□□ -0.94
SPTBN1-204ENST00000467371 PPP2R5AQ15172 486 aa9.15□□□□□ -0.94
SPTBN1-204ENST00000467371 LRRC41Q15345 812 aa9.15□□□□□ -0.94
SPTBN1-204ENST00000467371 GRAMD1BQ3KR37 738 aa9.15□□□□□ -0.94
SPTBN1-204ENST00000467371 KIAA1211Q6ZU35 1233 aa9.15□□□□□ -0.94
SPTBN1-204ENST00000467371 TBC1D20Q96BZ9 403 aa9.15□□□□□ -0.94
SPTBN1-204ENST00000467371 IP6K2Q9UHH9 426 aa9.15□□□□□ -0.94
SPTBN1-204ENST00000467371 GRXCR2A6NFK2 248 aa9.15□□□□□ -0.95
SPTBN1-204ENST00000467371 P4HBP07237 508 aaKnown RBP9.15□□□□□ -0.95
SPTBN1-204ENST00000467371 FOSL1P15407 271 aa9.15□□□□□ -0.95
SPTBN1-204ENST00000467371 AKT1S1Q96B36 256 aa9.15□□□□□ -0.95
SPTBN1-204ENST00000467371 NGRNQ9NPE2 291 aaKnown RBP9.15□□□□□ -0.95
SPTBN1-204ENST00000467371 PRG4Q92954 1404 aaPredicted RBP9.14□□□□□ -0.95
SPTBN1-204ENST00000467371 PIK3CAP42336 1068 aa9.14□□□□□ -0.95
SPTBN1-204ENST00000467371 TRPC1P48995 793 aa9.14□□□□□ -0.95
SPTBN1-204ENST00000467371 EMILIN3Q9NT22 766 aa9.14□□□□□ -0.95
SPTBN1-204ENST00000467371 KDM2BQ8NHM5 1336 aa9.14□□□□□ -0.95
SPTBN1-204ENST00000467371 MORC3Q14149 939 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms