RNA–Protein interactions for RNA: ENST00000465788.1

SRM-203, Transcript of spermidine synthase, humanhuman

TSL 5

Gene SRM, Length 402 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-203ENST00000465788 CREBZFQ9NS37 354 aa16.79■□□□□ 0.28
SRM-203ENST00000465788 GPTP24298 496 aa16.78■□□□□ 0.28
SRM-203ENST00000465788 TAF1DQ9H5J8 278 aaPredicted RBP16.78■□□□□ 0.28
SRM-203ENST00000465788 HACL1Q9UJ83 578 aa16.78■□□□□ 0.28
SRM-203ENST00000465788 UBN2Q6ZU65 1347 aa16.77■□□□□ 0.28
SRM-203ENST00000465788 FZD9O00144 591 aa16.77■□□□□ 0.28
SRM-203ENST00000465788 NTSR2O95665 410 aa16.77■□□□□ 0.28
SRM-203ENST00000465788 WDR43Q15061 677 aaKnown RBP eCLIP16.77■□□□□ 0.28
SRM-203ENST00000465788 SUSD4Q5VX71 490 aa16.77■□□□□ 0.28
SRM-203ENST00000465788 PNMA8AQ86V59 439 aaPredicted RBP16.77■□□□□ 0.28
SRM-203ENST00000465788 NLRP3Q96P20 1036 aa16.77■□□□□ 0.28
SRM-203ENST00000465788 ANKRD36CQ5JPF3 1778 aa16.77■□□□□ 0.27
SRM-203ENST00000465788 EIF2S2P20042 333 aaKnown RBP16.76■□□□□ 0.27
SRM-203ENST00000465788 EIF6P56537 245 aaKnown RBP16.76■□□□□ 0.27
SRM-203ENST00000465788 GPC2Q8N158 579 aa16.76■□□□□ 0.27
SRM-203ENST00000465788 UTP14AQ9BVJ6 771 aaKnown RBP16.76■□□□□ 0.27
SRM-203ENST00000465788 VPS33BQ9H267 617 aa16.76■□□□□ 0.27
SRM-203ENST00000465788 SNED1Q8TER0 1413 aa16.76■□□□□ 0.27
SRM-203ENST00000465788 RUNDC1Q96C34 613 aa16.75■□□□□ 0.27
SRM-203ENST00000465788 ZNF541Q9H0D2 1346 aa16.74■□□□□ 0.27
SRM-203ENST00000465788 PPEF1O14829 653 aaPredicted RBP16.74■□□□□ 0.27
SRM-203ENST00000465788 HOXB7P09629 217 aa16.74■□□□□ 0.27
SRM-203ENST00000465788 PDIA6Q15084 440 aa16.74■□□□□ 0.27
SRM-203ENST00000465788 SLC10A5Q5PT55 438 aa16.74■□□□□ 0.27
SRM-203ENST00000465788 LRP10Q7Z4F1 713 aa16.74■□□□□ 0.27
SRM-203ENST00000465788 EPHX2P34913 555 aa16.73■□□□□ 0.27
SRM-203ENST00000465788 DDX10Q13206 875 aaKnown RBP16.73■□□□□ 0.27
SRM-203ENST00000465788 OLFM4Q6UX06 510 aa16.73■□□□□ 0.27
SRM-203ENST00000465788 SUPT20HQ8NEM7 779 aa16.73■□□□□ 0.27
SRM-203ENST00000465788 DDX21Q9NR30 783 aaKnown RBP eCLIP16.73■□□□□ 0.27
SRM-203ENST00000465788 PASKQ96RG2 1323 aa16.72■□□□□ 0.27
SRM-203ENST00000465788 CHL1O00533 1208 aa16.72■□□□□ 0.27
SRM-203ENST00000465788 LMOD1P29536 600 aaPredicted RBP16.72■□□□□ 0.27
SRM-203ENST00000465788 EAPPQ56P03 285 aaPredicted RBP16.72■□□□□ 0.27
SRM-203ENST00000465788 LARGE2Q8N3Y3 721 aa16.72■□□□□ 0.27
SRM-203ENST00000465788 BBOX1O75936 387 aa16.71■□□□□ 0.27
SRM-203ENST00000465788 POTEIP0CG38 1075 aa16.71■□□□□ 0.27
SRM-203ENST00000465788 POTEJP0CG39 1038 aa16.71■□□□□ 0.27
SRM-203ENST00000465788 COPS6Q7L5N1 327 aa16.71■□□□□ 0.27
SRM-203ENST00000465788 NIM1KQ8IY84 436 aa16.71■□□□□ 0.27
SRM-203ENST00000465788 CLEC11AQ9Y240 323 aa16.71■□□□□ 0.27
SRM-203ENST00000465788 ATP6V0A2Q9Y487 856 aa16.71■□□□□ 0.27
SRM-203ENST00000465788 ADAMTSL1Q8N6G6 1762 aa16.71■□□□□ 0.27
SRM-203ENST00000465788 TMEM88BA6NKF7 163 aa16.7■□□□□ 0.26
SRM-203ENST00000465788 HSPA1AP0DMV8 641 aaKnown RBP16.7■□□□□ 0.26
SRM-203ENST00000465788 HSPA1BP0DMV9 641 aaKnown RBP16.7■□□□□ 0.26
SRM-203ENST00000465788 TCIRG1Q13488 830 aa16.7■□□□□ 0.26
SRM-203ENST00000465788 NEUROD2Q15784 382 aa16.7■□□□□ 0.26
SRM-203ENST00000465788 TMC4Q7Z404 712 aa16.7■□□□□ 0.26
SRM-203ENST00000465788 XAGE3Q8WTP9 111 aa16.7■□□□□ 0.26
SRM-203ENST00000465788 CNTNAP1P78357 1384 aa16.69■□□□□ 0.26
SRM-203ENST00000465788 PROSER3Q2NL68 480 aa16.69■□□□□ 0.26
SRM-203ENST00000465788 NLRP10Q86W26 655 aa16.69■□□□□ 0.26
SRM-203ENST00000465788 CCDC146Q8IYE0 955 aa16.69■□□□□ 0.26
SRM-203ENST00000465788 SH3TC1Q8TE82 1336 aa16.69■□□□□ 0.26
SRM-203ENST00000465788 PPIP5K2O43314 1243 aa16.68■□□□□ 0.26
SRM-203ENST00000465788 ITGBL1O95965 494 aaPredicted RBP16.68■□□□□ 0.26
SRM-203ENST00000465788 CALD1Q05682 793 aaKnown RBP16.68■□□□□ 0.26
SRM-203ENST00000465788 AIMP1Q12904 312 aaKnown RBP16.68■□□□□ 0.26
SRM-203ENST00000465788 HDGFL1Q5TGJ6 251 aa16.68■□□□□ 0.26
SRM-203ENST00000465788 DDX46Q7L014 1031 aaKnown RBP16.68■□□□□ 0.26
SRM-203ENST00000465788 CHMP4AQ9BY43 222 aa16.68■□□□□ 0.26
SRM-203ENST00000465788 DBF4Q9UBU7 674 aaPredicted RBP16.68■□□□□ 0.26
SRM-203ENST00000465788 TRMT112Q9UI30 125 aaKnown RBP16.68■□□□□ 0.26
SRM-203ENST00000465788 LAS1LQ9Y4W2 734 aaKnown RBP16.68■□□□□ 0.26
SRM-203ENST00000465788 GJA3Q9Y6H8 435 aa16.68■□□□□ 0.26
SRM-203ENST00000465788 LAMB2P55268 1798 aa16.68■□□□□ 0.26
SRM-203ENST00000465788 ANXA1P04083 346 aa16.67■□□□□ 0.26
SRM-203ENST00000465788 SP8Q8IXZ3 490 aa16.67■□□□□ 0.26
SRM-203ENST00000465788 CNTROBQ8N137 903 aa16.67■□□□□ 0.26
SRM-203ENST00000465788 PLBD2Q8NHP8 589 aa16.67■□□□□ 0.26
SRM-203ENST00000465788 CFAP44Q96MT7 982 aa16.67■□□□□ 0.26
SRM-203ENST00000465788 RTFDC1Q9BY42 306 aaPredicted RBP16.67■□□□□ 0.26
SRM-203ENST00000465788 HYPKQ9NX55 129 aa16.67■□□□□ 0.26
SRM-203ENST00000465788 MKRN1Q9UHC7 482 aaKnown RBP16.67■□□□□ 0.26
SRM-203ENST00000465788 TRIM35Q9UPQ4 493 aa16.67■□□□□ 0.26
SRM-203ENST00000465788 ABCC4O15439 1325 aa16.67■□□□□ 0.26
SRM-203ENST00000465788 COL13A1Q5TAT6 717 aaPredicted RBP16.66■□□□□ 0.26
SRM-203ENST00000465788 DPP8Q6V1X1 898 aaPredicted RBP16.66■□□□□ 0.26
SRM-203ENST00000465788 C3orf67Q6ZVT6 689 aa16.66■□□□□ 0.26
SRM-203ENST00000465788 USP50Q70EL3 339 aaPredicted RBP16.66■□□□□ 0.26
SRM-203ENST00000465788 TNS4Q8IZW8 715 aa16.66■□□□□ 0.26
SRM-203ENST00000465788 NECTIN2Q92692 538 aa16.66■□□□□ 0.26
SRM-203ENST00000465788 ADAMTS8Q9UP79 889 aa16.66■□□□□ 0.26
SRM-203ENST00000465788 TCERG1O14776 1098 aaKnown RBP16.65■□□□□ 0.26
SRM-203ENST00000465788 HSP90B1P14625 803 aaKnown RBP16.65■□□□□ 0.26
SRM-203ENST00000465788 GRAPQ13588 217 aa16.65■□□□□ 0.26
SRM-203ENST00000465788 ANKRD13DQ6ZTN6 518 aa16.65■□□□□ 0.26
SRM-203ENST00000465788 MPNDQ8N594 471 aa16.65■□□□□ 0.26
SRM-203ENST00000465788 GRAPLQ8TC17 118 aaPredicted RBP16.65■□□□□ 0.26
SRM-203ENST00000465788 CHPF2Q9P2E5 772 aa16.65■□□□□ 0.26
SRM-203ENST00000465788 CDHR2Q9BYE9 1310 aa16.65■□□□□ 0.26
SRM-203ENST00000465788 PCNTO95613 3336 aa16.65■□□□□ 0.26
SRM-203ENST00000465788 PRKRIP1Q9H875 184 aaPredicted RBP16.64■□□□□ 0.25
SRM-203ENST00000465788 ZNRF3Q9ULT6 936 aa16.64■□□□□ 0.25
SRM-203ENST00000465788 COL4A5P29400 1685 aa16.64■□□□□ 0.25
SRM-203ENST00000465788 HCLS1P14317 486 aaPredicted RBP16.63■□□□□ 0.25
SRM-203ENST00000465788 SCNN1DP51172 638 aa16.63■□□□□ 0.25
SRM-203ENST00000465788 AOC3Q16853 763 aa16.63■□□□□ 0.25
SRM-203ENST00000465788 MAP1SQ66K74 1059 aaPredicted RBP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms