RNA–Protein interactions for RNA: ENST00000464408.3

ALMS1-202, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 5

Gene ALMS1, Length 640 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-202ENST00000464408 SCN4AP35499 1836 aa19.03■□□□□ 0.64
ALMS1-202ENST00000464408 LMOD3Q0VAK6 560 aa19.03■□□□□ 0.64
ALMS1-202ENST00000464408 IFFO2Q5TF58 517 aa19.03■□□□□ 0.64
ALMS1-202ENST00000464408 RTKN2Q8IZC4 609 aa19.03■□□□□ 0.64
ALMS1-202ENST00000464408 SYNE4Q8N205 404 aa19.03■□□□□ 0.64
ALMS1-202ENST00000464408 BABAM1Q9NWV8 329 aa19.03■□□□□ 0.64
ALMS1-202ENST00000464408 ADAMTS8Q9UP79 889 aa19.03■□□□□ 0.64
ALMS1-202ENST00000464408 RUNDC1Q96C34 613 aa19.02■□□□□ 0.64
ALMS1-202ENST00000464408 LAS1LQ9Y4W2 734 aaKnown RBP19.02■□□□□ 0.64
ALMS1-202ENST00000464408 CHL1O00533 1208 aa19.01■□□□□ 0.63
ALMS1-202ENST00000464408 HOXA10P31260 410 aaPredicted RBP19.01■□□□□ 0.63
ALMS1-202ENST00000464408 IARSP41252 1262 aaKnown RBP19.01■□□□□ 0.63
ALMS1-202ENST00000464408 AIMP1Q12904 312 aaKnown RBP19.01■□□□□ 0.63
ALMS1-202ENST00000464408 WDR43Q15061 677 aaKnown RBP eCLIP19.01■□□□□ 0.63
ALMS1-202ENST00000464408 XAGE3Q8WTP9 111 aa19.01■□□□□ 0.63
ALMS1-202ENST00000464408 RPGRQ92834 1020 aaKnown RBP19.01■□□□□ 0.63
ALMS1-202ENST00000464408 ZNF428Q96B54 188 aa19.01■□□□□ 0.63
ALMS1-202ENST00000464408 TCERG1O14776 1098 aaKnown RBP19■□□□□ 0.63
ALMS1-202ENST00000464408 COPS6Q7L5N1 327 aa19■□□□□ 0.63
ALMS1-202ENST00000464408 JMYQ8N9B5 988 aa19■□□□□ 0.63
ALMS1-202ENST00000464408 L3MBTL3Q96JM7 780 aaPredicted RBP19■□□□□ 0.63
ALMS1-202ENST00000464408 TAF1P21675 1872 aa19■□□□□ 0.63
ALMS1-202ENST00000464408 CHADLQ6NUI6 762 aa18.99■□□□□ 0.63
ALMS1-202ENST00000464408 PRKRIP1Q9H875 184 aaPredicted RBP18.99■□□□□ 0.63
ALMS1-202ENST00000464408 PARP10Q53GL7 1025 aa18.98■□□□□ 0.63
ALMS1-202ENST00000464408 PPP1R42Q7Z4L9 355 aa18.98■□□□□ 0.63
ALMS1-202ENST00000464408 PSMD1Q99460 953 aa18.98■□□□□ 0.63
ALMS1-202ENST00000464408 UTP14AQ9BVJ6 771 aaKnown RBP18.98■□□□□ 0.63
ALMS1-202ENST00000464408 TAF1DQ9H5J8 278 aaPredicted RBP18.98■□□□□ 0.63
ALMS1-202ENST00000464408 CHPF2Q9P2E5 772 aa18.98■□□□□ 0.63
ALMS1-202ENST00000464408 ADAMTSL1Q8N6G6 1762 aa18.98■□□□□ 0.63
ALMS1-202ENST00000464408 LTBP1Q14766 1721 aa18.97■□□□□ 0.63
ALMS1-202ENST00000464408 FZD9O00144 591 aa18.97■□□□□ 0.63
ALMS1-202ENST00000464408 PPEF1O14829 653 aaPredicted RBP18.97■□□□□ 0.63
ALMS1-202ENST00000464408 RBM17Q96I25 401 aaKnown RBP18.97■□□□□ 0.63
ALMS1-202ENST00000464408 CRAMP1Q96RY5 1269 aa18.97■□□□□ 0.63
ALMS1-202ENST00000464408 NLRP10Q86W26 655 aa18.96■□□□□ 0.63
ALMS1-202ENST00000464408 DDX21Q9NR30 783 aaKnown RBP eCLIP18.96■□□□□ 0.63
ALMS1-202ENST00000464408 RNF123Q5XPI4 1314 aa18.96■□□□□ 0.63
ALMS1-202ENST00000464408 DDX60Q8IY21 1712 aaKnown RBP18.95■□□□□ 0.62
ALMS1-202ENST00000464408 IQCA1LA6NCM1 817 aa18.95■□□□□ 0.62
ALMS1-202ENST00000464408 HCLS1P14317 486 aaPredicted RBP18.95■□□□□ 0.62
ALMS1-202ENST00000464408 SLC10A5Q5PT55 438 aa18.95■□□□□ 0.62
ALMS1-202ENST00000464408 ABCC4O15439 1325 aa18.95■□□□□ 0.62
ALMS1-202ENST00000464408 EAPPQ56P03 285 aaPredicted RBP18.94■□□□□ 0.62
ALMS1-202ENST00000464408 HDGFL1Q5TGJ6 251 aa18.94■□□□□ 0.62
ALMS1-202ENST00000464408 CC2D2BQ6DHV5 1058 aa18.94■□□□□ 0.62
ALMS1-202ENST00000464408 NLRP3Q96P20 1036 aa18.94■□□□□ 0.62
ALMS1-202ENST00000464408 HACL1Q9UJ83 578 aa18.94■□□□□ 0.62
ALMS1-202ENST00000464408 TCIRG1Q13488 830 aa18.93■□□□□ 0.62
ALMS1-202ENST00000464408 LDHDQ86WU2 507 aa18.93■□□□□ 0.62
ALMS1-202ENST00000464408 MBIPQ9NS73 344 aa18.93■□□□□ 0.62
ALMS1-202ENST00000464408 COL4A1P02462 1669 aa18.92■□□□□ 0.62
ALMS1-202ENST00000464408 EPHX2P34913 555 aa18.92■□□□□ 0.62
ALMS1-202ENST00000464408 JDP2Q8WYK2 163 aa18.92■□□□□ 0.62
ALMS1-202ENST00000464408 TRMT112Q9UI30 125 aaKnown RBP18.92■□□□□ 0.62
ALMS1-202ENST00000464408 GJA3Q9Y6H8 435 aa18.92■□□□□ 0.62
ALMS1-202ENST00000464408 PASKQ96RG2 1323 aa18.92■□□□□ 0.62
ALMS1-202ENST00000464408 APAF1O14727 1248 aa18.91■□□□□ 0.62
ALMS1-202ENST00000464408 HSP90AB3PQ58FF7 597 aa18.91■□□□□ 0.62
ALMS1-202ENST00000464408 DUSP27Q5VZP5 1158 aa18.91■□□□□ 0.62
ALMS1-202ENST00000464408 GPC2Q8N158 579 aa18.91■□□□□ 0.62
ALMS1-202ENST00000464408 LARGE2Q8N3Y3 721 aa18.91■□□□□ 0.62
ALMS1-202ENST00000464408 CFAP44Q96MT7 982 aa18.91■□□□□ 0.62
ALMS1-202ENST00000464408 ATP6V0A2Q9Y487 856 aa18.91■□□□□ 0.62
ALMS1-202ENST00000464408 ITGBL1O95965 494 aaPredicted RBP18.9■□□□□ 0.62
ALMS1-202ENST00000464408 ZNF853P0CG23 659 aa18.9■□□□□ 0.62
ALMS1-202ENST00000464408 AOC3Q16853 763 aa18.9■□□□□ 0.62
ALMS1-202ENST00000464408 COL13A1Q5TAT6 717 aaPredicted RBP18.9■□□□□ 0.62
ALMS1-202ENST00000464408 CREBZFQ9NS37 354 aa18.9■□□□□ 0.62
ALMS1-202ENST00000464408 MKRN1Q9UHC7 482 aaKnown RBP18.9■□□□□ 0.62
ALMS1-202ENST00000464408 ATP5J2-PTCD1G3V325 749 aa18.89■□□□□ 0.61
ALMS1-202ENST00000464408 HOXB7P09629 217 aa18.89■□□□□ 0.61
ALMS1-202ENST00000464408 EIF6P56537 245 aaKnown RBP18.89■□□□□ 0.61
ALMS1-202ENST00000464408 CCDC184Q52MB2 194 aa18.89■□□□□ 0.61
ALMS1-202ENST00000464408 PLBD2Q8NHP8 589 aa18.89■□□□□ 0.61
ALMS1-202ENST00000464408 CLEC11AQ9Y240 323 aa18.89■□□□□ 0.61
ALMS1-202ENST00000464408 PPIP5K2O43314 1243 aa18.88■□□□□ 0.61
ALMS1-202ENST00000464408 SCNN1DP51172 638 aa18.88■□□□□ 0.61
ALMS1-202ENST00000464408 MAP1SQ66K74 1059 aaPredicted RBP18.88■□□□□ 0.61
ALMS1-202ENST00000464408 ANKRD13DQ6ZTN6 518 aa18.88■□□□□ 0.61
ALMS1-202ENST00000464408 ISCA1Q9BUE6 129 aa18.88■□□□□ 0.61
ALMS1-202ENST00000464408 DBF4Q9UBU7 674 aaPredicted RBP18.88■□□□□ 0.61
ALMS1-202ENST00000464408 SH3TC1Q8TE82 1336 aa18.88■□□□□ 0.61
ALMS1-202ENST00000464408 DUOX1Q9NRD9 1551 aa18.88■□□□□ 0.61
ALMS1-202ENST00000464408 LRRC37AA6NMS7 1700 aa18.88■□□□□ 0.61
ALMS1-202ENST00000464408 ELL2O00472 640 aaPredicted RBP18.87■□□□□ 0.61
ALMS1-202ENST00000464408 HSPA1AP0DMV8 641 aaKnown RBP18.87■□□□□ 0.61
ALMS1-202ENST00000464408 HSPA1BP0DMV9 641 aaKnown RBP18.87■□□□□ 0.61
ALMS1-202ENST00000464408 EPS15P42566 896 aa18.87■□□□□ 0.61
ALMS1-202ENST00000464408 GRIPAP1Q4V328 841 aa18.87■□□□□ 0.61
ALMS1-202ENST00000464408 NIM1KQ8IY84 436 aa18.87■□□□□ 0.61
ALMS1-202ENST00000464408 FAM89AQ96GI7 184 aa18.87■□□□□ 0.61
ALMS1-202ENST00000464408 RTL5Q5HYW3 569 aaPredicted RBP18.86■□□□□ 0.61
ALMS1-202ENST00000464408 IFT57Q9NWB7 429 aa18.86■□□□□ 0.61
ALMS1-202ENST00000464408 GRAPQ13588 217 aa18.85■□□□□ 0.61
ALMS1-202ENST00000464408 DDX46Q7L014 1031 aaKnown RBP18.85■□□□□ 0.61
ALMS1-202ENST00000464408 SP8Q8IXZ3 490 aa18.85■□□□□ 0.61
ALMS1-202ENST00000464408 C8orf58Q8NAV2 365 aa18.85■□□□□ 0.61
ALMS1-202ENST00000464408 GRAPLQ8TC17 118 aaPredicted RBP18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms