RNA–Protein interactions for RNA: ENST00000467065.1

UBXN4-205, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 334 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-205ENST00000467065 NPHP1O15259 732 aa8.57□□□□□ -1.04
UBXN4-205ENST00000467065 SEC24BO95487 1268 aa8.57□□□□□ -1.04
UBXN4-205ENST00000467065 TMPOP42166 694 aaKnown RBP8.57□□□□□ -1.04
UBXN4-205ENST00000467065 EIF4A1P60842 406 aaKnown RBP8.57□□□□□ -1.04
UBXN4-205ENST00000467065 HNRNPUQ00839 825 aaKnown RBP eCLIP8.57□□□□□ -1.04
UBXN4-205ENST00000467065 RASSF7Q02833 373 aa8.57□□□□□ -1.04
UBXN4-205ENST00000467065 CNBD1Q8NA66 436 aa8.57□□□□□ -1.04
UBXN4-205ENST00000467065 SETDB2Q96T68 719 aa8.57□□□□□ -1.04
UBXN4-205ENST00000467065 SENP3-EIF4A1A0A087X0R7 540 aa8.56□□□□□ -1.04
UBXN4-205ENST00000467065 H0YIN7 160 aa8.56□□□□□ -1.04
UBXN4-205ENST00000467065 C9orf131Q5VYM1 1079 aa8.56□□□□□ -1.04
UBXN4-205ENST00000467065 YTHDC1Q96MU7 727 aaKnown RBP8.56□□□□□ -1.04
UBXN4-205ENST00000467065 RNF181Q9P0P0 153 aa8.56□□□□□ -1.04
UBXN4-205ENST00000467065 TSPYL4Q9UJ04 414 aa8.56□□□□□ -1.04
UBXN4-205ENST00000467065 ZNF652Q9Y2D9 606 aa8.56□□□□□ -1.04
UBXN4-205ENST00000467065 SALL2Q9Y467 1007 aaPredicted RBP8.56□□□□□ -1.04
UBXN4-205ENST00000467065 TAF1P21675 1872 aa8.55□□□□□ -1.04
UBXN4-205ENST00000467065 FAM177BA6PVY3 158 aa8.55□□□□□ -1.04
UBXN4-205ENST00000467065 MYL6BP14649 208 aa8.55□□□□□ -1.04
UBXN4-205ENST00000467065 ST5P78524 1137 aa8.55□□□□□ -1.04
UBXN4-205ENST00000467065 HLFQ16534 295 aa8.55□□□□□ -1.04
UBXN4-205ENST00000467065 NBPF5PQ86XG9 351 aaPredicted RBP8.55□□□□□ -1.04
UBXN4-205ENST00000467065 CDAN1Q8IWY9 1227 aa8.55□□□□□ -1.04
UBXN4-205ENST00000467065 TTLL6Q8N841 843 aa8.55□□□□□ -1.04
UBXN4-205ENST00000467065 ZNF622Q969S3 477 aaKnown RBP eCLIP8.55□□□□□ -1.045e-8■■□□□ 12
UBXN4-205ENST00000467065 TRIM35Q9UPQ4 493 aa8.55□□□□□ -1.04
UBXN4-205ENST00000467065 LAS1LQ9Y4W2 734 aaKnown RBP8.55□□□□□ -1.04
UBXN4-205ENST00000467065 APAF1O14727 1248 aa8.54□□□□□ -1.04
UBXN4-205ENST00000467065 PDE6BP35913 854 aa8.54□□□□□ -1.04
UBXN4-205ENST00000467065 CLEC4GQ6UXB4 293 aa8.54□□□□□ -1.04
UBXN4-205ENST00000467065 TTLL7Q6ZT98 887 aa8.54□□□□□ -1.04
UBXN4-205ENST00000467065 BRIP1Q9BX63 1249 aa8.54□□□□□ -1.04
UBXN4-205ENST00000467065 NIP7Q9Y221 180 aaKnown RBP eCLIP8.54□□□□□ -1.04
UBXN4-205ENST00000467065 DDX60Q8IY21 1712 aaKnown RBP8.54□□□□□ -1.04
UBXN4-205ENST00000467065 WDR90Q96KV7 1748 aa8.54□□□□□ -1.04
UBXN4-205ENST00000467065 MAP3K15Q6ZN16 1313 aa8.54□□□□□ -1.04
UBXN4-205ENST00000467065 ABCC12Q96J65 1359 aa8.53□□□□□ -1.04
UBXN4-205ENST00000467065 NFKBIEO00221 500 aa8.53□□□□□ -1.04
UBXN4-205ENST00000467065 KIF3CO14782 793 aa8.53□□□□□ -1.04
UBXN4-205ENST00000467065 C21orf2O43822 256 aa8.53□□□□□ -1.04
UBXN4-205ENST00000467065 ANXA1P04083 346 aa8.53□□□□□ -1.04
UBXN4-205ENST00000467065 EIF2S2P20042 333 aaKnown RBP8.53□□□□□ -1.04
UBXN4-205ENST00000467065 PRELPP51888 382 aa8.53□□□□□ -1.04
UBXN4-205ENST00000467065 KRT24Q2M2I5 525 aa8.53□□□□□ -1.04
UBXN4-205ENST00000467065 KIF6Q6ZMV9 814 aa8.53□□□□□ -1.04
UBXN4-205ENST00000467065 NECTIN2Q92692 538 aa8.53□□□□□ -1.04
UBXN4-205ENST00000467065 ZBTB3Q9H5J0 574 aa8.53□□□□□ -1.04
UBXN4-205ENST00000467065 MYH16Q9H6N6 1097 aa8.53□□□□□ -1.04
UBXN4-205ENST00000467065 NMRK2Q9NPI5 230 aa8.53□□□□□ -1.04
UBXN4-205ENST00000467065 SRGNP10124 158 aa8.52□□□□□ -1.05
UBXN4-205ENST00000467065 GPTP24298 496 aa8.52□□□□□ -1.05
UBXN4-205ENST00000467065 PROSER3Q2NL68 480 aa8.52□□□□□ -1.05
UBXN4-205ENST00000467065 PRPF40BQ6NWY9 871 aaKnown RBP8.52□□□□□ -1.05
UBXN4-205ENST00000467065 PDZRN3Q9UPQ7 1066 aa8.52□□□□□ -1.05
UBXN4-205ENST00000467065 ERBB4Q15303 1308 aa8.52□□□□□ -1.05
UBXN4-205ENST00000467065 UBN2Q6ZU65 1347 aa8.52□□□□□ -1.05
UBXN4-205ENST00000467065 RGL2O15211 777 aa8.51□□□□□ -1.05
UBXN4-205ENST00000467065 LMNB1P20700 586 aa8.51□□□□□ -1.05
UBXN4-205ENST00000467065 NUBP1P53384 320 aa8.51□□□□□ -1.05
UBXN4-205ENST00000467065 GNAI1P63096 354 aa8.51□□□□□ -1.05
UBXN4-205ENST00000467065 PDIA6Q15084 440 aa8.51□□□□□ -1.05
UBXN4-205ENST00000467065 CCDC184Q52MB2 194 aa8.51□□□□□ -1.05
UBXN4-205ENST00000467065 STYK1Q6J9G0 422 aa8.51□□□□□ -1.05
UBXN4-205ENST00000467065 TPTE2Q6XPS3 522 aa8.51□□□□□ -1.05
UBXN4-205ENST00000467065 NUTM1Q86Y26 1132 aa8.51□□□□□ -1.05
UBXN4-205ENST00000467065 WDR63Q8IWG1 891 aa8.51□□□□□ -1.05
UBXN4-205ENST00000467065 MASTLQ96GX5 879 aa8.51□□□□□ -1.05
UBXN4-205ENST00000467065 BABAM1Q9NWV8 329 aa8.51□□□□□ -1.05
UBXN4-205ENST00000467065 PCDHB13Q9Y5F0 798 aa8.51□□□□□ -1.05
UBXN4-205ENST00000467065 IBTKQ9P2D0 1353 aaPredicted RBP8.5□□□□□ -1.05
UBXN4-205ENST00000467065 SPEF2Q9C093 1822 aa8.5□□□□□ -1.05
UBXN4-205ENST00000467065 ERVV-1B6SEH8 477 aa8.5□□□□□ -1.05
UBXN4-205ENST00000467065 CHL1O00533 1208 aa8.5□□□□□ -1.05
UBXN4-205ENST00000467065 CENPBP07199 599 aaPredicted RBP8.5□□□□□ -1.05
UBXN4-205ENST00000467065 GTF2E1P29083 439 aaPredicted RBP8.5□□□□□ -1.05
UBXN4-205ENST00000467065 GOLGA2Q08379 1002 aa8.5□□□□□ -1.05
UBXN4-205ENST00000467065 ERFEQ4G0M1 354 aa8.5□□□□□ -1.05
UBXN4-205ENST00000467065 LRP10Q7Z4F1 713 aa8.5□□□□□ -1.05
UBXN4-205ENST00000467065 CNKSR1Q969H4 720 aa8.5□□□□□ -1.05
UBXN4-205ENST00000467065 MYH3P11055 1940 aa8.5□□□□□ -1.05
UBXN4-205ENST00000467065 KDM2BQ8NHM5 1336 aa8.5□□□□□ -1.05
UBXN4-205ENST00000467065 CACNA1FO60840 1977 aa8.5□□□□□ -1.05
UBXN4-205ENST00000467065 SCN4AP35499 1836 aa8.5□□□□□ -1.05
UBXN4-205ENST00000467065 ST18O60284 1047 aa8.49□□□□□ -1.05
UBXN4-205ENST00000467065 NPR1P16066 1061 aa8.49□□□□□ -1.05
UBXN4-205ENST00000467065 AIMP1Q12904 312 aaKnown RBP8.49□□□□□ -1.05
UBXN4-205ENST00000467065 CCDC27Q2M243 656 aa8.49□□□□□ -1.05
UBXN4-205ENST00000467065 SUSD4Q5VX71 490 aa8.49□□□□□ -1.05
UBXN4-205ENST00000467065 OLFM4Q6UX06 510 aa8.49□□□□□ -1.05
UBXN4-205ENST00000467065 GIGYF2Q6Y7W6 1299 aaKnown RBP8.49□□□□□ -1.05
UBXN4-205ENST00000467065 IFNL1Q8IU54 200 aa8.49□□□□□ -1.05
UBXN4-205ENST00000467065 NYXQ9GZU5 481 aa8.49□□□□□ -1.05
UBXN4-205ENST00000467065 TAOK3Q9H2K8 898 aa8.49□□□□□ -1.05
UBXN4-205ENST00000467065 ZC3H4Q9UPT8 1303 aaKnown RBP8.49□□□□□ -1.05
UBXN4-205ENST00000467065 LRRC37AA6NMS7 1700 aa8.49□□□□□ -1.05
UBXN4-205ENST00000467065 RIC1Q4ADV7 1423 aa8.48□□□□□ -1.05
UBXN4-205ENST00000467065 KLRG2A4D1S0 409 aaPredicted RBP8.48□□□□□ -1.05
UBXN4-205ENST00000467065 E9PSI1 815 aa8.48□□□□□ -1.05
UBXN4-205ENST00000467065 NTSR2O95665 410 aa8.48□□□□□ -1.05
UBXN4-205ENST00000467065 HSPA6P17066 643 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms