RNA–Protein interactions for RNA: ENST00000465187.1

EDEM1-205, Transcript of ER degradation enhancing alpha-mannosidase like protein 1, humanhuman

TSL 4

Gene EDEM1, Length 585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM1-205ENST00000465187 WDR43Q15061 677 aaKnown RBP eCLIP28.35■■■□□ 2.13
EDEM1-205ENST00000465187 ZNF428Q96B54 188 aa28.35■■■□□ 2.13
EDEM1-205ENST00000465187 PRKRIP1Q9H875 184 aaPredicted RBP28.35■■■□□ 2.13
EDEM1-205ENST00000465187 IBTKQ9P2D0 1353 aaPredicted RBP28.35■■■□□ 2.13
EDEM1-205ENST00000465187 CHL1O00533 1208 aa28.34■■■□□ 2.13
EDEM1-205ENST00000465187 AIMP1Q12904 312 aaKnown RBP28.34■■■□□ 2.13
EDEM1-205ENST00000465187 RIC1Q4ADV7 1423 aa28.34■■■□□ 2.13
EDEM1-205ENST00000465187 BABAM1Q9NWV8 329 aa28.33■■■□□ 2.13
EDEM1-205ENST00000465187 TAF1P21675 1872 aa28.33■■■□□ 2.13
EDEM1-205ENST00000465187 ZNF316A6NFI3 1004 aaPredicted RBP28.32■■■□□ 2.12
EDEM1-205ENST00000465187 TCERG1O14776 1098 aaKnown RBP28.32■■■□□ 2.12
EDEM1-205ENST00000465187 ALDH1B1P30837 517 aa28.32■■■□□ 2.12
EDEM1-205ENST00000465187 COPS6Q7L5N1 327 aa28.32■■■□□ 2.12
EDEM1-205ENST00000465187 SYNE4Q8N205 404 aa28.32■■■□□ 2.12
EDEM1-205ENST00000465187 XAGE3Q8WTP9 111 aa28.32■■■□□ 2.12
EDEM1-205ENST00000465187 KLRG1Q96E93 195 aa28.31■■■□□ 2.12
EDEM1-205ENST00000465187 SCN4AP35499 1836 aa28.29■■■□□ 2.12
EDEM1-205ENST00000465187 HOXA10P31260 410 aaPredicted RBP28.29■■■□□ 2.12
EDEM1-205ENST00000465187 RPGRQ92834 1020 aaKnown RBP28.29■■■□□ 2.12
EDEM1-205ENST00000465187 CHPF2Q9P2E5 772 aa28.29■■■□□ 2.12
EDEM1-205ENST00000465187 RTKN2Q8IZC4 609 aa28.28■■■□□ 2.12
EDEM1-205ENST00000465187 IARSP41252 1262 aaKnown RBP28.27■■■□□ 2.12
EDEM1-205ENST00000465187 PPP1R42Q7Z4L9 355 aa28.26■■■□□ 2.11
EDEM1-205ENST00000465187 DDX60Q8IY21 1712 aaKnown RBP28.26■■■□□ 2.11
EDEM1-205ENST00000465187 PARP10Q53GL7 1025 aa28.25■■■□□ 2.11
EDEM1-205ENST00000465187 UTP14AQ9BVJ6 771 aaKnown RBP28.25■■■□□ 2.11
EDEM1-205ENST00000465187 DDX21Q9NR30 783 aaKnown RBP eCLIP28.25■■■□□ 2.11
EDEM1-205ENST00000465187 ADAMTSL1Q8N6G6 1762 aa28.24■■■□□ 2.11
EDEM1-205ENST00000465187 LTBP1Q14766 1721 aa28.24■■■□□ 2.11
EDEM1-205ENST00000465187 PPEF1O14829 653 aaPredicted RBP28.24■■■□□ 2.11
EDEM1-205ENST00000465187 CCDC184Q52MB2 194 aa28.24■■■□□ 2.11
EDEM1-205ENST00000465187 NLRP10Q86W26 655 aa28.24■■■□□ 2.11
EDEM1-205ENST00000465187 L3MBTL3Q96JM7 780 aaPredicted RBP28.24■■■□□ 2.11
EDEM1-205ENST00000465187 COL4A1P02462 1669 aa28.23■■■□□ 2.11
EDEM1-205ENST00000465187 PCNTO95613 3336 aa28.23■■■□□ 2.11
EDEM1-205ENST00000465187 HCLS1P14317 486 aaPredicted RBP28.23■■■□□ 2.11
EDEM1-205ENST00000465187 JMYQ8N9B5 988 aa28.23■■■□□ 2.11
EDEM1-205ENST00000465187 RBM17Q96I25 401 aaKnown RBP28.23■■■□□ 2.11
EDEM1-205ENST00000465187 CRAMP1Q96RY5 1269 aa28.23■■■□□ 2.11
EDEM1-205ENST00000465187 PSMD1Q99460 953 aa28.23■■■□□ 2.11
EDEM1-205ENST00000465187 TAF1DQ9H5J8 278 aaPredicted RBP28.23■■■□□ 2.11
EDEM1-205ENST00000465187 MBIPQ9NS73 344 aa28.23■■■□□ 2.11
EDEM1-205ENST00000465187 FZD9O00144 591 aa28.22■■■□□ 2.11
EDEM1-205ENST00000465187 APAF1O14727 1248 aa28.22■■■□□ 2.11
EDEM1-205ENST00000465187 HDGFL1Q5TGJ6 251 aa28.22■■■□□ 2.11
EDEM1-205ENST00000465187 CHADLQ6NUI6 762 aa28.22■■■□□ 2.11
EDEM1-205ENST00000465187 ABCC4O15439 1325 aa28.21■■■□□ 2.11
EDEM1-205ENST00000465187 RNF123Q5XPI4 1314 aa28.21■■■□□ 2.11
EDEM1-205ENST00000465187 TCIRG1Q13488 830 aa28.21■■■□□ 2.11
EDEM1-205ENST00000465187 SLC10A5Q5PT55 438 aa28.21■■■□□ 2.11
EDEM1-205ENST00000465187 IFFO2Q5TF58 517 aa28.21■■■□□ 2.11
EDEM1-205ENST00000465187 NLRP3Q96P20 1036 aa28.2■■■□□ 2.1
EDEM1-205ENST00000465187 DUSP27Q5VZP5 1158 aa28.19■■■□□ 2.1
EDEM1-205ENST00000465187 CFAP44Q96MT7 982 aa28.19■■■□□ 2.1
EDEM1-205ENST00000465187 ZNF853P0CG23 659 aa28.18■■■□□ 2.1
EDEM1-205ENST00000465187 EAPPQ56P03 285 aaPredicted RBP28.17■■■□□ 2.1
EDEM1-205ENST00000465187 TRMT112Q9UI30 125 aaKnown RBP28.17■■■□□ 2.1
EDEM1-205ENST00000465187 IQCA1LA6NCM1 817 aa28.16■■■□□ 2.1
EDEM1-205ENST00000465187 ATP5J2-PTCD1G3V325 749 aa28.16■■■□□ 2.1
EDEM1-205ENST00000465187 ELL2O00472 640 aaPredicted RBP28.15■■■□□ 2.1
EDEM1-205ENST00000465187 HSP90AB3PQ58FF7 597 aa28.15■■■□□ 2.1
EDEM1-205ENST00000465187 CC2D2BQ6DHV5 1058 aa28.15■■■□□ 2.1
EDEM1-205ENST00000465187 HACL1Q9UJ83 578 aa28.15■■■□□ 2.1
EDEM1-205ENST00000465187 GJA3Q9Y6H8 435 aa28.15■■■□□ 2.1
EDEM1-205ENST00000465187 EPHX2P34913 555 aa28.14■■■□□ 2.1
EDEM1-205ENST00000465187 LDHDQ86WU2 507 aa28.14■■■□□ 2.1
EDEM1-205ENST00000465187 LARGE2Q8N3Y3 721 aa28.14■■■□□ 2.1
EDEM1-205ENST00000465187 PLBD2Q8NHP8 589 aa28.14■■■□□ 2.1
EDEM1-205ENST00000465187 ATP6V0A2Q9Y487 856 aa28.14■■■□□ 2.1
EDEM1-205ENST00000465187 HOXB7P09629 217 aa28.13■■■□□ 2.09
EDEM1-205ENST00000465187 AOC3Q16853 763 aa28.13■■■□□ 2.09
EDEM1-205ENST00000465187 JDP2Q8WYK2 163 aa28.13■■■□□ 2.09
EDEM1-205ENST00000465187 DBF4Q9UBU7 674 aaPredicted RBP28.13■■■□□ 2.09
EDEM1-205ENST00000465187 SH3TC1Q8TE82 1336 aa28.13■■■□□ 2.09
EDEM1-205ENST00000465187 PASKQ96RG2 1323 aa28.13■■■□□ 2.09
EDEM1-205ENST00000465187 DUOX1Q9NRD9 1551 aa28.12■■■□□ 2.09
EDEM1-205ENST00000465187 RTL5Q5HYW3 569 aaPredicted RBP28.12■■■□□ 2.09
EDEM1-205ENST00000465187 ANKRD13DQ6ZTN6 518 aa28.12■■■□□ 2.09
EDEM1-205ENST00000465187 GPC2Q8N158 579 aa28.12■■■□□ 2.09
EDEM1-205ENST00000465187 ISCA1Q9BUE6 129 aa28.12■■■□□ 2.09
EDEM1-205ENST00000465187 PHAXQ9H814 394 aaKnown RBP28.12■■■□□ 2.09
EDEM1-205ENST00000465187 LRRC37AA6NMS7 1700 aa28.12■■■□□ 2.09
EDEM1-205ENST00000465187 FAM89AQ96GI7 184 aa28.11■■■□□ 2.09
EDEM1-205ENST00000465187 MKRN1Q9UHC7 482 aaKnown RBP28.11■■■□□ 2.09
EDEM1-205ENST00000465187 PPIP5K2O43314 1243 aa28.1■■■□□ 2.09
EDEM1-205ENST00000465187 ITGBL1O95965 494 aaPredicted RBP28.1■■■□□ 2.09
EDEM1-205ENST00000465187 C8orf58Q8NAV2 365 aa28.1■■■□□ 2.09
EDEM1-205ENST00000465187 SCNN1DP51172 638 aa28.09■■■□□ 2.09
EDEM1-205ENST00000465187 MAP1SQ66K74 1059 aaPredicted RBP28.09■■■□□ 2.09
EDEM1-205ENST00000465187 IFT57Q9NWB7 429 aa28.09■■■□□ 2.09
EDEM1-205ENST00000465187 CLEC11AQ9Y240 323 aa28.09■■■□□ 2.09
EDEM1-205ENST00000465187 EPS15P42566 896 aa28.08■■■□□ 2.09
EDEM1-205ENST00000465187 EIF6P56537 245 aaKnown RBP28.08■■■□□ 2.09
EDEM1-205ENST00000465187 COL13A1Q5TAT6 717 aaPredicted RBP28.08■■■□□ 2.09
EDEM1-205ENST00000465187 CREBZFQ9NS37 354 aa28.08■■■□□ 2.09
EDEM1-205ENST00000465187 HYPKQ9NX55 129 aa28.07■■■□□ 2.08
EDEM1-205ENST00000465187 FMR1Q06787 632 aaKnown RBP eCLIP28.06■■■□□ 2.089e-8■□□□□ 11.3
EDEM1-205ENST00000465187 GRAPQ13588 217 aa28.06■■■□□ 2.08
EDEM1-205ENST00000465187 NIM1KQ8IY84 436 aa28.06■■■□□ 2.08
EDEM1-205ENST00000465187 TSPYL6Q8N831 410 aa28.06■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms