RNA–Protein interactions for RNA: ENST00000464437.1

RPGR-204, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 3

Gene RPGR, Length 428 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-204ENST00000464437 RPS6KA4O75676 772 aa8.67□□□□□ -1.02
RPGR-204ENST00000464437 TRAPPC3LQ5T215 181 aa8.67□□□□□ -1.02
RPGR-204ENST00000464437 CCDC146Q8IYE0 955 aa8.67□□□□□ -1.02
RPGR-204ENST00000464437 ZNF496Q96IT1 587 aaPredicted RBP8.67□□□□□ -1.02
RPGR-204ENST00000464437 FMNL2Q96PY5 1086 aa8.67□□□□□ -1.02
RPGR-204ENST00000464437 ADAM33Q9BZ11 813 aa8.67□□□□□ -1.02
RPGR-204ENST00000464437 FHDC1Q9C0D6 1143 aaPredicted RBP8.67□□□□□ -1.02
RPGR-204ENST00000464437 HEG1Q9ULI3 1381 aa8.67□□□□□ -1.02
RPGR-204ENST00000464437 DLG5Q8TDM6 1919 aa8.66□□□□□ -1.02
RPGR-204ENST00000464437 COL24A1Q17RW2 1714 aa8.66□□□□□ -1.02
RPGR-204ENST00000464437 LCE2BO14633 110 aa8.66□□□□□ -1.02
RPGR-204ENST00000464437 RFC4P35249 363 aa8.66□□□□□ -1.02
RPGR-204ENST00000464437 BCAMP50895 628 aa8.66□□□□□ -1.02
RPGR-204ENST00000464437 RIPK4P57078 832 aa8.66□□□□□ -1.02
RPGR-204ENST00000464437 RUNDC1Q96C34 613 aa8.66□□□□□ -1.02
RPGR-204ENST00000464437 CCDC87Q9NVE4 849 aa8.66□□□□□ -1.02
RPGR-204ENST00000464437 ADAMTS8Q9UP79 889 aa8.66□□□□□ -1.02
RPGR-204ENST00000464437 C4AP0C0L4 1744 aa8.66□□□□□ -1.02
RPGR-204ENST00000464437 KCNQ3O43525 872 aa8.65□□□□□ -1.02
RPGR-204ENST00000464437 STARD3NLO95772 234 aa8.65□□□□□ -1.02
RPGR-204ENST00000464437 CYP19A1P11511 503 aaPredicted RBP8.65□□□□□ -1.02
RPGR-204ENST00000464437 TMPOP42166 694 aaKnown RBP8.65□□□□□ -1.02
RPGR-204ENST00000464437 LMOD3Q0VAK6 560 aa8.65□□□□□ -1.02
RPGR-204ENST00000464437 TAF7Q15545 349 aaPredicted RBP8.65□□□□□ -1.02
RPGR-204ENST00000464437 NEUROD2Q15784 382 aa8.65□□□□□ -1.02
RPGR-204ENST00000464437 INTS5Q6P9B9 1019 aaKnown RBP8.65□□□□□ -1.02
RPGR-204ENST00000464437 ANKK1Q8NFD2 765 aa8.65□□□□□ -1.02
RPGR-204ENST00000464437 ARHGEF1Q92888 912 aaKnown RBP8.65□□□□□ -1.02
RPGR-204ENST00000464437 THUMPD2Q9BTF0 503 aaKnown RBP8.65□□□□□ -1.02
RPGR-204ENST00000464437 RRP7AQ9Y3A4 280 aaKnown RBP8.65□□□□□ -1.02
RPGR-204ENST00000464437 COL15A1P39059 1388 aa8.64□□□□□ -1.03
RPGR-204ENST00000464437 SOS1Q07889 1333 aaPredicted RBP8.64□□□□□ -1.03
RPGR-204ENST00000464437 CANXP27824 592 aaKnown RBP8.64□□□□□ -1.03
RPGR-204ENST00000464437 PNISRQ8TF01 805 aaKnown RBP8.64□□□□□ -1.03
RPGR-204ENST00000464437 ZDHHC16Q969W1 377 aa8.64□□□□□ -1.03
RPGR-204ENST00000464437 SYT17Q9BSW7 474 aa8.64□□□□□ -1.03
RPGR-204ENST00000464437 TEX13AQ9BXU3 409 aaPredicted RBP8.64□□□□□ -1.03
RPGR-204ENST00000464437 TSHZ2Q9NRE2 1034 aa8.64□□□□□ -1.03
RPGR-204ENST00000464437 MIS18AQ9NYP9 233 aa8.64□□□□□ -1.03
RPGR-204ENST00000464437 ZBTB1Q9Y2K1 713 aa8.64□□□□□ -1.03
RPGR-204ENST00000464437 MYH14Q7Z406 1995 aaKnown RBP8.64□□□□□ -1.03
RPGR-204ENST00000464437 USP42Q9H9J4 1324 aaKnown RBP8.63□□□□□ -1.03
RPGR-204ENST00000464437 PROX2Q3B8N5 592 aa8.63□□□□□ -1.03
RPGR-204ENST00000464437 CCDC184Q52MB2 194 aa8.63□□□□□ -1.03
RPGR-204ENST00000464437 HS6ST3Q8IZP7 471 aa8.63□□□□□ -1.03
RPGR-204ENST00000464437 NLGN1Q8N2Q7 840 aa8.63□□□□□ -1.03
RPGR-204ENST00000464437 SPRYD3Q8NCJ5 442 aa8.63□□□□□ -1.03
RPGR-204ENST00000464437 MRS2Q9HD23 443 aa8.63□□□□□ -1.03
RPGR-204ENST00000464437 ZNF330Q9Y3S2 320 aaPredicted RBP8.63□□□□□ -1.03
RPGR-204ENST00000464437 KDM3BQ7LBC6 1761 aa8.63□□□□□ -1.03
RPGR-204ENST00000464437 ZPR1O75312 459 aa8.62□□□□□ -1.03
RPGR-204ENST00000464437 MMP10P09238 476 aa8.62□□□□□ -1.03
RPGR-204ENST00000464437 SNRPA1P09661 255 aaKnown RBP8.62□□□□□ -1.03
RPGR-204ENST00000464437 GYS1P13807 737 aa8.62□□□□□ -1.03
RPGR-204ENST00000464437 PPP1R15BQ5SWA1 713 aa8.62□□□□□ -1.03
RPGR-204ENST00000464437 NPM2Q86SE8 214 aaKnown RBP8.62□□□□□ -1.03
RPGR-204ENST00000464437 SRP68Q9UHB9 627 aaKnown RBP8.62□□□□□ -1.03
RPGR-204ENST00000464437 TSPYL4Q9UJ04 414 aa8.62□□□□□ -1.03
RPGR-204ENST00000464437 PRAMEF22A3QJZ6 481 aa8.61□□□□□ -1.03
RPGR-204ENST00000464437 A1BGP04217 495 aa8.61□□□□□ -1.03
RPGR-204ENST00000464437 NLGN2Q8NFZ4 835 aa8.61□□□□□ -1.03
RPGR-204ENST00000464437 USP16Q9Y5T5 823 aa8.61□□□□□ -1.03
RPGR-204ENST00000464437 LAMB4A4D0S4 1761 aa8.61□□□□□ -1.03
RPGR-204ENST00000464437 A0A087WZG4 1122 aa8.6□□□□□ -1.03
RPGR-204ENST00000464437 APAF1O14727 1248 aa8.6□□□□□ -1.03
RPGR-204ENST00000464437 EVI5O60447 810 aa8.6□□□□□ -1.03
RPGR-204ENST00000464437 IL6STP40189 918 aaPredicted RBP8.6□□□□□ -1.03
RPGR-204ENST00000464437 PIP4K2AP48426 406 aaPredicted RBP8.6□□□□□ -1.03
RPGR-204ENST00000464437 EIF5P55010 431 aaKnown RBP8.6□□□□□ -1.03
RPGR-204ENST00000464437 EIF4A1P60842 406 aaKnown RBP8.6□□□□□ -1.03
RPGR-204ENST00000464437 USPL1Q5W0Q7 1092 aa8.6□□□□□ -1.03
RPGR-204ENST00000464437 NARFQ9UHQ1 456 aa8.6□□□□□ -1.03
RPGR-204ENST00000464437 LAS1LQ9Y4W2 734 aaKnown RBP8.6□□□□□ -1.03
RPGR-204ENST00000464437 CD2APQ9Y5K6 639 aa8.6□□□□□ -1.03
RPGR-204ENST00000464437 PARP3Q9Y6F1 533 aa8.6□□□□□ -1.03
RPGR-204ENST00000464437 SCN7AQ01118 1682 aa8.59□□□□□ -1.03
RPGR-204ENST00000464437 GIGYF1O75420 1035 aaPredicted RBP8.59□□□□□ -1.03
RPGR-204ENST00000464437 KCNC4Q03721 635 aa8.59□□□□□ -1.03
RPGR-204ENST00000464437 TRAF7Q6Q0C0 670 aa8.59□□□□□ -1.03
RPGR-204ENST00000464437 BABAM1Q9NWV8 329 aa8.59□□□□□ -1.03
RPGR-204ENST00000464437 WBP1LQ9NX94 342 aa8.59□□□□□ -1.03
RPGR-204ENST00000464437 RABGEF1Q9UJ41 708 aa8.59□□□□□ -1.03
RPGR-204ENST00000464437 SOWAHBA6NEL2 793 aa8.58□□□□□ -1.04
RPGR-204ENST00000464437 GFRA3O60609 400 aa8.58□□□□□ -1.04
RPGR-204ENST00000464437 GPR162Q16538 588 aa8.58□□□□□ -1.04
RPGR-204ENST00000464437 DZIP3Q86Y13 1208 aaKnown RBP8.58□□□□□ -1.04
RPGR-204ENST00000464437 CRISPLD2Q9H0B8 497 aa8.58□□□□□ -1.04
RPGR-204ENST00000464437 TBC1D2BQ9UPU7 963 aa8.58□□□□□ -1.04
RPGR-204ENST00000464437 C10orf71Q711Q0 1435 aa8.57□□□□□ -1.04
RPGR-204ENST00000464437 SENP3-EIF4A1A0A087X0R7 540 aa8.57□□□□□ -1.04
RPGR-204ENST00000464437 PPP1R3GB7ZBB8 358 aa8.57□□□□□ -1.04
RPGR-204ENST00000464437 POLRMTO00411 1230 aaKnown RBP8.57□□□□□ -1.04
RPGR-204ENST00000464437 COL9A1P20849 921 aa8.57□□□□□ -1.04
RPGR-204ENST00000464437 CALD1Q05682 793 aaKnown RBP8.57□□□□□ -1.04
RPGR-204ENST00000464437 DDR1Q08345 913 aa8.57□□□□□ -1.04
RPGR-204ENST00000464437 NFIXQ14938 502 aa8.57□□□□□ -1.04
RPGR-204ENST00000464437 LAPTM4AQ15012 233 aa8.57□□□□□ -1.04
RPGR-204ENST00000464437 BICDL1Q6ZP65 573 aa8.57□□□□□ -1.04
RPGR-204ENST00000464437 BCORQ6W2J9 1755 aa8.56□□□□□ -1.04
RPGR-204ENST00000464437 NBPF26B4DH59 902 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms