RNA–Protein interactions for RNA: ENST00000467049.1

PTPDC1-203, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

TSL 2

Gene PTPDC1, Length 1,861 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-203ENST00000467049 HOXA10P31260 410 aaPredicted RBP11.9□□□□□ -0.5
PTPDC1-203ENST00000467049 WBP1LQ9NX94 342 aa11.9□□□□□ -0.5
PTPDC1-203ENST00000467049 COL4A5P29400 1685 aa11.9□□□□□ -0.5
PTPDC1-203ENST00000467049 RNF123Q5XPI4 1314 aa11.9□□□□□ -0.51
PTPDC1-203ENST00000467049 ANKRD36CQ5JPF3 1778 aa11.89□□□□□ -0.51
PTPDC1-203ENST00000467049 CNTROBQ8N137 903 aa11.89□□□□□ -0.51
PTPDC1-203ENST00000467049 JDP2Q8WYK2 163 aa11.89□□□□□ -0.51
PTPDC1-203ENST00000467049 EIF6P56537 245 aaKnown RBP11.89□□□□□ -0.51
PTPDC1-203ENST00000467049 DEFB115Q30KQ5 88 aa11.89□□□□□ -0.51
PTPDC1-203ENST00000467049 LAMB2P55268 1798 aa11.88□□□□□ -0.51
PTPDC1-203ENST00000467049 MAP1SQ66K74 1059 aaPredicted RBP11.88□□□□□ -0.51
PTPDC1-203ENST00000467049 KIF6Q6ZMV9 814 aa11.88□□□□□ -0.51
PTPDC1-203ENST00000467049 RPGRQ92834 1020 aaKnown RBP11.88□□□□□ -0.51
PTPDC1-203ENST00000467049 CRAMP1Q96RY5 1269 aa11.88□□□□□ -0.51
PTPDC1-203ENST00000467049 LMOD1P29536 600 aaPredicted RBP11.87□□□□□ -0.51
PTPDC1-203ENST00000467049 NUTM1Q86Y26 1132 aa11.87□□□□□ -0.51
PTPDC1-203ENST00000467049 ERBB4Q15303 1308 aa11.87□□□□□ -0.51
PTPDC1-203ENST00000467049 NEFMP07197 916 aa11.87□□□□□ -0.51
PTPDC1-203ENST00000467049 HSPA8P11142 646 aaKnown RBP11.87□□□□□ -0.51
PTPDC1-203ENST00000467049 EIF4A1P60842 406 aaKnown RBP11.87□□□□□ -0.51
PTPDC1-203ENST00000467049 MAP2K1Q02750 393 aaPredicted RBP11.87□□□□□ -0.51
PTPDC1-203ENST00000467049 RBM17Q96I25 401 aaKnown RBP11.87□□□□□ -0.51
PTPDC1-203ENST00000467049 MIS18AQ9NYP9 233 aa11.87□□□□□ -0.51
PTPDC1-203ENST00000467049 UBN2Q6ZU65 1347 aa11.86□□□□□ -0.51
PTPDC1-203ENST00000467049 WDR33Q9C0J8 1336 aaKnown RBP11.86□□□□□ -0.51
PTPDC1-203ENST00000467049 LBX1P52954 281 aa11.86□□□□□ -0.51
PTPDC1-203ENST00000467049 TTLL7Q6ZT98 887 aa11.86□□□□□ -0.51
PTPDC1-203ENST00000467049 ZNF34Q8IZ26 560 aa11.86□□□□□ -0.51
PTPDC1-203ENST00000467049 DDX21Q9NR30 783 aaKnown RBP eCLIP11.86□□□□□ -0.51
PTPDC1-203ENST00000467049 GJA3Q9Y6H8 435 aa11.86□□□□□ -0.51
PTPDC1-203ENST00000467049 PPEF1O14829 653 aaPredicted RBP11.85□□□□□ -0.51
PTPDC1-203ENST00000467049 SCNN1DP51172 638 aa11.85□□□□□ -0.51
PTPDC1-203ENST00000467049 USP50Q70EL3 339 aaPredicted RBP11.85□□□□□ -0.51
PTPDC1-203ENST00000467049 LARGE2Q8N3Y3 721 aa11.85□□□□□ -0.51
PTPDC1-203ENST00000467049 NGEFQ8N5V2 710 aa11.85□□□□□ -0.51
PTPDC1-203ENST00000467049 VPS33BQ9H267 617 aa11.85□□□□□ -0.51
PTPDC1-203ENST00000467049 ABT1Q9ULW3 272 aaKnown RBP11.85□□□□□ -0.51
PTPDC1-203ENST00000467049 NTSR2O95665 410 aa11.85□□□□□ -0.51
PTPDC1-203ENST00000467049 ECE1P42892 770 aa11.85□□□□□ -0.51
PTPDC1-203ENST00000467049 NFE2L2Q16236 605 aa11.85□□□□□ -0.51
PTPDC1-203ENST00000467049 PARP10Q53GL7 1025 aa11.85□□□□□ -0.51
PTPDC1-203ENST00000467049 SUSD4Q5VX71 490 aa11.85□□□□□ -0.51
PTPDC1-203ENST00000467049 NIM1KQ8IY84 436 aa11.85□□□□□ -0.51
PTPDC1-203ENST00000467049 RRP7AQ9Y3A4 280 aaKnown RBP11.85□□□□□ -0.51
PTPDC1-203ENST00000467049 GPTP24298 496 aa11.84□□□□□ -0.51
PTPDC1-203ENST00000467049 GIGYF2Q6Y7W6 1299 aaKnown RBP11.84□□□□□ -0.51
PTPDC1-203ENST00000467049 PPP1R42Q7Z4L9 355 aa11.84□□□□□ -0.51
PTPDC1-203ENST00000467049 PLEKHF1Q96S99 279 aa11.84□□□□□ -0.51
PTPDC1-203ENST00000467049 ZBTB3Q9H5J0 574 aa11.84□□□□□ -0.51
PTPDC1-203ENST00000467049 EPS15P42566 896 aa11.83□□□□□ -0.52
PTPDC1-203ENST00000467049 PCNTO95613 3336 aa11.83□□□□□ -0.52
PTPDC1-203ENST00000467049 MYL6BP14649 208 aa11.83□□□□□ -0.52
PTPDC1-203ENST00000467049 SLC10A5Q5PT55 438 aa11.83□□□□□ -0.52
PTPDC1-203ENST00000467049 SUPT20HQ8NEM7 779 aa11.83□□□□□ -0.52
PTPDC1-203ENST00000467049 CAPNS2Q96L46 248 aa11.83□□□□□ -0.52
PTPDC1-203ENST00000467049 ATP6V0A2Q9Y487 856 aa11.83□□□□□ -0.52
PTPDC1-203ENST00000467049 PPIP5K2O43314 1243 aa11.82□□□□□ -0.52
PTPDC1-203ENST00000467049 ABHD8Q96I13 439 aa11.82□□□□□ -0.52
PTPDC1-203ENST00000467049 NLRP3Q96P20 1036 aa11.82□□□□□ -0.52
PTPDC1-203ENST00000467049 TMX4Q9H1E5 349 aaPredicted RBP11.82□□□□□ -0.52
PTPDC1-203ENST00000467049 PNNQ9H307 717 aaKnown RBP11.82□□□□□ -0.52
PTPDC1-203ENST00000467049 ADARB2Q9NS39 739 aaKnown RBP11.82□□□□□ -0.52
PTPDC1-203ENST00000467049 LRRC37AA6NMS7 1700 aa11.82□□□□□ -0.52
PTPDC1-203ENST00000467049 C3orf67Q6ZVT6 689 aa11.81□□□□□ -0.52
PTPDC1-203ENST00000467049 LRP10Q7Z4F1 713 aa11.81□□□□□ -0.52
PTPDC1-203ENST00000467049 RTFDC1Q9BY42 306 aaPredicted RBP11.81□□□□□ -0.52
PTPDC1-203ENST00000467049 GPRC5DQ9NZD1 345 aa11.81□□□□□ -0.52
PTPDC1-203ENST00000467049 TLL2Q9Y6L7 1015 aa11.81□□□□□ -0.52
PTPDC1-203ENST00000467049 CDHR2Q9BYE9 1310 aa11.81□□□□□ -0.52
PTPDC1-203ENST00000467049 THUMPD2Q9BTF0 503 aaKnown RBP11.8□□□□□ -0.52
PTPDC1-203ENST00000467049 UTP14AQ9BVJ6 771 aaKnown RBP11.8□□□□□ -0.52
PTPDC1-203ENST00000467049 BABAM1Q9NWV8 329 aa11.8□□□□□ -0.52
PTPDC1-203ENST00000467049 ZNRF3Q9ULT6 936 aa11.8□□□□□ -0.52
PTPDC1-203ENST00000467049 AOC3Q16853 763 aa11.8□□□□□ -0.52
PTPDC1-203ENST00000467049 CST9Q5W186 159 aa11.8□□□□□ -0.52
PTPDC1-203ENST00000467049 SLC51AQ86UW1 340 aa11.8□□□□□ -0.52
PTPDC1-203ENST00000467049 BEGAINQ9BUH8 593 aa11.8□□□□□ -0.52
PTPDC1-203ENST00000467049 ABCC4O15439 1325 aa11.8□□□□□ -0.52
PTPDC1-203ENST00000467049 MAPK8IP3Q9UPT6 1336 aa11.8□□□□□ -0.52
PTPDC1-203ENST00000467049 TAF1P21675 1872 aa11.8□□□□□ -0.52
PTPDC1-203ENST00000467049 TRAF5O00463 557 aa11.79□□□□□ -0.52
PTPDC1-203ENST00000467049 BBOX1O75936 387 aa11.79□□□□□ -0.52
PTPDC1-203ENST00000467049 MAP2K2P36507 400 aa11.79□□□□□ -0.52
PTPDC1-203ENST00000467049 FMR1Q06787 632 aaKnown RBP eCLIP11.79□□□□□ -0.52
PTPDC1-203ENST00000467049 CXCL9Q07325 125 aa11.79□□□□□ -0.52
PTPDC1-203ENST00000467049 PDIA6Q15084 440 aa11.79□□□□□ -0.52
PTPDC1-203ENST00000467049 HSP90AB3PQ58FF7 597 aa11.79□□□□□ -0.52
PTPDC1-203ENST00000467049 SP8Q8IXZ3 490 aa11.79□□□□□ -0.52
PTPDC1-203ENST00000467049 DDX60Q8IY21 1712 aaKnown RBP11.79□□□□□ -0.52
PTPDC1-203ENST00000467049 HHIPL1Q96JK4 782 aa11.79□□□□□ -0.52
PTPDC1-203ENST00000467049 GPR101Q96P66 508 aaPredicted RBP11.79□□□□□ -0.52
PTPDC1-203ENST00000467049 TCERG1O14776 1098 aaKnown RBP11.78□□□□□ -0.52
PTPDC1-203ENST00000467049 CYP4F22Q6NT55 531 aa11.78□□□□□ -0.52
PTPDC1-203ENST00000467049 PAXIP1Q6ZW49 1069 aaPredicted RBP11.78□□□□□ -0.52
PTPDC1-203ENST00000467049 PGAP2Q9UHJ9 254 aa11.78□□□□□ -0.52
PTPDC1-203ENST00000467049 TSPYL4Q9UJ04 414 aa11.78□□□□□ -0.52
PTPDC1-203ENST00000467049 DUOX1Q9NRD9 1551 aa11.78□□□□□ -0.52
PTPDC1-203ENST00000467049 CACNB1Q02641 598 aaPredicted RBP11.78□□□□□ -0.52
PTPDC1-203ENST00000467049 CA12O43570 354 aa11.77□□□□□ -0.53
PTPDC1-203ENST00000467049 GMPSP49915 693 aaPredicted RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms